RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 STXBP5LQ9Y2K9 1186 aa8.53□□□□□ -1.04
CCDC39-201ENST00000442201 PCDHB7Q9Y5E2 793 aa8.53□□□□□ -1.04
CCDC39-201ENST00000442201 SHOX2O60902 331 aaPredicted RBP8.53□□□□□ -1.04
CCDC39-201ENST00000442201 RTN3O95197 1032 aaPredicted RBP8.53□□□□□ -1.04
CCDC39-201ENST00000442201 CXCL10P02778 98 aa8.53□□□□□ -1.04
CCDC39-201ENST00000442201 PDGFRBP09619 1106 aa8.53□□□□□ -1.04
CCDC39-201ENST00000442201 FGFR1P11362 822 aa8.53□□□□□ -1.04
CCDC39-201ENST00000442201 WARSP23381 471 aaKnown RBP8.53□□□□□ -1.04
CCDC39-201ENST00000442201 CLLU1OSQ5K130 101 aa8.53□□□□□ -1.04
CCDC39-201ENST00000442201 WSCD1Q658N2 575 aa8.53□□□□□ -1.04
CCDC39-201ENST00000442201 RSRC2Q7L4I2 434 aaKnown RBP8.53□□□□□ -1.04
CCDC39-201ENST00000442201 CRYBG2Q8N1P7 616 aa8.53□□□□□ -1.04
CCDC39-201ENST00000442201 TMEM86AQ8N2M4 240 aa8.53□□□□□ -1.04
CCDC39-201ENST00000442201 CEP112Q8N8E3 955 aa8.53□□□□□ -1.04
CCDC39-201ENST00000442201 C12orf29Q8N999 325 aa8.53□□□□□ -1.04
CCDC39-201ENST00000442201 C3orf58Q8NDZ4 430 aa8.53□□□□□ -1.04
CCDC39-201ENST00000442201 RABGGTAQ92696 567 aa8.53□□□□□ -1.04
CCDC39-201ENST00000442201 PAAF1Q9BRP4 392 aa8.53□□□□□ -1.04
CCDC39-201ENST00000442201 HESX1Q9UBX0 185 aa8.53□□□□□ -1.04
CCDC39-201ENST00000442201 TSPAN16Q9UKR8 245 aa8.53□□□□□ -1.04
CCDC39-201ENST00000442201 AMFRQ9UKV5 643 aa8.53□□□□□ -1.04
CCDC39-201ENST00000442201 LRFN2Q9ULH4 789 aa8.53□□□□□ -1.04
CCDC39-201ENST00000442201 SCINQ9Y6U3 715 aa8.53□□□□□ -1.04
CCDC39-201ENST00000442201 CCDC151A5D8V7 595 aa8.53□□□□□ -1.04
CCDC39-201ENST00000442201 SRGAP2O75044 1071 aa8.53□□□□□ -1.04
CCDC39-201ENST00000442201 CLTBP09497 229 aa8.53□□□□□ -1.04
CCDC39-201ENST00000442201 DNA2P51530 1060 aa8.53□□□□□ -1.04
CCDC39-201ENST00000442201 RNASELQ05823 741 aaKnown RBP8.53□□□□□ -1.04
CCDC39-201ENST00000442201 PTP4A2Q12974 167 aa8.53□□□□□ -1.04
CCDC39-201ENST00000442201 MESDQ14696 234 aa8.53□□□□□ -1.04
CCDC39-201ENST00000442201 C11orf63Q6NUN7 778 aa8.53□□□□□ -1.04
CCDC39-201ENST00000442201 NECAB2Q7Z6G3 386 aa8.53□□□□□ -1.04
CCDC39-201ENST00000442201 C3orf20Q8ND61 904 aa8.53□□□□□ -1.04
CCDC39-201ENST00000442201 OSBPL9Q96SU4 736 aa8.53□□□□□ -1.04
CCDC39-201ENST00000442201 PSMB7Q99436 277 aa8.53□□□□□ -1.04
CCDC39-201ENST00000442201 ABCB6Q9NP58 842 aa8.53□□□□□ -1.04
CCDC39-201ENST00000442201 FAM49BQ9NUQ9 324 aa8.53□□□□□ -1.04
CCDC39-201ENST00000442201 PARVAQ9NVD7 372 aa8.53□□□□□ -1.04
CCDC39-201ENST00000442201 STRIP2Q9ULQ0 834 aa8.53□□□□□ -1.04
CCDC39-201ENST00000442201 NME7Q9Y5B8 376 aa8.53□□□□□ -1.04
CCDC39-201ENST00000442201 ANKRD65E5RJM6 399 aa8.52□□□□□ -1.05
CCDC39-201ENST00000442201 KIF4AO95239 1232 aa8.52□□□□□ -1.05
CCDC39-201ENST00000442201 IGFBP6P24592 240 aaPredicted RBP8.52□□□□□ -1.05
CCDC39-201ENST00000442201 LMO2P25791 158 aa8.52□□□□□ -1.05
CCDC39-201ENST00000442201 AARSP49588 968 aaKnown RBP eCLIP8.52□□□□□ -1.05
CCDC39-201ENST00000442201 PPP1R26Q5T8A7 1209 aaPredicted RBP8.52□□□□□ -1.05
CCDC39-201ENST00000442201 ARHGAP17Q68EM7 881 aa8.52□□□□□ -1.05
CCDC39-201ENST00000442201 PLEKHA7Q6IQ23 1121 aa8.52□□□□□ -1.05
CCDC39-201ENST00000442201 DCLRE1AQ6PJP8 1040 aa8.52□□□□□ -1.05
CCDC39-201ENST00000442201 DEFB128Q7Z7B8 93 aa8.52□□□□□ -1.05
CCDC39-201ENST00000442201 PHLDB2Q86SQ0 1253 aa8.52□□□□□ -1.05
CCDC39-201ENST00000442201 NT5DC3Q86UY8 548 aa8.52□□□□□ -1.05
CCDC39-201ENST00000442201 FAM193BQ96PV7 902 aaPredicted RBP8.52□□□□□ -1.05
CCDC39-201ENST00000442201 DPEP3Q9H4B8 488 aa8.52□□□□□ -1.05
CCDC39-201ENST00000442201 SYNCQ9H7C4 482 aa8.52□□□□□ -1.05
CCDC39-201ENST00000442201 VPS18Q9P253 973 aa8.52□□□□□ -1.05
CCDC39-201ENST00000442201 ANAPC7Q9UJX3 599 aa8.52□□□□□ -1.05
CCDC39-201ENST00000442201 PACSIN2Q9UNF0 486 aaPredicted RBP8.52□□□□□ -1.05
CCDC39-201ENST00000442201 ALG6Q9Y672 507 aa8.52□□□□□ -1.05
CCDC39-201ENST00000442201 ARHGEF37A1IGU5 675 aa8.52□□□□□ -1.05
CCDC39-201ENST00000442201 TMEM110-MUSTN1A8MSY1 372 aa8.52□□□□□ -1.05
CCDC39-201ENST00000442201 MYO1FO00160 1098 aa8.52□□□□□ -1.05
CCDC39-201ENST00000442201 GABRDO14764 452 aa8.52□□□□□ -1.05
CCDC39-201ENST00000442201 HOXA2O43364 376 aa8.52□□□□□ -1.05
CCDC39-201ENST00000442201 ODC1P11926 461 aa8.52□□□□□ -1.05
CCDC39-201ENST00000442201 GPD2P43304 727 aa8.52□□□□□ -1.05
CCDC39-201ENST00000442201 LHX1P48742 406 aa8.52□□□□□ -1.05
CCDC39-201ENST00000442201 CKAP4Q07065 602 aaKnown RBP8.52□□□□□ -1.05
CCDC39-201ENST00000442201 BRD3Q15059 726 aa8.52□□□□□ -1.05
CCDC39-201ENST00000442201 PTPROQ16827 1216 aa8.52□□□□□ -1.05
CCDC39-201ENST00000442201 GOLGA7BQ2TAP0 167 aa8.52□□□□□ -1.05
CCDC39-201ENST00000442201 PTPN20Q4JDL3 420 aa8.52□□□□□ -1.05
CCDC39-201ENST00000442201 PAN2Q504Q3 1202 aaKnown RBP8.52□□□□□ -1.05
CCDC39-201ENST00000442201 TIGD5Q53EQ6 642 aa8.52□□□□□ -1.05
CCDC39-201ENST00000442201 OSTM1Q86WC4 334 aa8.52□□□□□ -1.05
CCDC39-201ENST00000442201 UBA3Q8TBC4 463 aa8.52□□□□□ -1.05
CCDC39-201ENST00000442201 C18orf8Q96DM3 657 aa8.52□□□□□ -1.05
CCDC39-201ENST00000442201 CAPZA3Q96KX2 299 aa8.52□□□□□ -1.05
CCDC39-201ENST00000442201 KIF9Q9HAQ2 790 aa8.52□□□□□ -1.05
CCDC39-201ENST00000442201 TBC1D13Q9NVG8 400 aa8.52□□□□□ -1.05
CCDC39-201ENST00000442201 HCRTO43612 131 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 CXCR5P32302 372 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 LIG3P49916 1009 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 DSC1Q08554 894 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 PDCLQ13371 301 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 MAMLD1Q13495 774 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 LRRC26Q2I0M4 334 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 LLGL2Q6P1M3 1020 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 DNAJC24Q6P3W2 148 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 B3GALNT2Q8NCR0 500 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 FAM71BQ8TC56 605 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 AGAP3Q96P47 875 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 MIS12Q9H081 205 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 BATF3Q9NR55 127 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 DDX43Q9NXZ2 648 aaKnown RBP8.51□□□□□ -1.05
CCDC39-201ENST00000442201 WDR35Q9P2L0 1181 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 TRIP11Q15643 1979 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 SCN1AP35498 2009 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 CTAGE15A4D2H0 777 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 KCNK3O14649 394 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms