RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 CAMTA2O94983 1202 aa7.87□□□□□ -1.15
HDAC9-214ENST00000441542 KRT1P04264 644 aa7.87□□□□□ -1.15
HDAC9-214ENST00000441542 SRGAP2CP0DJJ0 459 aa7.87□□□□□ -1.15
HDAC9-214ENST00000441542 SRGAP2BP0DMP2 458 aa7.87□□□□□ -1.15
HDAC9-214ENST00000441542 RPL10P27635 214 aaKnown RBP7.87□□□□□ -1.15
HDAC9-214ENST00000441542 MTTPP55157 894 aa7.87□□□□□ -1.15
HDAC9-214ENST00000441542 GEMIN4P57678 1058 aaKnown RBP7.87□□□□□ -1.15
HDAC9-214ENST00000441542 ACTR3P61158 418 aa7.87□□□□□ -1.15
HDAC9-214ENST00000441542 MAP3K10Q02779 954 aa7.87□□□□□ -1.15
HDAC9-214ENST00000441542 BST1Q10588 318 aa7.87□□□□□ -1.15
HDAC9-214ENST00000441542 TMEM259Q4ZIN3 620 aa7.87□□□□□ -1.15
HDAC9-214ENST00000441542 ANKRD22Q5VYY1 191 aa7.87□□□□□ -1.15
HDAC9-214ENST00000441542 ZNF772Q68DY9 489 aaPredicted RBP7.87□□□□□ -1.15
HDAC9-214ENST00000441542 CENPUQ71F23 418 aa7.87□□□□□ -1.15
HDAC9-214ENST00000441542 DEFB107AQ8IZN7 70 aa7.87□□□□□ -1.15
HDAC9-214ENST00000441542 FBXO36Q8NEA4 188 aa7.87□□□□□ -1.15
HDAC9-214ENST00000441542 ETNPPLQ8TBG4 499 aa7.87□□□□□ -1.15
HDAC9-214ENST00000441542 GAB3Q8WWW8 586 aa7.87□□□□□ -1.15
HDAC9-214ENST00000441542 SKA1Q96BD8 255 aa7.87□□□□□ -1.15
HDAC9-214ENST00000441542 SERAC1Q96JX3 654 aa7.87□□□□□ -1.15
HDAC9-214ENST00000441542 TRIM56Q9BRZ2 755 aaKnown RBP7.87□□□□□ -1.15
HDAC9-214ENST00000441542 ANO3Q9BYT9 981 aa7.87□□□□□ -1.15
HDAC9-214ENST00000441542 JMJD4Q9H9V9 463 aa7.87□□□□□ -1.15
HDAC9-214ENST00000441542 TUBGCP4Q9UGJ1 667 aa7.87□□□□□ -1.15
HDAC9-214ENST00000441542 TMA7Q9Y2S6 64 aaKnown RBP7.87□□□□□ -1.15
HDAC9-214ENST00000441542 NOP56O00567 594 aaKnown RBP7.86□□□□□ -1.15
HDAC9-214ENST00000441542 SPTLC1O15269 473 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 PRPF4O43172 522 aaKnown RBP eCLIP7.86□□□□□ -1.15
HDAC9-214ENST00000441542 NDUFB5O43674 189 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 SLIT3O75094 1523 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 TM7SF2O76062 418 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 MAP3K6O95382 1288 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 TFAP2AP05549 437 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 INHBAP08476 426 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 COL6A2P12110 1019 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 GLRA2P23416 452 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 CRABP2P29373 138 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 BTDP43251 543 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 GJA8P48165 433 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 MXI1P50539 228 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 FMO1Q01740 532 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 PTK7Q13308 1070 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 LPIN1Q14693 890 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 HIF1AQ16665 826 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 ANKRD20A4Q4UJ75 823 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 MSS51Q4VC12 460 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 ANO5Q75V66 913 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 LRRC43Q8N309 656 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 C17orf50Q8WW18 174 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 NCSTNQ92542 709 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 TUBB6Q9BUF5 446 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 ANKRD2Q9GZV1 360 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 CAAP1Q9H8G2 361 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 PTTG2Q9NZH5 202 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 IL1RAPL1Q9NZN1 696 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 TAGLN3Q9UI15 199 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 BARX2Q9UMQ3 279 aaPredicted RBP7.86□□□□□ -1.15
HDAC9-214ENST00000441542 CASZ1Q86V15 1759 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 COPEO14579 308 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 BUD23O43709 281 aaKnown RBP7.86□□□□□ -1.15
HDAC9-214ENST00000441542 HNRNPCL1O60812 293 aaKnown RBP7.86□□□□□ -1.15
HDAC9-214ENST00000441542 DLDP09622 509 aaKnown RBP7.86□□□□□ -1.15
HDAC9-214ENST00000441542 FGFR3P22607 806 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 SLC5A2P31639 672 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 RPL5P46777 297 aaKnown RBP7.86□□□□□ -1.15
HDAC9-214ENST00000441542 KPNA1P52294 538 aaPredicted RBP7.86□□□□□ -1.15
HDAC9-214ENST00000441542 MRPS22P82650 360 aaKnown RBP7.86□□□□□ -1.15
HDAC9-214ENST00000441542 KRT81Q14533 505 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 NRF1Q16656 503 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 ZNF568Q3ZCX4 644 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 ZNF394Q53GI3 561 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 FAXCQ5TGI0 409 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 NET1Q7Z628 596 aaPredicted RBP7.86□□□□□ -1.15
HDAC9-214ENST00000441542 PATL1Q86TB9 770 aaKnown RBP7.86□□□□□ -1.15
HDAC9-214ENST00000441542 ZCCHC9Q8N567 271 aaKnown RBP7.86□□□□□ -1.15
HDAC9-214ENST00000441542 FAM172AQ8WUF8 416 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 CD101Q93033 1021 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 CYLDQ9NQC7 956 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 UBAP1Q9NZ09 502 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 SMIM31A0A1B0GVY4 71 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 TMX2-CTNND1H3BSU7 103 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 TRMUO75648 421 aaKnown RBP7.86□□□□□ -1.15
HDAC9-214ENST00000441542 SPATA31C1P0DKV0 1188 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 FDX1P10109 184 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 ZNF24P17028 368 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 ANXA13P27216 316 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 CDH15P55291 814 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 GPX6P59796 221 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 PRAMEP78395 509 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 CAV1Q03135 178 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 SMTNL2Q2TAL5 461 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 FNBP1LQ5T0N5 605 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 VWA5B1Q5TIE3 1220 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 TBC1D9BQ66K14 1250 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 CDHR3Q6ZTQ4 885 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 TMC7Q7Z402 723 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 ZNF34Q8IZ26 560 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 HS6ST3Q8IZP7 471 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 GRIN3AQ8TCU5 1115 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 KREMEN1Q96MU8 473 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms