RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 CENPTQ96BT3 561 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 TUBGCP5Q96RT8 1024 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 TMEM120AQ9BXJ8 343 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 ETNK2Q9NVF9 386 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 PCDHB2Q9Y5E7 798 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 LAMB1P07942 1786 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 AVILO75366 819 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 CIB2O75838 187 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 DGKIO75912 1065 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 SAT1P21673 171 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 CLCN3P51790 818 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 NR1H3Q13133 447 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 RIPK1Q13546 671 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 PPP2R5EQ16537 467 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 GPAT2Q6NUI2 795 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 IYDQ6PHW0 289 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 C3orf62Q6ZUJ4 267 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 MAP4K3Q8IVH8 894 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 RIBC1Q8N443 379 aaPredicted RBP10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 GALNT4Q8N4A0 578 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 C7orf31Q8N865 590 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 UBA3Q8TBC4 463 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 MAGEC3Q8TD91 643 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.41□□□□□ -0.747e-9■■■■■ 72.6
CDC42SE1-202ENST00000439374 SERPINB12Q96P63 405 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 TSSK1BQ9BXA7 367 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 TRIM55Q9BYV6 548 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 ELP3Q9H9T3 547 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 PTPRJQ12913 1337 aa10.4□□□□□ -0.74
CDC42SE1-202ENST00000439374 CYB561D2O14569 222 aa10.4□□□□□ -0.74
CDC42SE1-202ENST00000439374 KIF3CO14782 793 aa10.4□□□□□ -0.74
CDC42SE1-202ENST00000439374 MT-ND3P03897 115 aa10.4□□□□□ -0.74
CDC42SE1-202ENST00000439374 PYGBP11216 843 aa10.4□□□□□ -0.74
CDC42SE1-202ENST00000439374 PSMA2P25787 234 aa10.4□□□□□ -0.74
CDC42SE1-202ENST00000439374 RGS7P49802 495 aa10.4□□□□□ -0.74
CDC42SE1-202ENST00000439374 CLEC16AQ2KHT3 1053 aa10.4□□□□□ -0.74
CDC42SE1-202ENST00000439374 XKR3Q5GH77 459 aa10.4□□□□□ -0.74
CDC42SE1-202ENST00000439374 RABGAP1LQ5R372 815 aa10.4□□□□□ -0.74
CDC42SE1-202ENST00000439374 C6orf163Q5TEZ5 329 aa10.4□□□□□ -0.74
CDC42SE1-202ENST00000439374 PAOXQ6QHF9 649 aa10.4□□□□□ -0.74
CDC42SE1-202ENST00000439374 POLNQ7Z5Q5 900 aa10.4□□□□□ -0.74
CDC42SE1-202ENST00000439374 FAM83AQ86UY5 434 aa10.4□□□□□ -0.74
CDC42SE1-202ENST00000439374 KBTBD2Q8IY47 623 aa10.4□□□□□ -0.74
CDC42SE1-202ENST00000439374 AGGF1Q8N302 714 aaeCLIP10.4□□□□□ -0.74
CDC42SE1-202ENST00000439374 AGBL3Q8NEM8 1001 aa10.4□□□□□ -0.74
CDC42SE1-202ENST00000439374 TRPM4Q8TD43 1214 aa10.4□□□□□ -0.74
CDC42SE1-202ENST00000439374 APPL1Q9UKG1 709 aa10.4□□□□□ -0.74
CDC42SE1-202ENST00000439374 CCDC78A2IDD5 438 aa10.4□□□□□ -0.74
CDC42SE1-202ENST00000439374 NCF2P19878 526 aaPredicted RBP10.4□□□□□ -0.74
CDC42SE1-202ENST00000439374 SLC25A3Q00325 362 aa10.4□□□□□ -0.74
CDC42SE1-202ENST00000439374 CUL2Q13617 745 aa10.4□□□□□ -0.74
CDC42SE1-202ENST00000439374 UBAP2LQ14157 1087 aaKnown RBP10.4□□□□□ -0.74
CDC42SE1-202ENST00000439374 R3HDM1Q15032 1099 aaKnown RBP10.4□□□□□ -0.74
CDC42SE1-202ENST00000439374 ZNF568Q3ZCX4 644 aa10.4□□□□□ -0.74
CDC42SE1-202ENST00000439374 FOXR2Q6PJQ5 311 aa10.4□□□□□ -0.74
CDC42SE1-202ENST00000439374 TRMT10CQ7L0Y3 403 aaKnown RBP10.4□□□□□ -0.74
CDC42SE1-202ENST00000439374 ARHGAP22Q7Z5H3 698 aa10.4□□□□□ -0.74
CDC42SE1-202ENST00000439374 GSDMBQ8TAX9 411 aa10.4□□□□□ -0.74
CDC42SE1-202ENST00000439374 SLC7A6OSQ96CW6 309 aaPredicted RBP10.4□□□□□ -0.74
CDC42SE1-202ENST00000439374 GMLQ99445 158 aa10.4□□□□□ -0.74
CDC42SE1-202ENST00000439374 NRBP2Q9NSY0 501 aa10.4□□□□□ -0.74
CDC42SE1-202ENST00000439374 ANKEF1Q9NU02 776 aa10.4□□□□□ -0.74
CDC42SE1-202ENST00000439374 POLIQ9UNA4 740 aa10.4□□□□□ -0.74
CDC42SE1-202ENST00000439374 PCDHA3Q9Y5H8 950 aa10.4□□□□□ -0.74
CDC42SE1-202ENST00000439374 IVNS1ABPQ9Y6Y0 642 aa10.4□□□□□ -0.74
CDC42SE1-202ENST00000439374 NCANO14594 1321 aa10.4□□□□□ -0.74
CDC42SE1-202ENST00000439374 BTNL10A8MVZ5 291 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 LPXNO60711 386 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 DKC1O60832 514 aaKnown RBP eCLIP10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 T-ENOLP0DO92 83 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 MAPTP10636 758 aaKnown RBP10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 PTPRAP18433 802 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 TCF7P36402 384 aaPredicted RBP10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 Q3C1V9 767 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 CASC4Q6P4E1 433 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 MFSD7Q6UXD7 560 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 PTAR1Q7Z6K3 402 aaPredicted RBP10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 CLNKQ7Z7G1 428 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 RFX6Q8HWS3 928 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 RSAD2Q8WXG1 361 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 MMP19Q99542 508 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 TRAIPQ9BWF2 469 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 NMUR2Q9GZQ4 415 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 APOBEC3GQ9HC16 384 aaKnown RBP10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 TJP2Q9UDY2 1190 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 AKT3Q9Y243 479 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 HEY1Q9Y5J3 304 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 ATRNL1Q5VV63 1379 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 STAM2O75886 525 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 GLRA2P23416 452 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 CYTH1Q15438 398 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 TRIP10Q15642 601 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 ZNF699Q32M78 642 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 EMC10Q5UCC4 262 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 TXNRD3NBQ6F5E7 133 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 SLC9A9Q8IVB4 645 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 RHOT1Q8IXI2 618 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 LRRC43Q8N309 656 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 GSTCDQ8NEC7 633 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms