RNA–Protein interactions for RNA: ENST00000443289.5

ATG4C-205, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 2

Gene ATG4C, Length 603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-205ENST00000443289 CCDC142Q17RM4 750 aa17.4■□□□□ 0.38
ATG4C-205ENST00000443289 KLHL10Q6JEL2 608 aa17.4■□□□□ 0.38
ATG4C-205ENST00000443289 MON1AQ86VX9 555 aa17.4■□□□□ 0.38
ATG4C-205ENST00000443289 MAB21L3Q8N8X9 362 aa17.4■□□□□ 0.38
ATG4C-205ENST00000443289 MYCBPAPQ8TBZ2 947 aa17.4■□□□□ 0.38
ATG4C-205ENST00000443289 TMC2Q8TDI7 906 aa17.4■□□□□ 0.38
ATG4C-205ENST00000443289 NKD2Q969F2 451 aaPredicted RBP17.4■□□□□ 0.38
ATG4C-205ENST00000443289 MYLPFQ96A32 169 aa17.4■□□□□ 0.38
ATG4C-205ENST00000443289 SPATA17Q96L03 361 aa17.4■□□□□ 0.38
ATG4C-205ENST00000443289 LRRC3BQ96PB8 259 aa17.4■□□□□ 0.38
ATG4C-205ENST00000443289 MRPL45Q9BRJ2 306 aaKnown RBP17.4■□□□□ 0.38
ATG4C-205ENST00000443289 XYLT2Q9H1B5 865 aa17.4■□□□□ 0.38
ATG4C-205ENST00000443289 SEMA4AQ9H3S1 761 aa17.4■□□□□ 0.38
ATG4C-205ENST00000443289 NXF1Q9UBU9 619 aaKnown RBP17.4■□□□□ 0.38
ATG4C-205ENST00000443289 ZFHX2Q9C0A1 2572 aaPredicted RBP17.39■□□□□ 0.38
ATG4C-205ENST00000443289 TRIM49BA6NDI0 452 aa17.39■□□□□ 0.37
ATG4C-205ENST00000443289 IKBKBO14920 756 aa17.39■□□□□ 0.37
ATG4C-205ENST00000443289 MBD3O95983 291 aa17.39■□□□□ 0.37
ATG4C-205ENST00000443289 SP9P0CG40 484 aa17.39■□□□□ 0.37
ATG4C-205ENST00000443289 PTPN1P18031 435 aaKnown RBP17.39■□□□□ 0.37
ATG4C-205ENST00000443289 BDNFP23560 247 aa17.39■□□□□ 0.37
ATG4C-205ENST00000443289 KPNA1P52294 538 aaPredicted RBP17.39■□□□□ 0.37
ATG4C-205ENST00000443289 CYP27A1Q02318 531 aa17.39■□□□□ 0.37
ATG4C-205ENST00000443289 FZD5Q13467 585 aa17.39■□□□□ 0.37
ATG4C-205ENST00000443289 NCOA4Q13772 614 aa17.39■□□□□ 0.37
ATG4C-205ENST00000443289 NFIL3Q16649 462 aa17.39■□□□□ 0.37
ATG4C-205ENST00000443289 TDRD10Q5VZ19 366 aaKnown RBP17.39■□□□□ 0.37
ATG4C-205ENST00000443289 CEP135Q66GS9 1140 aa17.39■□□□□ 0.37
ATG4C-205ENST00000443289 ADSSL1Q8N142 457 aa17.39■□□□□ 0.37
ATG4C-205ENST00000443289 EEF2KMTQ96G04 330 aa17.39■□□□□ 0.37
ATG4C-205ENST00000443289 TDP1Q9NUW8 608 aa17.39■□□□□ 0.37
ATG4C-205ENST00000443289 FBXO4Q9UKT5 387 aa17.39■□□□□ 0.37
ATG4C-205ENST00000443289 NDRG2Q9UN36 371 aaKnown RBP17.39■□□□□ 0.37
ATG4C-205ENST00000443289 CTNND2Q9UQB3 1225 aa17.39■□□□□ 0.37
ATG4C-205ENST00000443289 F5P12259 2224 aa17.39■□□□□ 0.37
ATG4C-205ENST00000443289 PRR23AA6NEV1 266 aa17.38■□□□□ 0.37
ATG4C-205ENST00000443289 A8MXQ7 604 aa17.38■□□□□ 0.37
ATG4C-205ENST00000443289 TRIM66O15016 1216 aa17.38■□□□□ 0.37
ATG4C-205ENST00000443289 MAPK13O15264 365 aa17.38■□□□□ 0.37
ATG4C-205ENST00000443289 CCNE1P24864 410 aa17.38■□□□□ 0.37
ATG4C-205ENST00000443289 RPL13P26373 211 aaKnown RBP17.38■□□□□ 0.37
ATG4C-205ENST00000443289 GRIK1P39086 918 aa17.38■□□□□ 0.37
ATG4C-205ENST00000443289 PMS1P54277 932 aaKnown RBP17.38■□□□□ 0.37
ATG4C-205ENST00000443289 ZNF699Q32M78 642 aa17.38■□□□□ 0.37
ATG4C-205ENST00000443289 ZNF528Q3MIS6 628 aa17.38■□□□□ 0.37
ATG4C-205ENST00000443289 ZNF667Q5HYK9 610 aa17.38■□□□□ 0.37
ATG4C-205ENST00000443289 MDH1BQ5I0G3 518 aa17.38■□□□□ 0.37
ATG4C-205ENST00000443289 TXNDC8Q6A555 127 aa17.38■□□□□ 0.37
ATG4C-205ENST00000443289 ZC3H14Q6PJT7 736 aaKnown RBP17.38■□□□□ 0.37
ATG4C-205ENST00000443289 ASCL5Q7RTU5 278 aa17.38■□□□□ 0.37
ATG4C-205ENST00000443289 ZNF687Q8N1G0 1237 aa17.38■□□□□ 0.37
ATG4C-205ENST00000443289 STKLD1Q8NE28 680 aa17.38■□□□□ 0.37
ATG4C-205ENST00000443289 PCED1BQ96HM7 432 aa17.38■□□□□ 0.37
ATG4C-205ENST00000443289 IER2Q9BTL4 223 aa17.38■□□□□ 0.37
ATG4C-205ENST00000443289 KIF9Q9HAQ2 790 aa17.38■□□□□ 0.37
ATG4C-205ENST00000443289 EHD2Q9NZN4 543 aa17.38■□□□□ 0.37
ATG4C-205ENST00000443289 COL4A3Q01955 1670 aa17.38■□□□□ 0.37
ATG4C-205ENST00000443289 MIA3Q5JRA6 1907 aa17.37■□□□□ 0.37
ATG4C-205ENST00000443289 P4HA1P13674 534 aa17.37■□□□□ 0.37
ATG4C-205ENST00000443289 NR2F2P24468 414 aa17.37■□□□□ 0.37
ATG4C-205ENST00000443289 ANXA13P27216 316 aa17.37■□□□□ 0.37
ATG4C-205ENST00000443289 DLG4P78352 724 aa17.37■□□□□ 0.37
ATG4C-205ENST00000443289 STIM1Q13586 685 aa17.37■□□□□ 0.37
ATG4C-205ENST00000443289 ZNF268Q14587 947 aaPredicted RBP17.37■□□□□ 0.37
ATG4C-205ENST00000443289 SGSM1Q2NKQ1 1148 aa17.37■□□□□ 0.37
ATG4C-205ENST00000443289 ZACNQ401N2 412 aa17.37■□□□□ 0.37
ATG4C-205ENST00000443289 ZCWPW2Q504Y3 356 aa17.37■□□□□ 0.37
ATG4C-205ENST00000443289 RALGPS2Q86X27 583 aaPredicted RBP17.37■□□□□ 0.37
ATG4C-205ENST00000443289 MAML2Q8IZL2 1156 aaPredicted RBP17.37■□□□□ 0.37
ATG4C-205ENST00000443289 TAF4BQ92750 862 aa17.37■□□□□ 0.37
ATG4C-205ENST00000443289 USP13Q92995 863 aaPredicted RBP17.37■□□□□ 0.37
ATG4C-205ENST00000443289 ZFYVE19Q96K21 471 aa17.37■□□□□ 0.37
ATG4C-205ENST00000443289 SMG9Q9H0W8 520 aaKnown RBP17.37■□□□□ 0.37
ATG4C-205ENST00000443289 LMAN1LQ9HAT1 526 aa17.37■□□□□ 0.37
ATG4C-205ENST00000443289 NUP210Q8TEM1 1887 aaPredicted RBP17.36■□□□□ 0.37
ATG4C-205ENST00000443289 PPP1R3GB7ZBB8 358 aa17.36■□□□□ 0.37
ATG4C-205ENST00000443289 PSMA7O14818 248 aa17.36■□□□□ 0.37
ATG4C-205ENST00000443289 CLSTN1O94985 981 aa17.36■□□□□ 0.37
ATG4C-205ENST00000443289 VNN1O95497 513 aa17.36■□□□□ 0.37
ATG4C-205ENST00000443289 VAMP7P51809 220 aa17.36■□□□□ 0.37
ATG4C-205ENST00000443289 STX17P56962 302 aa17.36■□□□□ 0.37
ATG4C-205ENST00000443289 ENPEPQ07075 957 aa17.36■□□□□ 0.37
ATG4C-205ENST00000443289 COBLL1Q53SF7 1204 aa17.36■□□□□ 0.37
ATG4C-205ENST00000443289 ANKRD40Q6AI12 368 aa17.36■□□□□ 0.37
ATG4C-205ENST00000443289 MAMSTRQ6ZN01 415 aa17.36■□□□□ 0.37
ATG4C-205ENST00000443289 DENND5BQ6ZUT9 1274 aa17.36■□□□□ 0.37
ATG4C-205ENST00000443289 SV2AQ7L0J3 742 aa17.36■□□□□ 0.37
ATG4C-205ENST00000443289 B3GALNT2Q8NCR0 500 aa17.36■□□□□ 0.37
ATG4C-205ENST00000443289 NELFBQ8WX92 580 aa17.36■□□□□ 0.37
ATG4C-205ENST00000443289 C8orf48Q96LL4 319 aa17.36■□□□□ 0.37
ATG4C-205ENST00000443289 TSG101Q99816 390 aa17.36■□□□□ 0.37
ATG4C-205ENST00000443289 ELOVL4Q9GZR5 314 aa17.36■□□□□ 0.37
ATG4C-205ENST00000443289 CHRDQ9H2X0 955 aa17.36■□□□□ 0.37
ATG4C-205ENST00000443289 GKN1Q9NS71 199 aa17.36■□□□□ 0.37
ATG4C-205ENST00000443289 GTSE1Q9NYZ3 720 aa17.36■□□□□ 0.37
ATG4C-205ENST00000443289 NME7Q9Y5B8 376 aa17.36■□□□□ 0.37
ATG4C-205ENST00000443289 CACNA1IQ9P0X4 2223 aa17.36■□□□□ 0.37
ATG4C-205ENST00000443289 TRAV19A0A0A6YYK7 116 aa17.35■□□□□ 0.37
ATG4C-205ENST00000443289 SPECC1L-ADORA2AF8WAN1 911 aa17.35■□□□□ 0.37
ATG4C-205ENST00000443289 TADA3O75528 432 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms