RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 MRPS17Q9Y2R5 130 aaKnown RBP20.2■□□□□ 0.82
HMGB3P22-201ENST00000442010 PIAS3Q9Y6X2 628 aa20.2■□□□□ 0.82
HMGB3P22-201ENST00000442010 DPYSL4O14531 572 aa20.19■□□□□ 0.82
HMGB3P22-201ENST00000442010 IKBKBO14920 756 aa20.19■□□□□ 0.82
HMGB3P22-201ENST00000442010 AKAP3O75969 853 aa20.19■□□□□ 0.82
HMGB3P22-201ENST00000442010 PTPN1P18031 435 aaKnown RBP20.19■□□□□ 0.82
HMGB3P22-201ENST00000442010 MDH1BQ5I0G3 518 aa20.19■□□□□ 0.82
HMGB3P22-201ENST00000442010 CEP135Q66GS9 1140 aa20.19■□□□□ 0.82
HMGB3P22-201ENST00000442010 SV2AQ7L0J3 742 aa20.19■□□□□ 0.82
HMGB3P22-201ENST00000442010 SCN4BQ8IWT1 228 aa20.19■□□□□ 0.82
HMGB3P22-201ENST00000442010 CELF5Q8N6W0 485 aaKnown RBP20.19■□□□□ 0.82
HMGB3P22-201ENST00000442010 USP13Q92995 863 aaPredicted RBP20.19■□□□□ 0.82
HMGB3P22-201ENST00000442010 ELMO3Q96BJ8 720 aa20.19■□□□□ 0.82
HMGB3P22-201ENST00000442010 ZFYVE19Q96K21 471 aa20.19■□□□□ 0.82
HMGB3P22-201ENST00000442010 SMYD3Q9H7B4 428 aa20.19■□□□□ 0.82
HMGB3P22-201ENST00000442010 TMEM30AQ9NV96 361 aa20.19■□□□□ 0.82
HMGB3P22-201ENST00000442010 CCL26Q9Y258 94 aa20.19■□□□□ 0.82
HMGB3P22-201ENST00000442010 FRMD4BQ9Y2L6 1034 aa20.19■□□□□ 0.82
HMGB3P22-201ENST00000442010 NCAM2O15394 837 aa20.18■□□□□ 0.82
HMGB3P22-201ENST00000442010 GFRA3O60609 400 aa20.18■□□□□ 0.82
HMGB3P22-201ENST00000442010 SP9P0CG40 484 aa20.18■□□□□ 0.82
HMGB3P22-201ENST00000442010 NR2F2P24468 414 aa20.18■□□□□ 0.82
HMGB3P22-201ENST00000442010 CDH8P55286 799 aa20.18■□□□□ 0.82
HMGB3P22-201ENST00000442010 CYP27A1Q02318 531 aa20.18■□□□□ 0.82
HMGB3P22-201ENST00000442010 PNOCQ13519 176 aa20.18■□□□□ 0.82
HMGB3P22-201ENST00000442010 ZNF699Q32M78 642 aa20.18■□□□□ 0.82
HMGB3P22-201ENST00000442010 ZNF667Q5HYK9 610 aa20.18■□□□□ 0.82
HMGB3P22-201ENST00000442010 ASCL5Q7RTU5 278 aa20.18■□□□□ 0.82
HMGB3P22-201ENST00000442010 RIN3Q8TB24 985 aa20.18■□□□□ 0.82
HMGB3P22-201ENST00000442010 FAM3CQ92520 227 aa20.18■□□□□ 0.82
HMGB3P22-201ENST00000442010 MRPS31Q92665 395 aaKnown RBP20.18■□□□□ 0.82
HMGB3P22-201ENST00000442010 SDCBP2Q9H190 292 aa20.18■□□□□ 0.82
HMGB3P22-201ENST00000442010 GTSE1Q9NYZ3 720 aa20.18■□□□□ 0.82
HMGB3P22-201ENST00000442010 ATG2BQ96BY7 2078 aa20.17■□□□□ 0.82
HMGB3P22-201ENST00000442010 PRR23AA6NEV1 266 aa20.17■□□□□ 0.82
HMGB3P22-201ENST00000442010 A8MXQ7 604 aa20.17■□□□□ 0.82
HMGB3P22-201ENST00000442010 AVPR1AP37288 418 aa20.17■□□□□ 0.82
HMGB3P22-201ENST00000442010 GRIK1P39086 918 aa20.17■□□□□ 0.82
HMGB3P22-201ENST00000442010 CACNA2D1P54289 1103 aa20.17■□□□□ 0.82
HMGB3P22-201ENST00000442010 USP46P62068 366 aa20.17■□□□□ 0.82
HMGB3P22-201ENST00000442010 PLCB2Q00722 1185 aa20.17■□□□□ 0.82
HMGB3P22-201ENST00000442010 ENPEPQ07075 957 aa20.17■□□□□ 0.82
HMGB3P22-201ENST00000442010 ZNF268Q14587 947 aaPredicted RBP20.17■□□□□ 0.82
HMGB3P22-201ENST00000442010 WDR44Q5JSH3 913 aa20.17■□□□□ 0.82
HMGB3P22-201ENST00000442010 B3GALNT2Q8NCR0 500 aa20.17■□□□□ 0.82
HMGB3P22-201ENST00000442010 SPATA20Q8TB22 786 aa20.17■□□□□ 0.82
HMGB3P22-201ENST00000442010 CSGALNACT1Q8TDX6 532 aa20.17■□□□□ 0.82
HMGB3P22-201ENST00000442010 MSANTD3Q96H12 275 aa20.17■□□□□ 0.82
HMGB3P22-201ENST00000442010 C8orf48Q96LL4 319 aa20.17■□□□□ 0.82
HMGB3P22-201ENST00000442010 SLC22A12Q96S37 553 aa20.17■□□□□ 0.82
HMGB3P22-201ENST00000442010 FAM83CQ9BQN1 747 aa20.17■□□□□ 0.82
HMGB3P22-201ENST00000442010 TTLL2Q9BWV7 592 aa20.17■□□□□ 0.82
HMGB3P22-201ENST00000442010 B3GNT5Q9BYG0 378 aa20.17■□□□□ 0.82
HMGB3P22-201ENST00000442010 C8orf33Q9H7E9 229 aaPredicted RBP20.17■□□□□ 0.82
HMGB3P22-201ENST00000442010 TDP1Q9NUW8 608 aa20.17■□□□□ 0.82
HMGB3P22-201ENST00000442010 GCNT4Q9P109 453 aa20.17■□□□□ 0.82
HMGB3P22-201ENST00000442010 NDRG2Q9UN36 371 aaKnown RBP20.17■□□□□ 0.82
HMGB3P22-201ENST00000442010 TRIM66O15016 1216 aa20.16■□□□□ 0.82
HMGB3P22-201ENST00000442010 ASS1P00966 412 aaKnown RBP20.16■□□□□ 0.82
HMGB3P22-201ENST00000442010 CHRNB1P11230 501 aa20.16■□□□□ 0.82
HMGB3P22-201ENST00000442010 CCNE1P24864 410 aa20.16■□□□□ 0.82
HMGB3P22-201ENST00000442010 RAP1GAPP47736 663 aa20.16■□□□□ 0.82
HMGB3P22-201ENST00000442010 SOX9P48436 509 aa20.16■□□□□ 0.82
HMGB3P22-201ENST00000442010 VAMP7P51809 220 aa20.16■□□□□ 0.82
HMGB3P22-201ENST00000442010 SGSM1Q2NKQ1 1148 aa20.16■□□□□ 0.82
HMGB3P22-201ENST00000442010 DENND5BQ6ZUT9 1274 aa20.16■□□□□ 0.82
HMGB3P22-201ENST00000442010 INTS8Q75QN2 995 aaKnown RBP20.16■□□□□ 0.82
HMGB3P22-201ENST00000442010 SMYD4Q8IYR2 804 aaPredicted RBP20.16■□□□□ 0.82
HMGB3P22-201ENST00000442010 NKD2Q969F2 451 aaPredicted RBP20.16■□□□□ 0.82
HMGB3P22-201ENST00000442010 ZNF518BQ9C0D4 1074 aa20.16■□□□□ 0.82
HMGB3P22-201ENST00000442010 CHRDQ9H2X0 955 aa20.16■□□□□ 0.82
HMGB3P22-201ENST00000442010 KIF9Q9HAQ2 790 aa20.16■□□□□ 0.82
HMGB3P22-201ENST00000442010 SPATA6Q9NWH7 488 aaPredicted RBP20.16■□□□□ 0.82
HMGB3P22-201ENST00000442010 FBXO4Q9UKT5 387 aa20.16■□□□□ 0.82
HMGB3P22-201ENST00000442010 F8VP50 259 aa20.15■□□□□ 0.82
HMGB3P22-201ENST00000442010 SPECC1L-ADORA2AF8WAN1 911 aa20.15■□□□□ 0.82
HMGB3P22-201ENST00000442010 CTHP32929 405 aa20.15■□□□□ 0.82
HMGB3P22-201ENST00000442010 NOP14P78316 857 aaKnown RBP20.15■□□□□ 0.82
HMGB3P22-201ENST00000442010 FAM160A1Q05DH4 1040 aa20.15■□□□□ 0.82
HMGB3P22-201ENST00000442010 TNK2Q07912 1038 aa20.15■□□□□ 0.82
HMGB3P22-201ENST00000442010 PPP3CAQ08209 521 aa20.15■□□□□ 0.82
HMGB3P22-201ENST00000442010 ADAM9Q13443 819 aa20.15■□□□□ 0.82
HMGB3P22-201ENST00000442010 EDRF1Q3B7T1 1238 aa20.15■□□□□ 0.82
HMGB3P22-201ENST00000442010 ZNF528Q3MIS6 628 aa20.15■□□□□ 0.82
HMGB3P22-201ENST00000442010 COBLL1Q53SF7 1204 aa20.15■□□□□ 0.82
HMGB3P22-201ENST00000442010 C1orf228Q6PIY5 440 aa20.15■□□□□ 0.82
HMGB3P22-201ENST00000442010 TXNDC11Q6PKC3 985 aa20.15■□□□□ 0.82
HMGB3P22-201ENST00000442010 MAMSTRQ6ZN01 415 aa20.15■□□□□ 0.82
HMGB3P22-201ENST00000442010 PAQR9Q6ZVX9 377 aa20.15■□□□□ 0.82
HMGB3P22-201ENST00000442010 TAF4BQ92750 862 aa20.15■□□□□ 0.82
HMGB3P22-201ENST00000442010 CCDC34Q96HJ3 373 aa20.15■□□□□ 0.82
HMGB3P22-201ENST00000442010 TIGD1Q96MW7 591 aa20.15■□□□□ 0.82
HMGB3P22-201ENST00000442010 ELOVL4Q9GZR5 314 aa20.15■□□□□ 0.82
HMGB3P22-201ENST00000442010 HPS4Q9NQG7 708 aa20.15■□□□□ 0.82
HMGB3P22-201ENST00000442010 OTOGLQ3ZCN5 2332 aa20.14■□□□□ 0.82
HMGB3P22-201ENST00000442010 CLDN5O00501 218 aa20.14■□□□□ 0.81
HMGB3P22-201ENST00000442010 HLA-DRAP01903 254 aa20.14■□□□□ 0.81
HMGB3P22-201ENST00000442010 TRIM49P0CI25 452 aa20.14■□□□□ 0.81
HMGB3P22-201ENST00000442010 TRIM49CP0CI26 452 aa20.14■□□□□ 0.81
HMGB3P22-201ENST00000442010 RPL13P26373 211 aaKnown RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms