RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 ADGRF2Q8IZF7 708 aa26.13■■□□□ 1.77
PMS1-214ENST00000446877 SYCP3Q8IZU3 236 aa26.13■■□□□ 1.77
PMS1-214ENST00000446877 TOP6BLQ8N6T0 577 aa26.13■■□□□ 1.77
PMS1-214ENST00000446877 PKMYT1Q99640 499 aa26.13■■□□□ 1.77
PMS1-214ENST00000446877 LINC00597Q9H2U6 94 aa26.13■■□□□ 1.77
PMS1-214ENST00000446877 CCDC39Q9UFE4 941 aa26.13■■□□□ 1.77
PMS1-214ENST00000446877 PPP1R37O75864 691 aa26.12■■□□□ 1.77
PMS1-214ENST00000446877 GAP43P17677 238 aa26.12■■□□□ 1.77
PMS1-214ENST00000446877 SF3A1Q15459 793 aaKnown RBP26.12■■□□□ 1.77
PMS1-214ENST00000446877 C2orf27AQ580R0 203 aa26.12■■□□□ 1.77
PMS1-214ENST00000446877 L1TD1Q5T7N2 865 aaKnown RBP26.12■■□□□ 1.77
PMS1-214ENST00000446877 C4orf50Q6ZRC1 276 aa26.12■■□□□ 1.77
PMS1-214ENST00000446877 NOC3LQ8WTT2 800 aaKnown RBP26.12■■□□□ 1.77
PMS1-214ENST00000446877 TBC1D7Q9P0N9 293 aa26.12■■□□□ 1.77
PMS1-214ENST00000446877 GCNT4Q9P109 453 aa26.12■■□□□ 1.77
PMS1-214ENST00000446877 ARHGAP26Q9UNA1 814 aa26.12■■□□□ 1.77
PMS1-214ENST00000446877 PCDHB13Q9Y5F0 798 aa26.12■■□□□ 1.77
PMS1-214ENST00000446877 ATG2BQ96BY7 2078 aa26.11■■□□□ 1.77
PMS1-214ENST00000446877 LNP1A1A4G5 178 aa26.11■■□□□ 1.77
PMS1-214ENST00000446877 C2orf78A6NCI8 922 aa26.11■■□□□ 1.77
PMS1-214ENST00000446877 GCNT3O95395 438 aa26.11■■□□□ 1.77
PMS1-214ENST00000446877 SEC13P55735 322 aa26.11■■□□□ 1.77
PMS1-214ENST00000446877 WNT7BP56706 349 aa26.11■■□□□ 1.77
PMS1-214ENST00000446877 KCNA1Q09470 495 aa26.11■■□□□ 1.77
PMS1-214ENST00000446877 PMS2CLQ68D20 193 aa26.11■■□□□ 1.77
PMS1-214ENST00000446877 ANO7Q6IWH7 933 aa26.11■■□□□ 1.77
PMS1-214ENST00000446877 BRAPQ7Z569 592 aa26.11■■□□□ 1.77
PMS1-214ENST00000446877 OSTM1Q86WC4 334 aa26.11■■□□□ 1.77
PMS1-214ENST00000446877 USP33Q8TEY7 942 aa26.11■■□□□ 1.77
PMS1-214ENST00000446877 STRA6Q9BX79 667 aa26.11■■□□□ 1.77
PMS1-214ENST00000446877 TPSD1Q9BZJ3 242 aa26.11■■□□□ 1.77
PMS1-214ENST00000446877 TMEM9BQ9NQ34 198 aa26.11■■□□□ 1.77
PMS1-214ENST00000446877 MAGEC2Q9UBF1 373 aaPredicted RBP26.11■■□□□ 1.77
PMS1-214ENST00000446877 STK17AQ9UEE5 414 aa26.11■■□□□ 1.77
PMS1-214ENST00000446877 GABRDO14764 452 aa26.1■■□□□ 1.77
PMS1-214ENST00000446877 TMEM191BP0C7N4 346 aa26.1■■□□□ 1.77
PMS1-214ENST00000446877 TCF3P15923 654 aa26.1■■□□□ 1.77
PMS1-214ENST00000446877 GARTP22102 1010 aa26.1■■□□□ 1.77
PMS1-214ENST00000446877 MAGEA11P43364 429 aa26.1■■□□□ 1.77
PMS1-214ENST00000446877 ZNF252P-AS1Q0IIN9 211 aa26.1■■□□□ 1.77
PMS1-214ENST00000446877 MYO1EQ12965 1108 aa26.1■■□□□ 1.77
PMS1-214ENST00000446877 SH3PXD2AQ5TCZ1 1133 aa26.1■■□□□ 1.77
PMS1-214ENST00000446877 SV2BQ7L1I2 683 aa26.1■■□□□ 1.77
PMS1-214ENST00000446877 CYP2U1Q7Z449 544 aa26.1■■□□□ 1.77
PMS1-214ENST00000446877 TTC30AQ86WT1 665 aa26.1■■□□□ 1.77
PMS1-214ENST00000446877 EPSTI1Q96J88 318 aa26.1■■□□□ 1.77
PMS1-214ENST00000446877 TRPM5Q9NZQ8 1165 aa26.1■■□□□ 1.77
PMS1-214ENST00000446877 GOLGA8IPA6NC78 632 aa26.09■■□□□ 1.77
PMS1-214ENST00000446877 GOLGA8JA6NMD2 632 aa26.09■■□□□ 1.77
PMS1-214ENST00000446877 GIPC1O14908 333 aa26.09■■□□□ 1.77
PMS1-214ENST00000446877 ALDH1A2O94788 518 aa26.09■■□□□ 1.77
PMS1-214ENST00000446877 FOXC1Q12948 553 aa26.09■■□□□ 1.77
PMS1-214ENST00000446877 CCDC142Q17RM4 750 aa26.09■■□□□ 1.77
PMS1-214ENST00000446877 FAM171BQ6P995 826 aa26.09■■□□□ 1.77
PMS1-214ENST00000446877 VSTM1Q6UX27 236 aa26.09■■□□□ 1.77
PMS1-214ENST00000446877 UNQ6494/PRO21346Q6UXR6 183 aa26.09■■□□□ 1.77
PMS1-214ENST00000446877 ZSWIM2Q8NEG5 633 aa26.09■■□□□ 1.77
PMS1-214ENST00000446877 CNOT6LQ96LI5 555 aaKnown RBP26.09■■□□□ 1.77
PMS1-214ENST00000446877 EHD2Q9NZN4 543 aa26.09■■□□□ 1.77
PMS1-214ENST00000446877 ANK1P16157 1881 aa26.08■■□□□ 1.77
PMS1-214ENST00000446877 MYMKA6NI61 221 aa26.08■■□□□ 1.77
PMS1-214ENST00000446877 K7EQS6 105 aa26.08■■□□□ 1.77
PMS1-214ENST00000446877 PFKLP17858 780 aa26.08■■□□□ 1.77
PMS1-214ENST00000446877 GRIK1P39086 918 aa26.08■■□□□ 1.77
PMS1-214ENST00000446877 DHPSP49366 369 aaPredicted RBP26.08■■□□□ 1.77
PMS1-214ENST00000446877 MAPRE1Q15691 268 aaKnown RBP26.08■■□□□ 1.77
PMS1-214ENST00000446877 SOWAHAQ2M3V2 549 aa26.08■■□□□ 1.77
PMS1-214ENST00000446877 RRAGBQ5VZM2 374 aa26.08■■□□□ 1.77
PMS1-214ENST00000446877 DPH6Q7L8W6 267 aa26.08■■□□□ 1.77
PMS1-214ENST00000446877 RASSF3Q86WH2 238 aa26.08■■□□□ 1.77
PMS1-214ENST00000446877 CCDC33Q8N5R6 958 aa26.08■■□□□ 1.77
PMS1-214ENST00000446877 CXorf38Q8TB03 319 aa26.08■■□□□ 1.77
PMS1-214ENST00000446877 ANKRD36BP1Q96IX9 119 aa26.08■■□□□ 1.77
PMS1-214ENST00000446877 SPATA17Q96L03 361 aa26.08■■□□□ 1.77
PMS1-214ENST00000446877 CEP295NLQ96MC4 621 aa26.08■■□□□ 1.77
PMS1-214ENST00000446877 SYT15Q9BQS2 421 aa26.08■■□□□ 1.77
PMS1-214ENST00000446877 MTMR12Q9C0I1 747 aa26.08■■□□□ 1.77
PMS1-214ENST00000446877 PDE11AQ9HCR9 933 aa26.08■■□□□ 1.77
PMS1-214ENST00000446877 MMP17Q9ULZ9 603 aa26.08■■□□□ 1.77
PMS1-214ENST00000446877 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.08■■□□□ 1.77
PMS1-214ENST00000446877 C1QTNF9BB2RNN3 333 aa26.07■■□□□ 1.76
PMS1-214ENST00000446877 HCRTO43612 131 aa26.07■■□□□ 1.76
PMS1-214ENST00000446877 C1QTNF9P0C862 333 aa26.07■■□□□ 1.76
PMS1-214ENST00000446877 CEACAM1P13688 526 aa26.07■■□□□ 1.76
PMS1-214ENST00000446877 ANXA13P27216 316 aa26.07■■□□□ 1.76
PMS1-214ENST00000446877 TXLNAP40222 546 aa26.07■■□□□ 1.76
PMS1-214ENST00000446877 OPRD1P41143 372 aa26.07■■□□□ 1.76
PMS1-214ENST00000446877 ALCAMQ13740 583 aa26.07■■□□□ 1.76
PMS1-214ENST00000446877 SCARA3Q6AZY7 606 aa26.07■■□□□ 1.76
PMS1-214ENST00000446877 DENND5BQ6ZUT9 1274 aa26.07■■□□□ 1.76
PMS1-214ENST00000446877 USP49Q70CQ1 688 aa26.07■■□□□ 1.76
PMS1-214ENST00000446877 CDH9Q9ULB4 789 aa26.07■■□□□ 1.76
PMS1-214ENST00000446877 CIZ1Q9ULV3 898 aaPredicted RBP26.07■■□□□ 1.76
PMS1-214ENST00000446877 LEFTY2O00292 366 aa26.06■■□□□ 1.76
PMS1-214ENST00000446877 MAP3K13O43283 966 aa26.06■■□□□ 1.76
PMS1-214ENST00000446877 ATP2C2O75185 946 aa26.06■■□□□ 1.76
PMS1-214ENST00000446877 IDEP14735 1019 aa26.06■■□□□ 1.76
PMS1-214ENST00000446877 CSRP1P21291 193 aaKnown RBP26.06■■□□□ 1.76
PMS1-214ENST00000446877 BDNFP23560 247 aa26.06■■□□□ 1.76
PMS1-214ENST00000446877 PSMC1P62191 440 aaKnown RBP26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms