RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 SFXN1Q9H9B4 322 aa13.83□□□□□ -0.2
VPS33A-202ENST00000451053 PRDM6Q9NQX0 595 aa13.83□□□□□ -0.2
VPS33A-202ENST00000451053 KRT82Q9NSB4 513 aa13.83□□□□□ -0.2
VPS33A-202ENST00000451053 HSFX1Q9UBD0 423 aa13.83□□□□□ -0.2
VPS33A-202ENST00000451053 DPP7Q9UHL4 492 aa13.83□□□□□ -0.2
VPS33A-202ENST00000451053 PTPRDP23468 1912 aa13.83□□□□□ -0.2
VPS33A-202ENST00000451053 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.82□□□□□ -0.2
VPS33A-202ENST00000451053 CCDC195A0A1B0GUA6 201 aa13.82□□□□□ -0.2
VPS33A-202ENST00000451053 H3BQ06 376 aaPredicted RBP13.82□□□□□ -0.2
VPS33A-202ENST00000451053 CCL16O15467 120 aa13.82□□□□□ -0.2
VPS33A-202ENST00000451053 MFAP3LO75121 409 aa13.82□□□□□ -0.2
VPS33A-202ENST00000451053 VDRP11473 427 aa13.82□□□□□ -0.2
VPS33A-202ENST00000451053 CASP14P31944 242 aa13.82□□□□□ -0.2
VPS33A-202ENST00000451053 SSTR3P32745 418 aaPredicted RBP13.82□□□□□ -0.2
VPS33A-202ENST00000451053 CLCN1P35523 988 aa13.82□□□□□ -0.2
VPS33A-202ENST00000451053 SOX5P35711 763 aa13.82□□□□□ -0.2
VPS33A-202ENST00000451053 MAGEA11P43364 429 aa13.82□□□□□ -0.2
VPS33A-202ENST00000451053 TUFMP49411 452 aaKnown RBP13.82□□□□□ -0.2
VPS33A-202ENST00000451053 ZBED6P86452 979 aa13.82□□□□□ -0.2
VPS33A-202ENST00000451053 TWF1Q12792 350 aa13.82□□□□□ -0.2
VPS33A-202ENST00000451053 CLUL1Q15846 466 aa13.82□□□□□ -0.2
VPS33A-202ENST00000451053 DDR2Q16832 855 aa13.82□□□□□ -0.2
VPS33A-202ENST00000451053 GOLGA7BQ2TAP0 167 aa13.82□□□□□ -0.2
VPS33A-202ENST00000451053 SGO2Q562F6 1265 aa13.82□□□□□ -0.2
VPS33A-202ENST00000451053 SDHAF4Q5VUM1 108 aa13.82□□□□□ -0.2
VPS33A-202ENST00000451053 SMYD5Q6GMV2 418 aa13.82□□□□□ -0.2
VPS33A-202ENST00000451053 ELMSAN1Q6PJG2 1045 aa13.82□□□□□ -0.2
VPS33A-202ENST00000451053 TMC5Q6UXY8 1006 aa13.82□□□□□ -0.2
VPS33A-202ENST00000451053 CCDC186Q7Z3E2 898 aa13.82□□□□□ -0.2
VPS33A-202ENST00000451053 SCN4BQ8IWT1 228 aa13.82□□□□□ -0.2
VPS33A-202ENST00000451053 STKLD1Q8NE28 680 aa13.82□□□□□ -0.2
VPS33A-202ENST00000451053 BAP1Q92560 729 aa13.82□□□□□ -0.2
VPS33A-202ENST00000451053 HLA-CQ95604 372 aa13.82□□□□□ -0.2
VPS33A-202ENST00000451053 ZNF707Q96C28 371 aaPredicted RBP13.82□□□□□ -0.2
VPS33A-202ENST00000451053 TRIM44Q96DX7 344 aaPredicted RBP13.82□□□□□ -0.2
VPS33A-202ENST00000451053 ZDHHC7Q9NXF8 308 aa13.82□□□□□ -0.2
VPS33A-202ENST00000451053 CDH22Q9UJ99 828 aa13.82□□□□□ -0.2
VPS33A-202ENST00000451053 MYO6Q9UM54 1294 aa13.82□□□□□ -0.2
VPS33A-202ENST00000451053 ATP8B3O60423 1300 aa13.82□□□□□ -0.2
VPS33A-202ENST00000451053 F8VP50 259 aa13.81□□□□□ -0.2
VPS33A-202ENST00000451053 O00370 1275 aa13.81□□□□□ -0.2
VPS33A-202ENST00000451053 AP1G2O75843 785 aa13.81□□□□□ -0.2
VPS33A-202ENST00000451053 BEST1O76090 585 aa13.81□□□□□ -0.2
VPS33A-202ENST00000451053 GFPT2O94808 682 aa13.81□□□□□ -0.2
VPS33A-202ENST00000451053 PAPLNO95428 1278 aa13.81□□□□□ -0.2
VPS33A-202ENST00000451053 LRG1P02750 347 aa13.81□□□□□ -0.2
VPS33A-202ENST00000451053 HNRNPA1P09651 372 aaKnown RBP eCLIP13.81□□□□□ -0.2
VPS33A-202ENST00000451053 HOXB8P17481 243 aaPredicted RBP13.81□□□□□ -0.2
VPS33A-202ENST00000451053 KCNA5P22460 613 aa13.81□□□□□ -0.2
VPS33A-202ENST00000451053 GNA15P30679 374 aa13.81□□□□□ -0.2
VPS33A-202ENST00000451053 HOXA9P31269 272 aa13.81□□□□□ -0.2
VPS33A-202ENST00000451053 GRIK1P39086 918 aa13.81□□□□□ -0.2
VPS33A-202ENST00000451053 VSTM1Q6UX27 236 aa13.81□□□□□ -0.2
VPS33A-202ENST00000451053 RTL10Q7L3V2 364 aa13.81□□□□□ -0.2
VPS33A-202ENST00000451053 SLC47A2Q86VL8 602 aa13.81□□□□□ -0.2
VPS33A-202ENST00000451053 TTC30AQ86WT1 665 aa13.81□□□□□ -0.2
VPS33A-202ENST00000451053 CCDC112Q8NEF3 446 aa13.81□□□□□ -0.2
VPS33A-202ENST00000451053 CMASQ8NFW8 434 aaPredicted RBP13.81□□□□□ -0.2
VPS33A-202ENST00000451053 GPR152Q8TDT2 470 aa13.81□□□□□ -0.2
VPS33A-202ENST00000451053 GIPC2Q8TF65 315 aa13.81□□□□□ -0.2
VPS33A-202ENST00000451053 CPLX3Q8WVH0 158 aa13.81□□□□□ -0.2
VPS33A-202ENST00000451053 SMARCD1Q96GM5 515 aa13.81□□□□□ -0.2
VPS33A-202ENST00000451053 PANX2Q96RD6 677 aa13.81□□□□□ -0.2
VPS33A-202ENST00000451053 KCNK16Q96T55 309 aa13.81□□□□□ -0.2
VPS33A-202ENST00000451053 SMOQ99835 787 aa13.81□□□□□ -0.2
VPS33A-202ENST00000451053 PRKD2Q9BZL6 878 aa13.81□□□□□ -0.2
VPS33A-202ENST00000451053 S1PR5Q9H228 398 aa13.81□□□□□ -0.2
VPS33A-202ENST00000451053 ZNHIT6Q9NWK9 470 aaKnown RBP13.81□□□□□ -0.2
VPS33A-202ENST00000451053 TSPAN16Q9UKR8 245 aa13.81□□□□□ -0.2
VPS33A-202ENST00000451053 KIAA1257Q9ULG3 409 aa13.81□□□□□ -0.2
VPS33A-202ENST00000451053 LRRC53A6NM62 1247 aa13.8□□□□□ -0.2
VPS33A-202ENST00000451053 THAP12O43422 761 aa13.8□□□□□ -0.2
VPS33A-202ENST00000451053 FAM200BP0CF97 657 aa13.8□□□□□ -0.2
VPS33A-202ENST00000451053 KRT9P35527 623 aa13.8□□□□□ -0.2
VPS33A-202ENST00000451053 STAT1P42224 750 aa13.8□□□□□ -0.2
VPS33A-202ENST00000451053 ALDH1A3P47895 512 aa13.8□□□□□ -0.2
VPS33A-202ENST00000451053 RPL10AP62906 217 aaKnown RBP13.8□□□□□ -0.2
VPS33A-202ENST00000451053 PTK2Q05397 1052 aa13.8□□□□□ -0.2
VPS33A-202ENST00000451053 PLD1Q13393 1074 aa13.8□□□□□ -0.2
VPS33A-202ENST00000451053 HS1BP3Q53T59 392 aa13.8□□□□□ -0.2
VPS33A-202ENST00000451053 LCLAT1Q6UWP7 414 aa13.8□□□□□ -0.2
VPS33A-202ENST00000451053 CLEC20AQ6ZU45 233 aa13.8□□□□□ -0.2
VPS33A-202ENST00000451053 ZMIZ2Q8NF64 920 aa13.8□□□□□ -0.2
VPS33A-202ENST00000451053 OR8K1Q8NGG5 319 aa13.8□□□□□ -0.2
VPS33A-202ENST00000451053 ZNF606Q8WXB4 792 aa13.8□□□□□ -0.2
VPS33A-202ENST00000451053 SMG7Q92540 1137 aaKnown RBP13.8□□□□□ -0.2
VPS33A-202ENST00000451053 DMAP1Q9NPF5 467 aaPredicted RBP13.8□□□□□ -0.2
VPS33A-202ENST00000451053 HCFC1R1Q9NWW0 138 aa13.8□□□□□ -0.2
VPS33A-202ENST00000451053 CD207Q9UJ71 328 aa13.8□□□□□ -0.2
VPS33A-202ENST00000451053 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.8□□□□□ -0.2
VPS33A-202ENST00000451053 TRIM66O15016 1216 aa13.79□□□□□ -0.2
VPS33A-202ENST00000451053 XYLBO75191 536 aa13.79□□□□□ -0.2
VPS33A-202ENST00000451053 MICAL2O94851 1124 aa13.79□□□□□ -0.2
VPS33A-202ENST00000451053 CFHP08603 1231 aa13.79□□□□□ -0.2
VPS33A-202ENST00000451053 POU2F2P09086 479 aa13.79□□□□□ -0.2
VPS33A-202ENST00000451053 CCDC172P0C7W6 258 aa13.79□□□□□ -0.2
VPS33A-202ENST00000451053 ANXA13P27216 316 aa13.79□□□□□ -0.2
VPS33A-202ENST00000451053 EPHB3P54753 998 aa13.79□□□□□ -0.2
VPS33A-202ENST00000451053 MAP3K7CLP57077 242 aa13.79□□□□□ -0.2
VPS33A-202ENST00000451053 MTMR3Q13615 1198 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms