RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 C2orf27AQ580R0 203 aa15.49■□□□□ 0.07
HMGN1-208ENST00000443046 ANO7Q6IWH7 933 aa15.49■□□□□ 0.07
HMGN1-208ENST00000443046 PDCL2Q8N4E4 241 aa15.49■□□□□ 0.07
HMGN1-208ENST00000443046 MYCT1Q8N699 235 aa15.49■□□□□ 0.07
HMGN1-208ENST00000443046 PIGKQ92643 395 aa15.49■□□□□ 0.07
HMGN1-208ENST00000443046 FNBP1Q96RU3 617 aa15.49■□□□□ 0.07
HMGN1-208ENST00000443046 PARVGQ9HBI0 331 aa15.49■□□□□ 0.07
HMGN1-208ENST00000443046 TMEM74BQ9NUR3 256 aa15.49■□□□□ 0.07
HMGN1-208ENST00000443046 BPTFQ12830 3046 aa15.49■□□□□ 0.07
HMGN1-208ENST00000443046 C2orf78A6NCI8 922 aa15.48■□□□□ 0.07
HMGN1-208ENST00000443046 TISP43B9A030 160 aa15.48■□□□□ 0.07
HMGN1-208ENST00000443046 SLC26A4O43511 780 aa15.48■□□□□ 0.07
HMGN1-208ENST00000443046 HYAL3O43820 417 aaPredicted RBP15.48■□□□□ 0.07
HMGN1-208ENST00000443046 CKMP06732 381 aa15.48■□□□□ 0.07
HMGN1-208ENST00000443046 DHPSP49366 369 aaPredicted RBP15.48■□□□□ 0.07
HMGN1-208ENST00000443046 SEMA3BQ13214 749 aa15.48■□□□□ 0.07
HMGN1-208ENST00000443046 UAP1L1Q3KQV9 507 aa15.48■□□□□ 0.07
HMGN1-208ENST00000443046 CFAP221Q4G0U5 840 aa15.48■□□□□ 0.07
HMGN1-208ENST00000443046 ZC2HC1CQ53FD0 456 aaPredicted RBP15.48■□□□□ 0.07
HMGN1-208ENST00000443046 TRIM61Q5EBN2 209 aa15.48■□□□□ 0.07
HMGN1-208ENST00000443046 INTS6LQ5JSJ4 861 aaKnown RBP15.48■□□□□ 0.07
HMGN1-208ENST00000443046 PEAR1Q5VY43 1037 aaPredicted RBP15.48■□□□□ 0.07
HMGN1-208ENST00000443046 ADALQ6DHV7 355 aa15.48■□□□□ 0.07
HMGN1-208ENST00000443046 TMEM92Q6UXU6 159 aa15.48■□□□□ 0.07
HMGN1-208ENST00000443046 NT5DC4Q86YG4 428 aa15.48■□□□□ 0.07
HMGN1-208ENST00000443046 ARL14EPQ8N8R7 260 aaPredicted RBP15.48■□□□□ 0.07
HMGN1-208ENST00000443046 FAM184AQ8NB25 1140 aa15.48■□□□□ 0.07
HMGN1-208ENST00000443046 CXorf38Q8TB03 319 aa15.48■□□□□ 0.07
HMGN1-208ENST00000443046 SH3RF2Q8TEC5 729 aa15.48■□□□□ 0.07
HMGN1-208ENST00000443046 ST6GALNAC4Q9H4F1 302 aa15.48■□□□□ 0.07
HMGN1-208ENST00000443046 TRPC7Q9HCX4 862 aa15.48■□□□□ 0.07
HMGN1-208ENST00000443046 AGO2Q9UKV8 859 aaKnown RBP15.48■□□□□ 0.07
HMGN1-208ENST00000443046 L1RE1Q9UN81 338 aa15.48■□□□□ 0.07
HMGN1-208ENST00000443046 ARHGAP26Q9UNA1 814 aa15.48■□□□□ 0.07
HMGN1-208ENST00000443046 SETXQ7Z333 2677 aaKnown RBP15.48■□□□□ 0.07
HMGN1-208ENST00000443046 A0A0A0MRY4 1105 aa15.47■□□□□ 0.07
HMGN1-208ENST00000443046 VWA3AA6NCI4 1184 aa15.47■□□□□ 0.07
HMGN1-208ENST00000443046 TAF4O00268 1085 aa15.47■□□□□ 0.07
HMGN1-208ENST00000443046 NFATC1O95644 943 aa15.47■□□□□ 0.07
HMGN1-208ENST00000443046 ADSSP30520 456 aa15.47■□□□□ 0.07
HMGN1-208ENST00000443046 ABCD1P33897 745 aa15.47■□□□□ 0.07
HMGN1-208ENST00000443046 PNPLA4P41247 253 aa15.47■□□□□ 0.07
HMGN1-208ENST00000443046 PTGER3P43115 390 aa15.47■□□□□ 0.07
HMGN1-208ENST00000443046 SEC13P55735 322 aa15.47■□□□□ 0.07
HMGN1-208ENST00000443046 MRPS21P82921 87 aaKnown RBP15.47■□□□□ 0.07
HMGN1-208ENST00000443046 RILPL1Q5EBL4 403 aa15.47■□□□□ 0.07
HMGN1-208ENST00000443046 SPDYCQ5MJ68 293 aa15.47■□□□□ 0.07
HMGN1-208ENST00000443046 ARL6IP4Q66PJ3 421 aaKnown RBP15.47■□□□□ 0.07
HMGN1-208ENST00000443046 SLFN12LQ6IEE8 588 aa15.47■□□□□ 0.07
HMGN1-208ENST00000443046 SLC23A3Q6PIS1 610 aa15.47■□□□□ 0.07
HMGN1-208ENST00000443046 GPBP1Q86WP2 473 aa15.47■□□□□ 0.07
HMGN1-208ENST00000443046 SYT12Q8IV01 421 aa15.47■□□□□ 0.07
HMGN1-208ENST00000443046 KIAA1958Q8N8K9 716 aa15.47■□□□□ 0.07
HMGN1-208ENST00000443046 ZNF560Q96MR9 790 aa15.47■□□□□ 0.07
HMGN1-208ENST00000443046 BLOC1S4Q9NUP1 217 aa15.47■□□□□ 0.07
HMGN1-208ENST00000443046 MBD1Q9UIS9 605 aaPredicted RBP15.47■□□□□ 0.07
HMGN1-208ENST00000443046 KLK13Q9UKR3 277 aa15.47■□□□□ 0.07
HMGN1-208ENST00000443046 LHX6Q9UPM6 363 aa15.47■□□□□ 0.07
HMGN1-208ENST00000443046 MYO18AQ92614 2054 aaKnown RBP15.47■□□□□ 0.07
HMGN1-208ENST00000443046 FAM13AO94988 1023 aa15.46■□□□□ 0.07
HMGN1-208ENST00000443046 ENGP17813 658 aa15.46■□□□□ 0.07
HMGN1-208ENST00000443046 PFKLP17858 780 aa15.46■□□□□ 0.07
HMGN1-208ENST00000443046 HDCP19113 662 aa15.46■□□□□ 0.07
HMGN1-208ENST00000443046 WNT7BP56706 349 aa15.46■□□□□ 0.07
HMGN1-208ENST00000443046 MESP2Q0VG99 397 aa15.46■□□□□ 0.07
HMGN1-208ENST00000443046 MAP7D1Q3KQU3 841 aa15.46■□□□□ 0.07
HMGN1-208ENST00000443046 SCARA3Q6AZY7 606 aa15.46■□□□□ 0.07
HMGN1-208ENST00000443046 KIAA1211LQ6NV74 962 aa15.46■□□□□ 0.07
HMGN1-208ENST00000443046 LPCAT2Q7L5N7 544 aa15.46■□□□□ 0.07
HMGN1-208ENST00000443046 ADGRG2Q8IZP9 1017 aa15.46■□□□□ 0.07
HMGN1-208ENST00000443046 TMEM86AQ8N2M4 240 aa15.46■□□□□ 0.07
HMGN1-208ENST00000443046 CCDC33Q8N5R6 958 aa15.46■□□□□ 0.07
HMGN1-208ENST00000443046 FRMD1Q8N878 549 aa15.46■□□□□ 0.07
HMGN1-208ENST00000443046 IL17RCQ8NAC3 791 aa15.46■□□□□ 0.07
HMGN1-208ENST00000443046 SPATA18Q8TC71 538 aa15.46■□□□□ 0.07
HMGN1-208ENST00000443046 RLN3Q8WXF3 142 aa15.46■□□□□ 0.07
HMGN1-208ENST00000443046 FUBP3Q96I24 572 aaKnown RBP eCLIP15.46■□□□□ 0.07
HMGN1-208ENST00000443046 CDK5RAP3Q96JB5 506 aa15.46■□□□□ 0.07
HMGN1-208ENST00000443046 ZSCAN31Q96LW9 406 aaPredicted RBP15.46■□□□□ 0.07
HMGN1-208ENST00000443046 NUSAP1Q9BXS6 441 aaKnown RBP15.46■□□□□ 0.07
HMGN1-208ENST00000443046 SLC32A1Q9H598 525 aa15.46■□□□□ 0.07
HMGN1-208ENST00000443046 DDX43Q9NXZ2 648 aaKnown RBP15.46■□□□□ 0.07
HMGN1-208ENST00000443046 PILRBQ9UKJ0 227 aa15.46■□□□□ 0.07
HMGN1-208ENST00000443046 GTF3C4Q9UKN8 822 aa15.46■□□□□ 0.07
HMGN1-208ENST00000443046 MYOFQ9NZM1 2061 aa15.45■□□□□ 0.06
HMGN1-208ENST00000443046 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.45■□□□□ 0.06
HMGN1-208ENST00000443046 SPAARA0A1B0GVQ0 90 aa15.45■□□□□ 0.06
HMGN1-208ENST00000443046 GABRDO14764 452 aa15.45■□□□□ 0.06
HMGN1-208ENST00000443046 IL18RAPO95256 599 aa15.45■□□□□ 0.06
HMGN1-208ENST00000443046 ACAT1P24752 427 aaKnown RBP15.45■□□□□ 0.06
HMGN1-208ENST00000443046 MAGEA11P43364 429 aa15.45■□□□□ 0.06
HMGN1-208ENST00000443046 CCDC142Q17RM4 750 aa15.45■□□□□ 0.06
HMGN1-208ENST00000443046 HSF5Q4G112 596 aaPredicted RBP15.45■□□□□ 0.06
HMGN1-208ENST00000443046 FAM171BQ6P995 826 aa15.45■□□□□ 0.06
HMGN1-208ENST00000443046 OSTM1Q86WC4 334 aa15.45■□□□□ 0.06
HMGN1-208ENST00000443046 SFTPA1Q8IWL2 248 aa15.45■□□□□ 0.06
HMGN1-208ENST00000443046 TMEFF1Q8IYR6 380 aa15.45■□□□□ 0.06
HMGN1-208ENST00000443046 C1orf127Q8N9H9 656 aa15.45■□□□□ 0.06
HMGN1-208ENST00000443046 FSIP1Q8NA03 581 aa15.45■□□□□ 0.06
HMGN1-208ENST00000443046 AK8Q96MA6 479 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms