RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 FRMD4BQ9Y2L6 1034 aa23.44■■□□□ 1.34
CPSF7-208ENST00000450000 CALUO43852 315 aaPredicted RBP23.43■■□□□ 1.34
CPSF7-208ENST00000450000 MYL6P60660 151 aa23.43■■□□□ 1.34
CPSF7-208ENST00000450000 RUNX3Q13761 415 aa23.43■■□□□ 1.34
CPSF7-208ENST00000450000 CCDC142Q17RM4 750 aa23.43■■□□□ 1.34
CPSF7-208ENST00000450000 ZNF699Q32M78 642 aa23.43■■□□□ 1.34
CPSF7-208ENST00000450000 DENND5BQ6ZUT9 1274 aa23.43■■□□□ 1.34
CPSF7-208ENST00000450000 PCED1BQ96HM7 432 aa23.43■■□□□ 1.34
CPSF7-208ENST00000450000 CEP295NLQ96MC4 621 aa23.43■■□□□ 1.34
CPSF7-208ENST00000450000 CRTAC1Q9NQ79 661 aa23.43■■□□□ 1.34
CPSF7-208ENST00000450000 TRPM5Q9NZQ8 1165 aa23.43■■□□□ 1.34
CPSF7-208ENST00000450000 CCL26Q9Y258 94 aa23.43■■□□□ 1.34
CPSF7-208ENST00000450000 PTPRZ1P23471 2315 aaPredicted RBP23.42■■□□□ 1.34
CPSF7-208ENST00000450000 KLRC4O43908 158 aa23.42■■□□□ 1.34
CPSF7-208ENST00000450000 RPN1P04843 607 aaKnown RBP23.42■■□□□ 1.34
CPSF7-208ENST00000450000 P4HA1P13674 534 aa23.42■■□□□ 1.34
CPSF7-208ENST00000450000 FAM160A1Q05DH4 1040 aa23.42■■□□□ 1.34
CPSF7-208ENST00000450000 ZNF268Q14587 947 aaPredicted RBP23.42■■□□□ 1.34
CPSF7-208ENST00000450000 PDGFRLQ15198 375 aa23.42■■□□□ 1.34
CPSF7-208ENST00000450000 ZNF667Q5HYK9 610 aa23.42■■□□□ 1.34
CPSF7-208ENST00000450000 CEP135Q66GS9 1140 aa23.42■■□□□ 1.34
CPSF7-208ENST00000450000 MAMSTRQ6ZN01 415 aa23.42■■□□□ 1.34
CPSF7-208ENST00000450000 LIMS2Q7Z4I7 341 aa23.42■■□□□ 1.34
CPSF7-208ENST00000450000 ZNF687Q8N1G0 1237 aa23.42■■□□□ 1.34
CPSF7-208ENST00000450000 SPEM1Q8N4L4 309 aa23.42■■□□□ 1.34
CPSF7-208ENST00000450000 SPATA17Q96L03 361 aa23.42■■□□□ 1.34
CPSF7-208ENST00000450000 EBF3Q9H4W6 596 aa23.42■■□□□ 1.34
CPSF7-208ENST00000450000 RBM12Q9NTZ6 932 aaKnown RBP23.42■■□□□ 1.34
CPSF7-208ENST00000450000 ATP8B3O60423 1300 aa23.41■■□□□ 1.34
CPSF7-208ENST00000450000 PDXKO00764 312 aa23.41■■□□□ 1.34
CPSF7-208ENST00000450000 STAU1O95793 577 aaKnown RBP23.41■■□□□ 1.34
CPSF7-208ENST00000450000 ABL1P00519 1130 aa23.41■■□□□ 1.34
CPSF7-208ENST00000450000 PTPN1P18031 435 aaKnown RBP23.41■■□□□ 1.34
CPSF7-208ENST00000450000 TRIM21P19474 475 aaKnown RBP23.41■■□□□ 1.34
CPSF7-208ENST00000450000 IFNAR2P48551 515 aa23.41■■□□□ 1.34
CPSF7-208ENST00000450000 CASP4P49662 377 aa23.41■■□□□ 1.34
CPSF7-208ENST00000450000 GRSF1Q12849 480 aaKnown RBP eCLIP23.41■■□□□ 1.34
CPSF7-208ENST00000450000 SYNPOQ8N3V7 929 aa23.41■■□□□ 1.34
CPSF7-208ENST00000450000 ZBTB44Q8NCP5 570 aa23.41■■□□□ 1.34
CPSF7-208ENST00000450000 KIAA0895Q8NCT3 520 aa23.41■■□□□ 1.34
CPSF7-208ENST00000450000 ZNF516Q92618 1163 aa23.41■■□□□ 1.34
CPSF7-208ENST00000450000 ELOVL4Q9GZR5 314 aa23.41■■□□□ 1.34
CPSF7-208ENST00000450000 NR3C1P04150 777 aa23.4■■□□□ 1.34
CPSF7-208ENST00000450000 HDCP19113 662 aa23.4■■□□□ 1.34
CPSF7-208ENST00000450000 NCOA4Q13772 614 aa23.4■■□□□ 1.34
CPSF7-208ENST00000450000 MTF1Q14872 753 aa23.4■■□□□ 1.34
CPSF7-208ENST00000450000 TDRD10Q5VZ19 366 aaKnown RBP23.4■■□□□ 1.34
CPSF7-208ENST00000450000 TRIM68Q6AZZ1 485 aa23.4■■□□□ 1.34
CPSF7-208ENST00000450000 TXNDC11Q6PKC3 985 aa23.4■■□□□ 1.34
CPSF7-208ENST00000450000 SLC9A9Q8IVB4 645 aa23.4■■□□□ 1.34
CPSF7-208ENST00000450000 KIAA2013Q8IYS2 634 aa23.4■■□□□ 1.34
CPSF7-208ENST00000450000 CPA6Q8N4T0 437 aa23.4■■□□□ 1.34
CPSF7-208ENST00000450000 PARD3BQ8TEW8 1205 aa23.4■■□□□ 1.34
CPSF7-208ENST00000450000 FAM83CQ9BQN1 747 aa23.4■■□□□ 1.34
CPSF7-208ENST00000450000 MED10Q9BTT4 135 aa23.4■■□□□ 1.34
CPSF7-208ENST00000450000 DUS2Q9NX74 493 aaKnown RBP23.4■■□□□ 1.34
CPSF7-208ENST00000450000 LRRIQ3A6PVS8 624 aaPredicted RBP23.39■■□□□ 1.33
CPSF7-208ENST00000450000 ID4P47928 161 aa23.39■■□□□ 1.33
CPSF7-208ENST00000450000 PPP3CCP48454 512 aa23.39■■□□□ 1.33
CPSF7-208ENST00000450000 NDUFA8P51970 172 aa23.39■■□□□ 1.33
CPSF7-208ENST00000450000 SATB1Q01826 763 aa23.39■■□□□ 1.33
CPSF7-208ENST00000450000 NR1H3Q13133 447 aa23.39■■□□□ 1.33
CPSF7-208ENST00000450000 BECN1Q14457 450 aa23.39■■□□□ 1.33
CPSF7-208ENST00000450000 ARL14EPQ8N8R7 260 aaPredicted RBP23.39■■□□□ 1.33
CPSF7-208ENST00000450000 B3GALNT2Q8NCR0 500 aa23.39■■□□□ 1.33
CPSF7-208ENST00000450000 TNIP3Q96KP6 325 aa23.39■■□□□ 1.33
CPSF7-208ENST00000450000 CYP2S1Q96SQ9 504 aa23.39■■□□□ 1.33
CPSF7-208ENST00000450000 GMEB2Q9UKD1 530 aa23.39■■□□□ 1.33
CPSF7-208ENST00000450000 SMG5Q9UPR3 1016 aaKnown RBP23.39■■□□□ 1.33
CPSF7-208ENST00000450000 HPSEQ9Y251 543 aa23.39■■□□□ 1.33
CPSF7-208ENST00000450000 TICRRQ7Z2Z1 1910 aa23.39■■□□□ 1.33
CPSF7-208ENST00000450000 GOLGA6L4A6NEF3 574 aa23.38■■□□□ 1.33
CPSF7-208ENST00000450000 F8VP50 259 aa23.38■■□□□ 1.33
CPSF7-208ENST00000450000 IFRD2Q12894 506 aaPredicted RBP23.38■■□□□ 1.33
CPSF7-208ENST00000450000 SGSM1Q2NKQ1 1148 aa23.38■■□□□ 1.33
CPSF7-208ENST00000450000 SCARA5Q6ZMJ2 495 aa23.38■■□□□ 1.33
CPSF7-208ENST00000450000 SUMF1Q8NBK3 374 aa23.38■■□□□ 1.33
CPSF7-208ENST00000450000 C8orf48Q96LL4 319 aa23.38■■□□□ 1.33
CPSF7-208ENST00000450000 SLITRK1Q96PX8 696 aa23.38■■□□□ 1.33
CPSF7-208ENST00000450000 ZDHHC9Q9Y397 364 aa23.38■■□□□ 1.33
CPSF7-208ENST00000450000 TADA3O75528 432 aa23.37■■□□□ 1.33
CPSF7-208ENST00000450000 KRT13P13646 458 aa23.37■■□□□ 1.33
CPSF7-208ENST00000450000 RPL13P26373 211 aaKnown RBP23.37■■□□□ 1.33
CPSF7-208ENST00000450000 PRR23BQ6ZRT6 265 aa23.37■■□□□ 1.33
CPSF7-208ENST00000450000 SH3RF2Q8TEC5 729 aa23.37■■□□□ 1.33
CPSF7-208ENST00000450000 ATP2A3Q93084 1043 aa23.37■■□□□ 1.33
CPSF7-208ENST00000450000 CHAMP1Q96JM3 812 aa23.37■■□□□ 1.33
CPSF7-208ENST00000450000 IMPG2Q9BZV3 1241 aa23.37■■□□□ 1.33
CPSF7-208ENST00000450000 XYLT2Q9H1B5 865 aa23.37■■□□□ 1.33
CPSF7-208ENST00000450000 EPC1Q9H2F5 836 aa23.37■■□□□ 1.33
CPSF7-208ENST00000450000 KCTD10Q9H3F6 313 aa23.37■■□□□ 1.33
CPSF7-208ENST00000450000 DPEP3Q9H4B8 488 aa23.37■■□□□ 1.33
CPSF7-208ENST00000450000 HPS4Q9NQG7 708 aa23.37■■□□□ 1.33
CPSF7-208ENST00000450000 DMAC2Q9NW81 257 aa23.37■■□□□ 1.33
CPSF7-208ENST00000450000 CACNA1IQ9P0X4 2223 aa23.37■■□□□ 1.33
CPSF7-208ENST00000450000 A0A1W2PQ27 194 aa23.36■■□□□ 1.33
CPSF7-208ENST00000450000 A0A1W2PQ64 194 aa23.36■■□□□ 1.33
CPSF7-208ENST00000450000 A0A1W2PQD8 194 aa23.36■■□□□ 1.33
CPSF7-208ENST00000450000 C2orf78A6NCI8 922 aa23.36■■□□□ 1.33
CPSF7-208ENST00000450000 LILRB5O75023 590 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms