RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 NCOA4Q13772 614 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 C6orf52Q5T4I8 152 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 CDH24Q86UP0 819 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 CLEC4FQ8N1N0 589 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 FBXW8Q8N3Y1 598 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 SLC44A5Q8NCS7 719 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 ANKRD36BP1Q96IX9 119 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 KLRC4O43908 158 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 CDH6P55285 790 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 STX5Q13190 355 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 DGUOKQ16854 277 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 ARHGEF16Q5VV41 709 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 IFNEQ86WN2 208 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 PAK5Q9P286 719 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 UGT1A9O60656 530 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 MAGEC1O60732 1142 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 ITGA2BP08514 1039 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 UGT1A6P19224 532 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 UGT1A1P22309 533 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 UGT1A4P22310 534 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 TBXAS1P24557 533 aaPredicted RBP8.18□□□□□ -1.1
SMG1-202ENST00000446231 UGT1A3P35503 534 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 UGT1A5P35504 534 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 TUBGCP3Q96CW5 907 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 UGT1A7Q9HAW7 530 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 UGT1A10Q9HAW8 530 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 UGT1A8Q9HAW9 530 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 ARHGEF5Q12774 1597 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 ADGBQ8N7X0 1667 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 ALOX15P16050 662 aaPredicted RBP8.18□□□□□ -1.1
SMG1-202ENST00000446231 SESN2P58004 480 aaPredicted RBP8.18□□□□□ -1.1
SMG1-202ENST00000446231 MPP3Q13368 585 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 ACVR2BQ13705 512 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 DMC1Q14565 340 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 RIOK1Q9BRS2 568 aaKnown RBP8.18□□□□□ -1.1
SMG1-202ENST00000446231 SLC12A6Q9UHW9 1150 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 IPPQ9Y573 584 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 GPC6Q9Y625 555 aaPredicted RBP8.18□□□□□ -1.1
SMG1-202ENST00000446231 YARSP54577 528 aaKnown RBP8.18□□□□□ -1.1
SMG1-202ENST00000446231 KYAT3Q6YP21 454 aaKnown RBP8.18□□□□□ -1.1
SMG1-202ENST00000446231 TIPINQ9BVW5 301 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 CADM1Q9BY67 442 aaKnown RBP8.18□□□□□ -1.1
SMG1-202ENST00000446231 DOLKQ9UPQ8 538 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 A6NHS1 94 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 PRELPP51888 382 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 SEL1L3Q68CR1 1132 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 HPS1Q92902 700 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 ATP6V1E2Q96A05 226 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 NUDT12Q9BQG2 462 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 RUSC1Q9BVN2 902 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 KRT6AP02538 564 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 KRT6BP04259 564 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 ITKQ08881 620 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 DHFR2Q86XF0 187 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 EXD1Q8NHP7 514 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 TAS2R14Q9NYV8 317 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 HESX1Q9UBX0 185 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 FAM25AB3EWG3 89 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 FAM25CB3EWG5 89 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 FAM25GB3EWG6 89 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 FANCGO15287 622 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 ARL4AP40617 200 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 SLC1A6P48664 564 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 BFSP2Q13515 415 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 REEP2Q9BRK0 252 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 RAD21L1Q9H4I0 556 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 TCF7L2Q9NQB0 619 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 ETNK2Q9NVF9 386 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 NCANO14594 1321 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 CROCCQ5TZA2 2017 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 MYH11P35749 1972 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 EIF3DO15371 548 aaKnown RBP eCLIP8.17□□□□□ -1.15e-7■□□□□ 10.7
SMG1-202ENST00000446231 CNOT3O75175 753 aaKnown RBP8.17□□□□□ -1.1
SMG1-202ENST00000446231 DDHD2O94830 711 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 TRIM28Q13263 835 aaKnown RBP8.17□□□□□ -1.1
SMG1-202ENST00000446231 EPHA7Q15375 998 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 PPP6R3Q5H9R7 873 aaPredicted RBP8.17□□□□□ -1.1
SMG1-202ENST00000446231 ZNF219Q9P2Y4 722 aaPredicted RBP8.17□□□□□ -1.1
SMG1-202ENST00000446231 PIGHQ14442 188 aaPredicted RBP8.17□□□□□ -1.1
SMG1-202ENST00000446231 OR6B2Q6IFH4 312 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 SKA1Q96BD8 255 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 MCRS1Q96EZ8 462 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 KDM6AO15550 1401 aaPredicted RBP8.17□□□□□ -1.1
SMG1-202ENST00000446231 CST8O60676 142 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 H2AFYO75367 372 aaKnown RBP8.17□□□□□ -1.1
SMG1-202ENST00000446231 ALOX12P18054 663 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 SLC5A3P53794 718 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 PKN1Q16512 942 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 SCAIQ8N9R8 606 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 EXT2Q93063 718 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 FRMD8Q9BZ67 464 aaPredicted RBP8.17□□□□□ -1.1
SMG1-202ENST00000446231 ASPSCR1Q9BZE9 553 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 NOL6Q9H6R4 1146 aaKnown RBP8.17□□□□□ -1.1
SMG1-202ENST00000446231 CAMK1DQ8IU85 385 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 ANGPTL3Q9Y5C1 460 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 V9GYQ6 96 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 ERVV-1B6SEH8 477 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 DNALI1O14645 258 aaPredicted RBP8.17□□□□□ -1.1
SMG1-202ENST00000446231 SNX2O60749 519 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 PDK1Q15118 436 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms