RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 MAGEA11P43364 429 aa29.02■■■□□ 2.24
USP42-204ENST00000451154 ZNF268Q14587 947 aaPredicted RBP29.02■■■□□ 2.24
USP42-204ENST00000451154 FSTL4Q6MZW2 842 aa29.02■■■□□ 2.24
USP42-204ENST00000451154 PKN3Q6P5Z2 889 aa29.02■■■□□ 2.24
USP42-204ENST00000451154 C4orf50Q6ZRC1 276 aa29.02■■■□□ 2.24
USP42-204ENST00000451154 UNC13DQ70J99 1090 aa29.02■■■□□ 2.24
USP42-204ENST00000451154 LONP2Q86WA8 852 aa29.02■■■□□ 2.24
USP42-204ENST00000451154 MYLPFQ96A32 169 aa29.02■■■□□ 2.24
USP42-204ENST00000451154 PCDHA7Q9UN72 937 aa29.02■■■□□ 2.24
USP42-204ENST00000451154 GREB1Q4ZG55 1949 aa29.02■■■□□ 2.24
USP42-204ENST00000451154 MED19A0JLT2 244 aaPredicted RBP29.01■■■□□ 2.23
USP42-204ENST00000451154 WARSP23381 471 aaKnown RBP29.01■■■□□ 2.23
USP42-204ENST00000451154 CYP24A1Q07973 514 aa29.01■■■□□ 2.23
USP42-204ENST00000451154 EHHADHQ08426 723 aa29.01■■■□□ 2.23
USP42-204ENST00000451154 SPEM2Q0P670 501 aa29.01■■■□□ 2.23
USP42-204ENST00000451154 GRSF1Q12849 480 aaKnown RBP eCLIP29.01■■■□□ 2.23
USP42-204ENST00000451154 TMEM196Q5HYL7 178 aa29.01■■■□□ 2.23
USP42-204ENST00000451154 LAIR1Q6GTX8 287 aa29.01■■■□□ 2.23
USP42-204ENST00000451154 ARL14EPQ8N8R7 260 aaPredicted RBP29.01■■■□□ 2.23
USP42-204ENST00000451154 FNBP1Q96RU3 617 aa29.01■■■□□ 2.23
USP42-204ENST00000451154 FBRSL1Q9HCM7 1045 aaKnown RBP29.01■■■□□ 2.23
USP42-204ENST00000451154 SLC39A2Q9NP94 309 aa29.01■■■□□ 2.23
USP42-204ENST00000451154 SPTBN2O15020 2390 aa29.01■■■□□ 2.23
USP42-204ENST00000451154 TRAV19A0A0A6YYK7 116 aa29■■■□□ 2.23
USP42-204ENST00000451154 C2orf78A6NCI8 922 aa29■■■□□ 2.23
USP42-204ENST00000451154 TRDMT1O14717 391 aaKnown RBP29■■■□□ 2.23
USP42-204ENST00000451154 GNL1P36915 607 aaPredicted RBP29■■■□□ 2.23
USP42-204ENST00000451154 GRIK1P39086 918 aa29■■■□□ 2.23
USP42-204ENST00000451154 AFMP43652 599 aa29■■■□□ 2.23
USP42-204ENST00000451154 ME1P48163 572 aa29■■■□□ 2.23
USP42-204ENST00000451154 CYP27A1Q02318 531 aa29■■■□□ 2.23
USP42-204ENST00000451154 PSMD6Q15008 389 aa29■■■□□ 2.23
USP42-204ENST00000451154 XXYLT1Q8NBI6 393 aa29■■■□□ 2.23
USP42-204ENST00000451154 MRPL45Q9BRJ2 306 aaKnown RBP29■■■□□ 2.23
USP42-204ENST00000451154 RALGAPA1Q6GYQ0 2036 aa28.99■■■□□ 2.23
USP42-204ENST00000451154 F13A1P00488 732 aa28.99■■■□□ 2.23
USP42-204ENST00000451154 CKMP06732 381 aa28.99■■■□□ 2.23
USP42-204ENST00000451154 USP17L7P0C7H9 530 aa28.99■■■□□ 2.23
USP42-204ENST00000451154 GALK1P51570 392 aa28.99■■■□□ 2.23
USP42-204ENST00000451154 FAM160A1Q05DH4 1040 aa28.99■■■□□ 2.23
USP42-204ENST00000451154 MTF1Q14872 753 aa28.99■■■□□ 2.23
USP42-204ENST00000451154 PDGFRLQ15198 375 aa28.99■■■□□ 2.23
USP42-204ENST00000451154 ZNF516Q92618 1163 aa28.99■■■□□ 2.23
USP42-204ENST00000451154 CGRRF1Q99675 332 aa28.99■■■□□ 2.23
USP42-204ENST00000451154 SNX25Q9H3E2 840 aa28.99■■■□□ 2.23
USP42-204ENST00000451154 MAGEF1Q9HAY2 307 aa28.99■■■□□ 2.23
USP42-204ENST00000451154 DUS2Q9NX74 493 aaKnown RBP28.99■■■□□ 2.23
USP42-204ENST00000451154 FAM13BQ9NYF5 915 aa28.99■■■□□ 2.23
USP42-204ENST00000451154 GCNT4Q9P109 453 aa28.99■■■□□ 2.23
USP42-204ENST00000451154 NME7Q9Y5B8 376 aa28.99■■■□□ 2.23
USP42-204ENST00000451154 EGFP01133 1207 aa28.98■■■□□ 2.23
USP42-204ENST00000451154 HSP90AA1P07900 732 aaKnown RBP28.98■■■□□ 2.23
USP42-204ENST00000451154 CNR2P34972 360 aa28.98■■■□□ 2.23
USP42-204ENST00000451154 CUL4BQ13620 913 aa28.98■■■□□ 2.23
USP42-204ENST00000451154 MAPRE1Q15691 268 aaKnown RBP28.98■■■□□ 2.23
USP42-204ENST00000451154 ZNF77Q15935 545 aa28.98■■■□□ 2.23
USP42-204ENST00000451154 NAIF1Q69YI7 327 aaPredicted RBP28.98■■■□□ 2.23
USP42-204ENST00000451154 VSTM1Q6UX27 236 aa28.98■■■□□ 2.23
USP42-204ENST00000451154 HS2ST1Q7LGA3 356 aa28.98■■■□□ 2.23
USP42-204ENST00000451154 HSCBQ8IWL3 235 aa28.98■■■□□ 2.23
USP42-204ENST00000451154 GRAMD1CQ8IYS0 662 aa28.98■■■□□ 2.23
USP42-204ENST00000451154 FSIP1Q8NA03 581 aa28.98■■■□□ 2.23
USP42-204ENST00000451154 SPATA17Q96L03 361 aa28.98■■■□□ 2.23
USP42-204ENST00000451154 NCOR2Q9Y618 2525 aa28.97■■■□□ 2.23
USP42-204ENST00000451154 UBE4BO95155 1302 aa28.97■■■□□ 2.23
USP42-204ENST00000451154 RETP07949 1114 aa28.97■■■□□ 2.23
USP42-204ENST00000451154 HDCP19113 662 aa28.97■■■□□ 2.23
USP42-204ENST00000451154 HOXA6P31267 233 aa28.97■■■□□ 2.23
USP42-204ENST00000451154 USP46P62068 366 aa28.97■■■□□ 2.23
USP42-204ENST00000451154 SNRPFP62306 86 aaKnown RBP28.97■■■□□ 2.23
USP42-204ENST00000451154 AMPD2Q01433 879 aa28.97■■■□□ 2.23
USP42-204ENST00000451154 LMNB2Q03252 620 aa28.97■■■□□ 2.23
USP42-204ENST00000451154 PKP1Q13835 747 aa28.97■■■□□ 2.23
USP42-204ENST00000451154 WDR72Q3MJ13 1102 aa28.97■■■□□ 2.23
USP42-204ENST00000451154 MDH1BQ5I0G3 518 aa28.97■■■□□ 2.23
USP42-204ENST00000451154 RESP18Q5W5W9 173 aa28.97■■■□□ 2.23
USP42-204ENST00000451154 SPRYD3Q8NCJ5 442 aa28.97■■■□□ 2.23
USP42-204ENST00000451154 OR6B3Q8NGW1 331 aa28.97■■■□□ 2.23
USP42-204ENST00000451154 MYCBPAPQ8TBZ2 947 aa28.97■■■□□ 2.23
USP42-204ENST00000451154 OSCP1Q8WVF1 389 aa28.97■■■□□ 2.23
USP42-204ENST00000451154 PCED1BQ96HM7 432 aa28.97■■■□□ 2.23
USP42-204ENST00000451154 GZF1Q9H116 711 aaPredicted RBP28.97■■■□□ 2.23
USP42-204ENST00000451154 ECT2Q9H8V3 914 aa28.97■■■□□ 2.23
USP42-204ENST00000451154 POLR3BQ9NW08 1133 aaPredicted RBP28.97■■■□□ 2.23
USP42-204ENST00000451154 WNT6Q9Y6F9 365 aa28.97■■■□□ 2.23
USP42-204ENST00000451154 PTPRDP23468 1912 aa28.96■■■□□ 2.23
USP42-204ENST00000451154 PVALEFA0A1B0GWK0 134 aa28.96■■■□□ 2.23
USP42-204ENST00000451154 PRR5-ARHGAP8B1AHC4 643 aa28.96■■■□□ 2.23
USP42-204ENST00000451154 GJA4P35212 333 aa28.96■■■□□ 2.23
USP42-204ENST00000451154 PXNP49023 591 aaPredicted RBP28.96■■■□□ 2.23
USP42-204ENST00000451154 ATXN1P54253 815 aaKnown RBP28.96■■■□□ 2.23
USP42-204ENST00000451154 ARHGAP8P85298 464 aa28.96■■■□□ 2.23
USP42-204ENST00000451154 WDR5BQ86VZ2 330 aa28.96■■■□□ 2.23
USP42-204ENST00000451154 SH3RF2Q8TEC5 729 aa28.96■■■□□ 2.23
USP42-204ENST00000451154 LINC00597Q9H2U6 94 aa28.96■■■□□ 2.23
USP42-204ENST00000451154 TACC1O75410 805 aa28.95■■■□□ 2.22
USP42-204ENST00000451154 PDIA4P13667 645 aaKnown RBP28.95■■■□□ 2.22
USP42-204ENST00000451154 IFNAR2P48551 515 aa28.95■■■□□ 2.22
USP42-204ENST00000451154 MYL6P60660 151 aa28.95■■■□□ 2.22
USP42-204ENST00000451154 KCNB1Q14721 858 aa28.95■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms