RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 CCDC114Q96M63 670 aa16.5■□□□□ 0.23
SNX13-204ENST00000444712 HEMGNQ9BXL5 484 aa16.5■□□□□ 0.23
SNX13-204ENST00000444712 CFHR5Q9BXR6 569 aa16.5■□□□□ 0.23
SNX13-204ENST00000444712 RNF39Q9H2S5 420 aa16.5■□□□□ 0.23
SNX13-204ENST00000444712 TJP2Q9UDY2 1190 aa16.5■□□□□ 0.23
SNX13-204ENST00000444712 ASIC3Q9UHC3 531 aa16.5■□□□□ 0.23
SNX13-204ENST00000444712 THSD7BQ9C0I4 1608 aa16.5■□□□□ 0.23
SNX13-204ENST00000444712 LRRD1A4D1F6 860 aa16.49■□□□□ 0.23
SNX13-204ENST00000444712 PFKMP08237 780 aa16.49■□□□□ 0.23
SNX13-204ENST00000444712 PRKAR2AP13861 404 aaKnown RBP16.49■□□□□ 0.23
SNX13-204ENST00000444712 RAB27AP51159 221 aa16.49■□□□□ 0.23
SNX13-204ENST00000444712 BCAT1P54687 386 aa16.49■□□□□ 0.23
SNX13-204ENST00000444712 MGAT3Q09327 533 aa16.49■□□□□ 0.23
SNX13-204ENST00000444712 BST2Q10589 180 aaKnown RBP16.49■□□□□ 0.23
SNX13-204ENST00000444712 SNX1Q13596 522 aa16.49■□□□□ 0.23
SNX13-204ENST00000444712 MFSD7Q6UXD7 560 aa16.49■□□□□ 0.23
SNX13-204ENST00000444712 ZNF365Q70YC5 407 aa16.49■□□□□ 0.23
SNX13-204ENST00000444712 C12orf29Q8N999 325 aa16.49■□□□□ 0.23
SNX13-204ENST00000444712 TTC13Q8NBP0 860 aa16.49■□□□□ 0.23
SNX13-204ENST00000444712 RIN2Q8WYP3 895 aaPredicted RBP16.49■□□□□ 0.23
SNX13-204ENST00000444712 PIK3R5Q8WYR1 880 aa16.49■□□□□ 0.23
SNX13-204ENST00000444712 SNF8Q96H20 258 aa16.49■□□□□ 0.23
SNX13-204ENST00000444712 PPP1R10Q96QC0 940 aaKnown RBP16.49■□□□□ 0.23
SNX13-204ENST00000444712 CNPY3Q9BT09 278 aa16.49■□□□□ 0.23
SNX13-204ENST00000444712 SLC4A5Q9BY07 1137 aa16.49■□□□□ 0.23
SNX13-204ENST00000444712 GIT1Q9Y2X7 761 aa16.49■□□□□ 0.23
SNX13-204ENST00000444712 SRCAPQ6ZRS2 3230 aa16.49■□□□□ 0.23
SNX13-204ENST00000444712 hCG_1818297A0A087WSY0 165 aa16.48■□□□□ 0.23
SNX13-204ENST00000444712 E5RJQ4 531 aa16.48■□□□□ 0.23
SNX13-204ENST00000444712 KIF3CO14782 793 aa16.48■□□□□ 0.23
SNX13-204ENST00000444712 WARSP23381 471 aaKnown RBP16.48■□□□□ 0.23
SNX13-204ENST00000444712 SCNN1AP37088 669 aa16.48■□□□□ 0.23
SNX13-204ENST00000444712 ACADSBP45954 432 aa16.48■□□□□ 0.23
SNX13-204ENST00000444712 KCNA10Q16322 511 aa16.48■□□□□ 0.23
SNX13-204ENST00000444712 ZDHHC24Q6UX98 284 aa16.48■□□□□ 0.23
SNX13-204ENST00000444712 FAM183BPQ6ZVS7 135 aa16.48■□□□□ 0.23
SNX13-204ENST00000444712 TMEM110Q86TL2 294 aa16.48■□□□□ 0.23
SNX13-204ENST00000444712 FBXO25Q8TCJ0 367 aa16.48■□□□□ 0.23
SNX13-204ENST00000444712 HERPUD2Q9BSE4 406 aa16.48■□□□□ 0.23
SNX13-204ENST00000444712 TXLNGYQ9BZA5 131 aa16.48■□□□□ 0.23
SNX13-204ENST00000444712 DPYSL4O14531 572 aa16.48■□□□□ 0.23
SNX13-204ENST00000444712 CDKN2BP42772 138 aa16.48■□□□□ 0.23
SNX13-204ENST00000444712 LILRA4P59901 499 aa16.48■□□□□ 0.23
SNX13-204ENST00000444712 CEP128Q6ZU80 1094 aa16.48■□□□□ 0.23
SNX13-204ENST00000444712 CROCCP2Q86T23 111 aa16.48■□□□□ 0.23
SNX13-204ENST00000444712 RNF180Q86T96 592 aa16.48■□□□□ 0.23
SNX13-204ENST00000444712 ADGRF2Q8IZF7 708 aa16.48■□□□□ 0.23
SNX13-204ENST00000444712 ANKRD52Q8NB46 1076 aa16.48■□□□□ 0.23
SNX13-204ENST00000444712 SLC35F5Q8WV83 523 aa16.48■□□□□ 0.23
SNX13-204ENST00000444712 KBTBD7Q8WVZ9 684 aa16.48■□□□□ 0.23
SNX13-204ENST00000444712 ATG4AQ8WYN0 398 aa16.48■□□□□ 0.23
SNX13-204ENST00000444712 PRDM10Q9NQV6 1147 aa16.48■□□□□ 0.23
SNX13-204ENST00000444712 FAM49BQ9NUQ9 324 aa16.48■□□□□ 0.23
SNX13-204ENST00000444712 C2CD4BA6NLJ0 364 aa16.47■□□□□ 0.23
SNX13-204ENST00000444712 A6NNZ2 444 aa16.47■□□□□ 0.23
SNX13-204ENST00000444712 HMGB1P1B2RPK0 211 aaPredicted RBP16.47■□□□□ 0.23
SNX13-204ENST00000444712 PI4K2BG5E9Z4 385 aa16.47■□□□□ 0.23
SNX13-204ENST00000444712 PTGESO14684 152 aa16.47■□□□□ 0.23
SNX13-204ENST00000444712 CHRNA1P02708 482 aa16.47■□□□□ 0.23
SNX13-204ENST00000444712 ATF2P15336 505 aa16.47■□□□□ 0.23
SNX13-204ENST00000444712 TCF4P15884 667 aa16.47■□□□□ 0.23
SNX13-204ENST00000444712 PMS2P54278 862 aa16.47■□□□□ 0.23
SNX13-204ENST00000444712 SLC8A3P57103 927 aa16.47■□□□□ 0.23
SNX13-204ENST00000444712 SLC6A3Q01959 620 aa16.47■□□□□ 0.23
SNX13-204ENST00000444712 LLGL1Q15334 1064 aa16.47■□□□□ 0.23
SNX13-204ENST00000444712 UAP1Q16222 522 aaPredicted RBP16.47■□□□□ 0.23
SNX13-204ENST00000444712 PTGISQ16647 500 aa16.47■□□□□ 0.23
SNX13-204ENST00000444712 TUBB8Q3ZCM7 444 aa16.47■□□□□ 0.23
SNX13-204ENST00000444712 ATP13A4Q4VNC1 1196 aa16.47■□□□□ 0.23
SNX13-204ENST00000444712 TTC30AQ86WT1 665 aa16.47■□□□□ 0.23
SNX13-204ENST00000444712 EMC1Q8N766 993 aa16.47■□□□□ 0.23
SNX13-204ENST00000444712 ARRDC4Q8NCT1 418 aa16.47■□□□□ 0.23
SNX13-204ENST00000444712 TRAIPQ9BWF2 469 aa16.47■□□□□ 0.23
SNX13-204ENST00000444712 SRRDQ9UH36 339 aa16.47■□□□□ 0.23
SNX13-204ENST00000444712 DRG1Q9Y295 367 aaKnown RBP16.47■□□□□ 0.23
SNX13-204ENST00000444712 ATP8A1Q9Y2Q0 1164 aa16.47■□□□□ 0.23
SNX13-204ENST00000444712 LIASO43766 372 aa16.46■□□□□ 0.23
SNX13-204ENST00000444712 CAND2O75155 1236 aa16.46■□□□□ 0.23
SNX13-204ENST00000444712 THP07101 528 aa16.46■□□□□ 0.23
SNX13-204ENST00000444712 CTSHP09668 335 aa16.46■□□□□ 0.23
SNX13-204ENST00000444712 MYZAPP0CAP1 466 aa16.46■□□□□ 0.23
SNX13-204ENST00000444712 SKIP12755 728 aa16.46■□□□□ 0.23
SNX13-204ENST00000444712 CCND3P30281 292 aaPredicted RBP16.46■□□□□ 0.23
SNX13-204ENST00000444712 FLT3P36888 993 aa16.46■□□□□ 0.23
SNX13-204ENST00000444712 SOX4Q06945 474 aaPredicted RBP16.46■□□□□ 0.23
SNX13-204ENST00000444712 DMTNQ08495 405 aa16.46■□□□□ 0.23
SNX13-204ENST00000444712 TRIM32Q13049 653 aa16.46■□□□□ 0.23
SNX13-204ENST00000444712 PTK7Q13308 1070 aa16.46■□□□□ 0.23
SNX13-204ENST00000444712 CEP85LQ5SZL2 805 aa16.46■□□□□ 0.23
SNX13-204ENST00000444712 KAZNQ674X7 775 aa16.46■□□□□ 0.23
SNX13-204ENST00000444712 CCSAPQ6IQ19 270 aaPredicted RBP16.46■□□□□ 0.23
SNX13-204ENST00000444712 ARCQ7LC44 396 aa16.46■□□□□ 0.23
SNX13-204ENST00000444712 CAPNS2Q96L46 248 aa16.46■□□□□ 0.23
SNX13-204ENST00000444712 PABPC3Q9H361 631 aaKnown RBP16.46■□□□□ 0.23
SNX13-204ENST00000444712 ZWILCHQ9H900 591 aa16.46■□□□□ 0.23
SNX13-204ENST00000444712 KLHL11Q9NVR0 708 aa16.46■□□□□ 0.23
SNX13-204ENST00000444712 USP18Q9UMW8 372 aa16.46■□□□□ 0.23
SNX13-204ENST00000444712 R3HDM2Q9Y2K5 976 aaKnown RBP16.46■□□□□ 0.23
SNX13-204ENST00000444712 SQORQ9Y6N5 450 aa16.46■□□□□ 0.23
SNX13-204ENST00000444712 TDRD15B5MCY1 1934 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms