RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 C4orf33Q8N1A6 199 aa20.07■□□□□ 0.8
HMGA1-205ENST00000447654 THTPAQ9BU02 230 aa20.07■□□□□ 0.8
HMGA1-205ENST00000447654 UBAP1Q9NZ09 502 aa20.07■□□□□ 0.8
HMGA1-205ENST00000447654 RSL24D1Q9UHA3 163 aaKnown RBP20.07■□□□□ 0.8
HMGA1-205ENST00000447654 SORCS3Q9UPU3 1222 aa20.07■□□□□ 0.8
HMGA1-205ENST00000447654 GOLGA8TH3BQL2 631 aa20.07■□□□□ 0.8
HMGA1-205ENST00000447654 TMED10P49755 219 aaKnown RBP20.07■□□□□ 0.8
HMGA1-205ENST00000447654 VCPP55072 806 aaKnown RBP20.07■□□□□ 0.8
HMGA1-205ENST00000447654 SLFN13Q68D06 897 aa20.07■□□□□ 0.8
HMGA1-205ENST00000447654 FBXL19Q6PCT2 694 aa20.07■□□□□ 0.8
HMGA1-205ENST00000447654 NAP1L4Q99733 375 aaKnown RBP20.07■□□□□ 0.8
HMGA1-205ENST00000447654 PSTPIP2Q9H939 334 aa20.07■□□□□ 0.8
HMGA1-205ENST00000447654 TBC1D23Q9NUY8 699 aa20.07■□□□□ 0.8
HMGA1-205ENST00000447654 ATF5Q9Y2D1 282 aaPredicted RBP20.07■□□□□ 0.8
HMGA1-205ENST00000447654 COL4A5P29400 1685 aa20.06■□□□□ 0.8
HMGA1-205ENST00000447654 SMCHD1A6NHR9 2005 aa20.06■□□□□ 0.8
HMGA1-205ENST00000447654 KLF11O14901 512 aa20.06■□□□□ 0.8
HMGA1-205ENST00000447654 GSTT2P0CG29 244 aa20.06■□□□□ 0.8
HMGA1-205ENST00000447654 GSTT2BP0CG30 244 aa20.06■□□□□ 0.8
HMGA1-205ENST00000447654 STIP1P31948 543 aaKnown RBP20.06■□□□□ 0.8
HMGA1-205ENST00000447654 NCKAP1LP55160 1127 aa20.06■□□□□ 0.8
HMGA1-205ENST00000447654 NAA20P61599 178 aa20.06■□□□□ 0.8
HMGA1-205ENST00000447654 HIC1Q14526 733 aa20.06■□□□□ 0.8
HMGA1-205ENST00000447654 DRAP1Q14919 205 aaPredicted RBP20.06■□□□□ 0.8
HMGA1-205ENST00000447654 HERC4Q5GLZ8 1057 aaPredicted RBP20.06■□□□□ 0.8
HMGA1-205ENST00000447654 OGFRL1Q5TC84 451 aaPredicted RBP20.06■□□□□ 0.8
HMGA1-205ENST00000447654 POTEHQ6S545 545 aa20.06■□□□□ 0.8
HMGA1-205ENST00000447654 RSPH3Q86UC2 560 aa20.06■□□□□ 0.8
HMGA1-205ENST00000447654 C9orf72Q96LT7 481 aa20.06■□□□□ 0.8
HMGA1-205ENST00000447654 HAUS8Q9BT25 410 aa20.06■□□□□ 0.8
HMGA1-205ENST00000447654 MRPL1Q9BYD6 325 aaKnown RBP20.06■□□□□ 0.8
HMGA1-205ENST00000447654 NYAP2Q9P242 653 aa20.06■□□□□ 0.8
HMGA1-205ENST00000447654 GPC6Q9Y625 555 aaPredicted RBP20.06■□□□□ 0.8
HMGA1-205ENST00000447654 H3BNX3 289 aa20.05■□□□□ 0.8
HMGA1-205ENST00000447654 PHKA2P46019 1235 aa20.05■□□□□ 0.8
HMGA1-205ENST00000447654 ARL4CP56559 192 aa20.05■□□□□ 0.8
HMGA1-205ENST00000447654 PRKD1Q15139 912 aaPredicted RBP20.05■□□□□ 0.8
HMGA1-205ENST00000447654 KNOP1Q1ED39 458 aaKnown RBP20.05■□□□□ 0.8
HMGA1-205ENST00000447654 DEPDC1Q5TB30 811 aa20.05■□□□□ 0.8
HMGA1-205ENST00000447654 PPP1R18Q6NYC8 613 aa20.05■□□□□ 0.8
HMGA1-205ENST00000447654 SLC2A7Q6PXP3 512 aa20.05■□□□□ 0.8
HMGA1-205ENST00000447654 RFX8Q6ZV50 586 aa20.05■□□□□ 0.8
HMGA1-205ENST00000447654 NLRX1Q86UT6 975 aa20.05■□□□□ 0.8
HMGA1-205ENST00000447654 SAMD3Q8N6K7 520 aa20.05■□□□□ 0.8
HMGA1-205ENST00000447654 ZMAT2Q96NC0 199 aaKnown RBP20.05■□□□□ 0.8
HMGA1-205ENST00000447654 RBM15Q96T37 977 aaKnown RBP eCLIP20.05■□□□□ 0.8
HMGA1-205ENST00000447654 GRIP2Q9C0E4 1043 aa20.05■□□□□ 0.8
HMGA1-205ENST00000447654 SQORQ9Y6N5 450 aa20.05■□□□□ 0.8
HMGA1-205ENST00000447654 F5H6K3 240 aa20.05■□□□□ 0.8
HMGA1-205ENST00000447654 TXNDC9O14530 226 aa20.05■□□□□ 0.8
HMGA1-205ENST00000447654 KRT38O76015 456 aa20.05■□□□□ 0.8
HMGA1-205ENST00000447654 BAIAP3O94812 1187 aa20.05■□□□□ 0.8
HMGA1-205ENST00000447654 OVGP1Q12889 678 aa20.05■□□□□ 0.8
HMGA1-205ENST00000447654 CATSPER1Q8NEC5 780 aa20.05■□□□□ 0.8
HMGA1-205ENST00000447654 NLRP4Q96MN2 994 aa20.05■□□□□ 0.8
HMGA1-205ENST00000447654 AGPAT1Q99943 283 aa20.05■□□□□ 0.8
HMGA1-205ENST00000447654 FGFBP2Q9BYJ0 223 aa20.05■□□□□ 0.8
HMGA1-205ENST00000447654 NMUR2Q9GZQ4 415 aa20.05■□□□□ 0.8
HMGA1-205ENST00000447654 RRN3Q9NYV6 651 aa20.05■□□□□ 0.8
HMGA1-205ENST00000447654 DNAJC12Q9UKB3 198 aa20.05■□□□□ 0.8
HMGA1-205ENST00000447654 ADAMTS6Q9UKP5 1117 aa20.05■□□□□ 0.8
HMGA1-205ENST00000447654 COQ6Q9Y2Z9 468 aa20.05■□□□□ 0.8
HMGA1-205ENST00000447654 ARFGEF1Q9Y6D6 1849 aa20.04■□□□□ 0.8
HMGA1-205ENST00000447654 FUOMA2VDF0 154 aa20.04■□□□□ 0.8
HMGA1-205ENST00000447654 SOBPA7XYQ1 873 aa20.04■□□□□ 0.8
HMGA1-205ENST00000447654 EML1O00423 815 aa20.04■□□□□ 0.8
HMGA1-205ENST00000447654 GH2P01242 217 aa20.04■□□□□ 0.8
HMGA1-205ENST00000447654 ADRA1DP25100 572 aa20.04■□□□□ 0.8
HMGA1-205ENST00000447654 HSPA13P48723 471 aa20.04■□□□□ 0.8
HMGA1-205ENST00000447654 TLR1Q15399 786 aa20.04■□□□□ 0.8
HMGA1-205ENST00000447654 CCDC142Q17RM4 750 aa20.04■□□□□ 0.8
HMGA1-205ENST00000447654 DCAF17Q5H9S7 520 aaPredicted RBP20.04■□□□□ 0.8
HMGA1-205ENST00000447654 PRR11Q96HE9 360 aaPredicted RBP20.04■□□□□ 0.8
HMGA1-205ENST00000447654 DNAJC17Q9NVM6 304 aaKnown RBP20.04■□□□□ 0.8
HMGA1-205ENST00000447654 SOX13Q9UN79 622 aa20.04■□□□□ 0.8
HMGA1-205ENST00000447654 PCDHA1Q9Y5I3 950 aa20.04■□□□□ 0.8
HMGA1-205ENST00000447654 HEY1Q9Y5J3 304 aa20.04■□□□□ 0.8
HMGA1-205ENST00000447654 NFASCO94856 1347 aa20.04■□□□□ 0.8
HMGA1-205ENST00000447654 LSM1O15116 133 aaKnown RBP20.04■□□□□ 0.8
HMGA1-205ENST00000447654 SPOPO43791 374 aa20.04■□□□□ 0.8
HMGA1-205ENST00000447654 DLATP10515 647 aaKnown RBP20.04■□□□□ 0.8
HMGA1-205ENST00000447654 PEX2P28328 305 aa20.04■□□□□ 0.8
HMGA1-205ENST00000447654 PMLP29590 882 aa20.04■□□□□ 0.8
HMGA1-205ENST00000447654 SLC1A1P43005 524 aa20.04■□□□□ 0.8
HMGA1-205ENST00000447654 BCAP31P51572 246 aa20.04■□□□□ 0.8
HMGA1-205ENST00000447654 TGFBIQ15582 683 aa20.04■□□□□ 0.8
HMGA1-205ENST00000447654 ABCB5Q2M3G0 1257 aa20.04■□□□□ 0.8
HMGA1-205ENST00000447654 ZNF362Q5T0B9 420 aaPredicted RBP20.04■□□□□ 0.8
HMGA1-205ENST00000447654 LPCAT4Q643R3 524 aa20.04■□□□□ 0.8
HMGA1-205ENST00000447654 DEFB132Q7Z7B7 95 aa20.04■□□□□ 0.8
HMGA1-205ENST00000447654 CDAN1Q8IWY9 1227 aa20.04■□□□□ 0.8
HMGA1-205ENST00000447654 C1orf54Q8WWF1 131 aa20.04■□□□□ 0.8
HMGA1-205ENST00000447654 PSPC1Q8WXF1 523 aaKnown RBP20.04■□□□□ 0.8
HMGA1-205ENST00000447654 DCLK3Q9C098 648 aa20.04■□□□□ 0.8
HMGA1-205ENST00000447654 KLC2Q9H0B6 622 aa20.04■□□□□ 0.8
HMGA1-205ENST00000447654 TAS2R14Q9NYV8 317 aa20.04■□□□□ 0.8
HMGA1-205ENST00000447654 TBC1D7Q9P0N9 293 aa20.04■□□□□ 0.8
HMGA1-205ENST00000447654 DTNAQ9Y4J8 743 aa20.04■□□□□ 0.8
HMGA1-205ENST00000447654 MAD1L1Q9Y6D9 718 aa20.04■□□□□ 0.8
HMGA1-205ENST00000447654 A0A088AWK7 358 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms