RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 NSUN6Q8TEA1 469 aaKnown RBP5.42□□□□□ -1.54
GTF3C3-207ENST00000451088 PDLIM2Q96JY6 352 aa5.42□□□□□ -1.54
GTF3C3-207ENST00000451088 CLPTM1LQ96KA5 538 aa5.42□□□□□ -1.54
GTF3C3-207ENST00000451088 AIFM2Q9BRQ8 373 aa5.42□□□□□ -1.54
GTF3C3-207ENST00000451088 TLR10Q9BXR5 811 aa5.42□□□□□ -1.54
GTF3C3-207ENST00000451088 DICER1Q9UPY3 1922 aaKnown RBP5.42□□□□□ -1.54
GTF3C3-207ENST00000451088 TOGARAM1Q9Y4F4 1720 aa5.42□□□□□ -1.54
GTF3C3-207ENST00000451088 TNKSO95271 1327 aa5.42□□□□□ -1.54
GTF3C3-207ENST00000451088 PALLDQ8WX93 1383 aa5.42□□□□□ -1.54
GTF3C3-207ENST00000451088 DDNO94850 711 aaPredicted RBP5.41□□□□□ -1.54
GTF3C3-207ENST00000451088 CD1AP06126 327 aa5.41□□□□□ -1.54
GTF3C3-207ENST00000451088 GYS1P13807 737 aa5.41□□□□□ -1.54
GTF3C3-207ENST00000451088 RARRES1P49788 294 aa5.41□□□□□ -1.54
GTF3C3-207ENST00000451088 SIM1P81133 766 aaPredicted RBP5.41□□□□□ -1.54
GTF3C3-207ENST00000451088 ZNF362Q5T0B9 420 aaPredicted RBP5.41□□□□□ -1.54
GTF3C3-207ENST00000451088 UTP14CQ5TAP6 766 aaKnown RBP5.41□□□□□ -1.54
GTF3C3-207ENST00000451088 KIAA0895LQ68EN5 471 aa5.41□□□□□ -1.54
GTF3C3-207ENST00000451088 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.41□□□□□ -1.54
GTF3C3-207ENST00000451088 CAGE1Q8TC20 777 aa5.41□□□□□ -1.54
GTF3C3-207ENST00000451088 SSH3Q8TE77 659 aa5.41□□□□□ -1.54
GTF3C3-207ENST00000451088 IP6K1Q92551 441 aa5.41□□□□□ -1.54
GTF3C3-207ENST00000451088 KAT5Q92993 513 aa5.41□□□□□ -1.54
GTF3C3-207ENST00000451088 LTV1Q96GA3 475 aaPredicted RBP5.41□□□□□ -1.54
GTF3C3-207ENST00000451088 KLHL32Q96NJ5 620 aa5.41□□□□□ -1.54
GTF3C3-207ENST00000451088 SLC12A5Q9H2X9 1139 aa5.41□□□□□ -1.54
GTF3C3-207ENST00000451088 PTGFRNQ9P2B2 879 aa5.41□□□□□ -1.54
GTF3C3-207ENST00000451088 CTTNBP2NLQ9P2B4 639 aa5.41□□□□□ -1.54
GTF3C3-207ENST00000451088 ABT1Q9ULW3 272 aaKnown RBP5.41□□□□□ -1.54
GTF3C3-207ENST00000451088 NEU2Q9Y3R4 380 aa5.41□□□□□ -1.54
GTF3C3-207ENST00000451088 CFAP20Q9Y6A4 193 aaKnown RBP5.41□□□□□ -1.54
GTF3C3-207ENST00000451088 KIAA0100Q14667 2235 aaKnown RBP5.41□□□□□ -1.54
GTF3C3-207ENST00000451088 NFAT5O94916 1531 aa5.41□□□□□ -1.54
GTF3C3-207ENST00000451088 A0A1W2PP64 1363 aa5.41□□□□□ -1.54
GTF3C3-207ENST00000451088 SMG6Q86US8 1419 aaKnown RBP5.4□□□□□ -1.54
GTF3C3-207ENST00000451088 NSD3Q9BZ95 1437 aa5.4□□□□□ -1.54
GTF3C3-207ENST00000451088 ITGB4P16144 1822 aa5.4□□□□□ -1.54
GTF3C3-207ENST00000451088 TRGV11A0A075B6L2 103 aa5.4□□□□□ -1.54
GTF3C3-207ENST00000451088 PRAMEF33A0A0G2JMD5 474 aa5.4□□□□□ -1.54
GTF3C3-207ENST00000451088 PRAMEF10O60809 474 aa5.4□□□□□ -1.54
GTF3C3-207ENST00000451088 RPLP2P05387 115 aaKnown RBP5.4□□□□□ -1.54
GTF3C3-207ENST00000451088 KCNA2P16389 499 aa5.4□□□□□ -1.54
GTF3C3-207ENST00000451088 MAP2K2P36507 400 aa5.4□□□□□ -1.54
GTF3C3-207ENST00000451088 AMPHP49418 695 aa5.4□□□□□ -1.54
GTF3C3-207ENST00000451088 DSC2Q02487 901 aa5.4□□□□□ -1.54
GTF3C3-207ENST00000451088 ITPK1Q13572 414 aa5.4□□□□□ -1.54
GTF3C3-207ENST00000451088 PTPN21Q16825 1174 aa5.4□□□□□ -1.54
GTF3C3-207ENST00000451088 FBXO42Q6P3S6 717 aa5.4□□□□□ -1.54
GTF3C3-207ENST00000451088 RD3Q7Z3Z2 195 aa5.4□□□□□ -1.54
GTF3C3-207ENST00000451088 CNTROBQ8N137 903 aa5.4□□□□□ -1.54
GTF3C3-207ENST00000451088 SLC17A8Q8NDX2 589 aa5.4□□□□□ -1.54
GTF3C3-207ENST00000451088 PIGBQ92521 554 aa5.4□□□□□ -1.54
GTF3C3-207ENST00000451088 VOPP1Q96AW1 172 aa5.4□□□□□ -1.54
GTF3C3-207ENST00000451088 CAPNS2Q96L46 248 aa5.4□□□□□ -1.54
GTF3C3-207ENST00000451088 PACSIN1Q9BY11 444 aa5.4□□□□□ -1.54
GTF3C3-207ENST00000451088 ASPSCR1Q9BZE9 553 aa5.4□□□□□ -1.54
GTF3C3-207ENST00000451088 TLK1Q9UKI8 766 aa5.4□□□□□ -1.54
GTF3C3-207ENST00000451088 DMTF1Q9Y222 760 aa5.4□□□□□ -1.54
GTF3C3-207ENST00000451088 CGNL1Q0VF96 1302 aa5.4□□□□□ -1.55
GTF3C3-207ENST00000451088 CLSPNQ9HAW4 1339 aa5.4□□□□□ -1.55
GTF3C3-207ENST00000451088 RTL1A6NKG5 1358 aa5.4□□□□□ -1.55
GTF3C3-207ENST00000451088 MGST3O14880 152 aa5.39□□□□□ -1.55
GTF3C3-207ENST00000451088 PROM1O43490 865 aa5.39□□□□□ -1.55
GTF3C3-207ENST00000451088 ZRANB2O95218 330 aaKnown RBP eCLIP5.39□□□□□ -1.55
GTF3C3-207ENST00000451088 ANXA1P04083 346 aa5.39□□□□□ -1.55
GTF3C3-207ENST00000451088 CENPBP07199 599 aaPredicted RBP5.39□□□□□ -1.55
GTF3C3-207ENST00000451088 SRGNP10124 158 aa5.39□□□□□ -1.55
GTF3C3-207ENST00000451088 RFC4P35249 363 aa5.39□□□□□ -1.55
GTF3C3-207ENST00000451088 PTH2RP49190 550 aa5.39□□□□□ -1.55
GTF3C3-207ENST00000451088 FXR1P51114 621 aaKnown RBP eCLIP5.39□□□□□ -1.55
GTF3C3-207ENST00000451088 MRPS35P82673 323 aaKnown RBP5.39□□□□□ -1.55
GTF3C3-207ENST00000451088 GRM1Q13255 1194 aa5.39□□□□□ -1.55
GTF3C3-207ENST00000451088 CCDC142Q17RM4 750 aa5.39□□□□□ -1.55
GTF3C3-207ENST00000451088 GADL1Q6ZQY3 521 aa5.39□□□□□ -1.55
GTF3C3-207ENST00000451088 TMPRSS9Q7Z410 1059 aa5.39□□□□□ -1.55
GTF3C3-207ENST00000451088 CLNKQ7Z7G1 428 aa5.39□□□□□ -1.55
GTF3C3-207ENST00000451088 TTC7BQ86TV6 843 aa5.39□□□□□ -1.55
GTF3C3-207ENST00000451088 PNMA8AQ86V59 439 aaPredicted RBP5.39□□□□□ -1.55
GTF3C3-207ENST00000451088 TESK2Q96S53 571 aa5.39□□□□□ -1.55
GTF3C3-207ENST00000451088 TAF1DQ9H5J8 278 aaPredicted RBP5.39□□□□□ -1.55
GTF3C3-207ENST00000451088 PCDH12Q9NPG4 1184 aa5.39□□□□□ -1.55
GTF3C3-207ENST00000451088 SIDT1Q9NXL6 827 aaKnown RBP5.39□□□□□ -1.55
GTF3C3-207ENST00000451088 SLC45A2Q9UMX9 530 aa5.39□□□□□ -1.55
GTF3C3-207ENST00000451088 CDYLQ9Y232 598 aa5.39□□□□□ -1.55
GTF3C3-207ENST00000451088 SPEF1Q9Y4P9 236 aa5.39□□□□□ -1.55
GTF3C3-207ENST00000451088 MAP2P11137 1827 aaKnown RBP5.39□□□□□ -1.55
GTF3C3-207ENST00000451088 CD163L1Q9NR16 1453 aa5.39□□□□□ -1.55
GTF3C3-207ENST00000451088 C4AP0C0L4 1744 aa5.38□□□□□ -1.55
GTF3C3-207ENST00000451088 MON2Q7Z3U7 1717 aa5.38□□□□□ -1.55
GTF3C3-207ENST00000451088 LTN1O94822 1766 aa5.38□□□□□ -1.55
GTF3C3-207ENST00000451088 RGPD2P0DJD1 1756 aa5.38□□□□□ -1.55
GTF3C3-207ENST00000451088 NT5C1B-RDH14C9J2C7 533 aa5.38□□□□□ -1.55
GTF3C3-207ENST00000451088 CA12O43570 354 aa5.38□□□□□ -1.55
GTF3C3-207ENST00000451088 SUN1O94901 812 aa5.38□□□□□ -1.55
GTF3C3-207ENST00000451088 GATA3P23771 443 aa5.38□□□□□ -1.55
GTF3C3-207ENST00000451088 FOLR3P41439 243 aa5.38□□□□□ -1.55
GTF3C3-207ENST00000451088 CACNA2D1P54289 1103 aa5.38□□□□□ -1.55
GTF3C3-207ENST00000451088 ELLP55199 621 aaPredicted RBP5.38□□□□□ -1.55
GTF3C3-207ENST00000451088 RPS7P62081 194 aaKnown RBP5.38□□□□□ -1.55
GTF3C3-207ENST00000451088 POU6F2P78424 691 aaPredicted RBP5.38□□□□□ -1.55
GTF3C3-207ENST00000451088 ZNF844Q08AG5 666 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms