RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 GH2P01242 217 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 KRT8P05787 483 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 PAEPP09466 180 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 TGFB3P10600 412 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 GLULP15104 373 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 ZNF12P17014 697 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 CYP7A1P22680 504 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 CDC25AP30304 524 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 SKIV2L2P42285 1042 aaKnown RBP2.9□□□□□ -1.95
LIG4-203ENST00000442234 BTDP43251 543 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 NEK3P51956 506 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 ERVK-24P63145 666 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 CYP4A11Q02928 519 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 FCHO2Q0JRZ9 810 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 AP1B1Q10567 949 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 CUL1Q13616 776 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 ADRM1Q16186 407 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 LONRF1Q17RB8 773 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 TRIM60Q495X7 471 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 RESP18Q5W5W9 173 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 PLEKHA7Q6IQ23 1121 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 KLHDC10Q6PID8 442 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 LPCAT2Q7L5N7 544 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 SFR1Q86XK3 245 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 BBS5Q8N3I7 341 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 FITM2Q8N6M3 262 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 ICA1LQ8NDH6 482 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 TRPC4APQ8TEL6 797 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 GATA6Q92908 595 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 BORCS5Q969J3 196 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 TRIM63Q969Q1 353 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 AZIN2Q96A70 460 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 ZFYVE19Q96K21 471 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 UROC1Q96N76 676 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 CITED4Q96RK1 184 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 TGS1Q96RS0 853 aaKnown RBP2.9□□□□□ -1.95
LIG4-203ENST00000442234 FSD1Q9BTV5 496 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 RTFDC1Q9BY42 306 aaPredicted RBP2.9□□□□□ -1.95
LIG4-203ENST00000442234 ADNPQ9H2P0 1102 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 NOL6Q9H6R4 1146 aaKnown RBP2.9□□□□□ -1.95
LIG4-203ENST00000442234 SP140LQ9H930 580 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 MKNK2Q9HBH9 465 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 TUFT1Q9NNX1 390 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 STARD7Q9NQZ5 370 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 MBIPQ9NS73 344 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 INTS13Q9NVM9 706 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 THAP1Q9NVV9 213 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 MCM9Q9NXL9 1143 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 ZNF212Q9UDV6 495 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 ZFP69BQ9UJL9 534 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 A0A0B4J203 849 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 ARHGAP42A6NI28 874 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 A6NL46 340 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 H0Y858 1186 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 KPNA4O00629 521 aaPredicted RBP2.9□□□□□ -1.95
LIG4-203ENST00000442234 GIPC1O14908 333 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 BUB1O43683 1085 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 EXTL3O43909 919 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 KATNA1O75449 491 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 BAIAP3O94812 1187 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 GAS8O95995 478 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 KRT3P12035 628 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 SLC5A1P13866 664 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 NR4A1P22736 598 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 RPS6KB1P23443 525 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 JAK1P23458 1154 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 CMA1P23946 247 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 TXKP42681 527 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 SLC9A3P48764 834 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 ENTPD1P49961 510 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 TPTEP56180 551 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 TAGLNQ01995 201 aaKnown RBP2.9□□□□□ -1.95
LIG4-203ENST00000442234 GRIN2CQ14957 1233 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 PON2Q15165 354 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 PKN2Q16513 984 aaKnown RBP2.9□□□□□ -1.95
LIG4-203ENST00000442234 EDRF1Q3B7T1 1238 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 TIGD2Q4W5G0 525 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 FAM47AQ5JRC9 791 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 SPDYCQ5MJ68 293 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 SNAP47Q5SQN1 464 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 FIP1L1Q6UN15 594 aaKnown RBP2.9□□□□□ -1.95
LIG4-203ENST00000442234 SH3RF1Q7Z6J0 888 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 CAND1Q86VP6 1230 aaKnown RBP2.9□□□□□ -1.95
LIG4-203ENST00000442234 RELL1Q8IUW5 271 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 CCDC28AQ8IWP9 274 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 SLC38A6Q8IZM9 456 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 DEPDC4Q8N2C3 294 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 LSMEM1Q8N8F7 131 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 RDH13Q8NBN7 331 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 LILRB4Q8NHJ6 448 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 EXD1Q8NHP7 514 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.9□□□□□ -1.95
LIG4-203ENST00000442234 ADAMTS19Q8TE59 1207 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 KCTD4Q8WVF5 259 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 FAM136AQ96C01 138 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 USB1Q9BQ65 265 aaKnown RBP2.9□□□□□ -1.95
LIG4-203ENST00000442234 ECSITQ9BQ95 431 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 LSG1Q9H089 658 aaKnown RBP2.9□□□□□ -1.95
LIG4-203ENST00000442234 NT5C3AQ9H0P0 336 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 ALDH8A1Q9H2A2 487 aaPredicted RBP2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms