RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 ARHGEF37A1IGU5 675 aa15.02□□□□□ -0.01
USP39-207ENST00000450066 CXCL10P02778 98 aa15.02□□□□□ -0.01
USP39-207ENST00000450066 CLCN6P51797 869 aa15.02□□□□□ -0.01
USP39-207ENST00000450066 TAS2R40P59535 323 aa15.02□□□□□ -0.01
USP39-207ENST00000450066 TLE2Q04725 743 aa15.02□□□□□ -0.01
USP39-207ENST00000450066 TRIM60Q495X7 471 aa15.02□□□□□ -0.01
USP39-207ENST00000450066 DAB2IPQ5VWQ8 1189 aa15.02□□□□□ -0.01
USP39-207ENST00000450066 OR6B2Q6IFH4 312 aa15.02□□□□□ -0.01
USP39-207ENST00000450066 AADACL2Q6P093 401 aa15.02□□□□□ -0.01
USP39-207ENST00000450066 CC2D1AQ6P1N0 951 aaPredicted RBP15.02□□□□□ -0.01
USP39-207ENST00000450066 FAM183BPQ6ZVS7 135 aa15.02□□□□□ -0.01
USP39-207ENST00000450066 KATNAL2Q8IYT4 538 aa15.02□□□□□ -0.01
USP39-207ENST00000450066 FUKQ8N0W3 1084 aa15.02□□□□□ -0.01
USP39-207ENST00000450066 RSPH1Q8WYR4 309 aa15.02□□□□□ -0.01
USP39-207ENST00000450066 CDH9Q9ULB4 789 aa15.02□□□□□ -0.01
USP39-207ENST00000450066 TIMM13Q9Y5L4 95 aaPredicted RBP15.02□□□□□ -0.01
USP39-207ENST00000450066 GOLGA6L10A0A0M3HER8 536 aa15.01□□□□□ -0.01
USP39-207ENST00000450066 PSMA2P25787 234 aa15.01□□□□□ -0.01
USP39-207ENST00000450066 PCSK1P29120 753 aa15.01□□□□□ -0.01
USP39-207ENST00000450066 TKTP29401 623 aaKnown RBP15.01□□□□□ -0.01
USP39-207ENST00000450066 PLA2G4AP47712 749 aa15.01□□□□□ -0.01
USP39-207ENST00000450066 SLC8A3P57103 927 aa15.01□□□□□ -0.01
USP39-207ENST00000450066 VSNL1P62760 191 aa15.01□□□□□ -0.01
USP39-207ENST00000450066 PLCB3Q01970 1234 aa15.01□□□□□ -0.01
USP39-207ENST00000450066 ACAP1Q15027 740 aa15.01□□□□□ -0.01
USP39-207ENST00000450066 PKN2Q16513 984 aaKnown RBP15.01□□□□□ -0.01
USP39-207ENST00000450066 PPP2R5EQ16537 467 aa15.01□□□□□ -0.01
USP39-207ENST00000450066 PAN2Q504Q3 1202 aaKnown RBP15.01□□□□□ -0.01
USP39-207ENST00000450066 KIAA0319Q5VV43 1072 aa15.01□□□□□ -0.01
USP39-207ENST00000450066 OLFML1Q6UWY5 402 aa15.01□□□□□ -0.01
USP39-207ENST00000450066 METTL23Q86XA0 190 aa15.01□□□□□ -0.01
USP39-207ENST00000450066 ZNF280BQ86YH2 543 aa15.01□□□□□ -0.01
USP39-207ENST00000450066 SUSD3Q96L08 255 aa15.01□□□□□ -0.01
USP39-207ENST00000450066 HSFY1Q96LI6 401 aa15.01□□□□□ -0.01
USP39-207ENST00000450066 SYT15Q9BQS2 421 aa15.01□□□□□ -0.01
USP39-207ENST00000450066 DUSP16Q9BY84 665 aa15.01□□□□□ -0.01
USP39-207ENST00000450066 CRTAC1Q9NQ79 661 aa15.01□□□□□ -0.01
USP39-207ENST00000450066 TBC1D13Q9NVG8 400 aa15.01□□□□□ -0.01
USP39-207ENST00000450066 PCDHB7Q9Y5E2 793 aa15.01□□□□□ -0.01
USP39-207ENST00000450066 I3L4J1 428 aa15.01□□□□□ -0.01
USP39-207ENST00000450066 GABBR2O75899 941 aa15.01□□□□□ -0.01
USP39-207ENST00000450066 DDHD2O94830 711 aa15.01□□□□□ -0.01
USP39-207ENST00000450066 SSR1P43307 286 aaKnown RBP15.01□□□□□ -0.01
USP39-207ENST00000450066 ACADSBP45954 432 aa15.01□□□□□ -0.01
USP39-207ENST00000450066 BRCC3P46736 316 aa15.01□□□□□ -0.01
USP39-207ENST00000450066 SLC6A3Q01959 620 aa15.01□□□□□ -0.01
USP39-207ENST00000450066 RNASELQ05823 741 aaKnown RBP15.01□□□□□ -0.01
USP39-207ENST00000450066 MDH1BQ5I0G3 518 aa15.01□□□□□ -0.01
USP39-207ENST00000450066 PAQR9Q6ZVX9 377 aa15.01□□□□□ -0.01
USP39-207ENST00000450066 SLC13A5Q86YT5 568 aaPredicted RBP15.01□□□□□ -0.01
USP39-207ENST00000450066 KLHL7Q8IXQ5 586 aa15.01□□□□□ -0.01
USP39-207ENST00000450066 COLGALT2Q8IYK4 626 aa15.01□□□□□ -0.01
USP39-207ENST00000450066 EMC1Q8N766 993 aa15.01□□□□□ -0.01
USP39-207ENST00000450066 ANKLE1Q8NAG6 615 aa15.01□□□□□ -0.01
USP39-207ENST00000450066 HDAC7Q8WUI4 952 aa15.01□□□□□ -0.01
USP39-207ENST00000450066 HNRNPLLQ8WVV9 542 aaKnown RBP15.01□□□□□ -0.01
USP39-207ENST00000450066 SCLYQ96I15 445 aa15.01□□□□□ -0.01
USP39-207ENST00000450066 STIM2Q9P246 746 aa15.01□□□□□ -0.01
USP39-207ENST00000450066 TANC1Q9C0D5 1861 aa15□□□□□ -0.01
USP39-207ENST00000450066 TMEM189-UBE2V1I3L0A0 370 aa15□□□□□ -0.01
USP39-207ENST00000450066 PIK3R2O00459 728 aa15□□□□□ -0.01
USP39-207ENST00000450066 XPO1O14980 1071 aaKnown RBP15□□□□□ -0.01
USP39-207ENST00000450066 SART1O43290 800 aaKnown RBP15□□□□□ -0.01
USP39-207ENST00000450066 B4GALT3O60512 393 aa15□□□□□ -0.01
USP39-207ENST00000450066 HSPA8P11142 646 aaKnown RBP15□□□□□ -0.01
USP39-207ENST00000450066 GJA8P48165 433 aa15□□□□□ -0.01
USP39-207ENST00000450066 ZNF143P52747 638 aaPredicted RBP15□□□□□ -0.01
USP39-207ENST00000450066 MTERF4Q7Z6M4 381 aaKnown RBP15□□□□□ -0.01
USP39-207ENST00000450066 SCUBE3Q8IX30 993 aa15□□□□□ -0.01
USP39-207ENST00000450066 ABI1Q8IZP0 508 aa15□□□□□ -0.01
USP39-207ENST00000450066 CRIPAKQ8N1N5 446 aa15□□□□□ -0.01
USP39-207ENST00000450066 EXD1Q8NHP7 514 aa15□□□□□ -0.01
USP39-207ENST00000450066 MYCBPAPQ8TBZ2 947 aa15□□□□□ -0.01
USP39-207ENST00000450066 DIS3LQ8TF46 1054 aaKnown RBP15□□□□□ -0.01
USP39-207ENST00000450066 HASPINQ8TF76 798 aa15□□□□□ -0.01
USP39-207ENST00000450066 ACBD6Q9BR61 282 aa15□□□□□ -0.01
USP39-207ENST00000450066 SLITRK6Q9H5Y7 841 aa15□□□□□ -0.01
USP39-207ENST00000450066 DMGDHQ9UI17 866 aaKnown RBP15□□□□□ -0.01
USP39-207ENST00000450066 NR2E1Q9Y466 385 aa15□□□□□ -0.01
USP39-207ENST00000450066 C2CD4BA6NLJ0 364 aa14.99□□□□□ -0.01
USP39-207ENST00000450066 PAPSS1O43252 624 aaPredicted RBP14.99□□□□□ -0.01
USP39-207ENST00000450066 ERLIN1O75477 346 aa14.99□□□□□ -0.01
USP39-207ENST00000450066 ZRANB2O95218 330 aaKnown RBP eCLIP14.99□□□□□ -0.01
USP39-207ENST00000450066 ITGB1P05556 798 aa14.99□□□□□ -0.01
USP39-207ENST00000450066 NPR3P17342 541 aa14.99□□□□□ -0.01
USP39-207ENST00000450066 TYMPP19971 482 aa14.99□□□□□ -0.01
USP39-207ENST00000450066 SCNN1AP37088 669 aa14.99□□□□□ -0.01
USP39-207ENST00000450066 CCL23P55773 120 aa14.99□□□□□ -0.01
USP39-207ENST00000450066 TCTN1Q2MV58 587 aa14.99□□□□□ -0.01
USP39-207ENST00000450066 TMCO3Q6UWJ1 677 aa14.99□□□□□ -0.01
USP39-207ENST00000450066 POLNQ7Z5Q5 900 aa14.99□□□□□ -0.01
USP39-207ENST00000450066 PIWIL1Q96J94 861 aaKnown RBP14.99□□□□□ -0.01
USP39-207ENST00000450066 FAM193BQ96PV7 902 aaPredicted RBP14.99□□□□□ -0.01
USP39-207ENST00000450066 RTP3Q9BQQ7 232 aa14.99□□□□□ -0.01
USP39-207ENST00000450066 B3GNT5Q9BYG0 378 aa14.99□□□□□ -0.01
USP39-207ENST00000450066 DDX47Q9H0S4 455 aaKnown RBP14.99□□□□□ -0.01
USP39-207ENST00000450066 MTUS1Q9ULD2 1270 aa14.99□□□□□ -0.01
USP39-207ENST00000450066 LRFN2Q9ULH4 789 aa14.99□□□□□ -0.01
USP39-207ENST00000450066 MYBPHLA2RUH7 354 aa14.99□□□□□ -0.01
USP39-207ENST00000450066 CLDN5O00501 218 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms