RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 ANKRD20A8PQ5CZ79 823 aa12.6□□□□□ -0.39
NEK1-201ENST00000439128 ANKRD20A2Q5SQ80 823 aa12.6□□□□□ -0.39
NEK1-201ENST00000439128 ZNF697Q5TEC3 545 aa12.6□□□□□ -0.39
NEK1-201ENST00000439128 ANKRD20A1Q5TYW2 823 aa12.6□□□□□ -0.39
NEK1-201ENST00000439128 PPP2R2DQ66LE6 453 aa12.6□□□□□ -0.39
NEK1-201ENST00000439128 USP49Q70CQ1 688 aa12.6□□□□□ -0.39
NEK1-201ENST00000439128 RFWD2Q8NHY2 731 aa12.6□□□□□ -0.39
NEK1-201ENST00000439128 CALML6Q8TD86 181 aa12.6□□□□□ -0.39
NEK1-201ENST00000439128 TFB1MQ8WVM0 346 aaKnown RBP12.6□□□□□ -0.39
NEK1-201ENST00000439128 FAM163AQ96GL9 167 aaPredicted RBP12.6□□□□□ -0.39
NEK1-201ENST00000439128 PNKPQ96T60 521 aa12.6□□□□□ -0.39
NEK1-201ENST00000439128 MRIQ9BWK5 157 aa12.6□□□□□ -0.39
NEK1-201ENST00000439128 TAF6LQ9Y6J9 622 aa12.6□□□□□ -0.39
NEK1-201ENST00000439128 SPACA6W5XKT8 324 aa12.6□□□□□ -0.39
NEK1-201ENST00000439128 E2F6O75461 281 aa12.6□□□□□ -0.39
NEK1-201ENST00000439128 ARIH2O95376 493 aa12.6□□□□□ -0.39
NEK1-201ENST00000439128 GET4Q7L5D6 327 aaPredicted RBP12.6□□□□□ -0.39
NEK1-201ENST00000439128 THOC1Q96FV9 657 aaKnown RBP12.6□□□□□ -0.39
NEK1-201ENST00000439128 FAM118BQ9BPY3 351 aa12.6□□□□□ -0.39
NEK1-201ENST00000439128 A0A1W2PQC6 194 aa12.59□□□□□ -0.39
NEK1-201ENST00000439128 LACTBL1A8MY62 500 aa12.59□□□□□ -0.39
NEK1-201ENST00000439128 C5orf58C9J3I9 102 aa12.59□□□□□ -0.39
NEK1-201ENST00000439128 SLC9A3R1O14745 358 aaPredicted RBP12.59□□□□□ -0.39
NEK1-201ENST00000439128 MTSS1O43312 755 aa12.59□□□□□ -0.39
NEK1-201ENST00000439128 USP2O75604 605 aaPredicted RBP12.59□□□□□ -0.39
NEK1-201ENST00000439128 ANXA9O76027 345 aa12.59□□□□□ -0.39
NEK1-201ENST00000439128 CCDC33Q8N5R6 958 aa12.59□□□□□ -0.39
NEK1-201ENST00000439128 TMA16Q96EY4 203 aaKnown RBP12.59□□□□□ -0.39
NEK1-201ENST00000439128 Q9H521 79 aa12.59□□□□□ -0.39
NEK1-201ENST00000439128 USP20Q9Y2K6 914 aa12.59□□□□□ -0.39
NEK1-201ENST00000439128 PDZK1P1A8MUH7 402 aa12.59□□□□□ -0.39
NEK1-201ENST00000439128 KPNA3O00505 521 aaPredicted RBP12.59□□□□□ -0.39
NEK1-201ENST00000439128 RECQL4O94761 1208 aa12.59□□□□□ -0.39
NEK1-201ENST00000439128 FGFR1P11362 822 aa12.59□□□□□ -0.39
NEK1-201ENST00000439128 MTFR1Q15390 333 aa12.59□□□□□ -0.39
NEK1-201ENST00000439128 KCNA10Q16322 511 aa12.59□□□□□ -0.39
NEK1-201ENST00000439128 TTC31Q49AM3 519 aaPredicted RBP12.59□□□□□ -0.39
NEK1-201ENST00000439128 RETSATQ6NUM9 610 aa12.59□□□□□ -0.39
NEK1-201ENST00000439128 FAM161BQ96MY7 647 aa12.59□□□□□ -0.39
NEK1-201ENST00000439128 NR1H4Q96RI1 486 aaPredicted RBP12.59□□□□□ -0.39
NEK1-201ENST00000439128 COPS7BQ9H9Q2 264 aaPredicted RBP12.59□□□□□ -0.39
NEK1-201ENST00000439128 XPO7Q9UIA9 1087 aaKnown RBP12.59□□□□□ -0.39
NEK1-201ENST00000439128 HPS5Q9UPZ3 1129 aa12.59□□□□□ -0.39
NEK1-201ENST00000439128 APOBEC2Q9Y235 224 aaKnown RBP12.59□□□□□ -0.39
NEK1-201ENST00000439128 NDUFB5O43674 189 aa12.59□□□□□ -0.39
NEK1-201ENST00000439128 MGEA5O60502 916 aa12.59□□□□□ -0.39
NEK1-201ENST00000439128 ATP5BP06576 529 aaKnown RBP12.59□□□□□ -0.39
NEK1-201ENST00000439128 EIF3BP55884 814 aaKnown RBP12.59□□□□□ -0.39
NEK1-201ENST00000439128 CAMK2GQ13555 558 aaPredicted RBP12.59□□□□□ -0.39
NEK1-201ENST00000439128 ACOX1Q15067 660 aa12.59□□□□□ -0.39
NEK1-201ENST00000439128 SGO1Q5FBB7 561 aa12.59□□□□□ -0.39
NEK1-201ENST00000439128 NAPEPLDQ6IQ20 393 aa12.59□□□□□ -0.39
NEK1-201ENST00000439128 TIGD7Q6NT04 549 aaPredicted RBP12.59□□□□□ -0.39
NEK1-201ENST00000439128 RAD18Q9NS91 495 aa12.59□□□□□ -0.39
NEK1-201ENST00000439128 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.59□□□□□ -0.39
NEK1-201ENST00000439128 CHORDC1Q9UHD1 332 aaPredicted RBP12.59□□□□□ -0.39
NEK1-201ENST00000439128 A0A0G2JND7 137 aa12.59□□□□□ -0.39
NEK1-201ENST00000439128 NT5C1B-RDH14C9J2C7 533 aa12.59□□□□□ -0.39
NEK1-201ENST00000439128 DYRK3O43781 588 aa12.59□□□□□ -0.39
NEK1-201ENST00000439128 SPATA31D3P0C874 917 aa12.59□□□□□ -0.39
NEK1-201ENST00000439128 BDNFP23560 247 aa12.59□□□□□ -0.39
NEK1-201ENST00000439128 PRKCZQ05513 592 aa12.59□□□□□ -0.39
NEK1-201ENST00000439128 MORF4L2Q15014 288 aa12.59□□□□□ -0.39
NEK1-201ENST00000439128 DOK6Q6PKX4 331 aa12.59□□□□□ -0.39
NEK1-201ENST00000439128 SPATA31D4Q6ZUB0 917 aa12.59□□□□□ -0.39
NEK1-201ENST00000439128 GBP7Q8N8V2 638 aaPredicted RBP12.59□□□□□ -0.39
NEK1-201ENST00000439128 DMAP1Q9NPF5 467 aaPredicted RBP12.59□□□□□ -0.39
NEK1-201ENST00000439128 MEI4A8MW99 385 aa12.58□□□□□ -0.39
NEK1-201ENST00000439128 SYN1P17600 705 aa12.58□□□□□ -0.39
NEK1-201ENST00000439128 SCNN1BP51168 640 aa12.58□□□□□ -0.39
NEK1-201ENST00000439128 GEMP55040 296 aa12.58□□□□□ -0.39
NEK1-201ENST00000439128 PRMT2P55345 433 aa12.58□□□□□ -0.39
NEK1-201ENST00000439128 GEMIN4P57678 1058 aaKnown RBP12.58□□□□□ -0.39
NEK1-201ENST00000439128 GIT2Q14161 759 aa12.58□□□□□ -0.39
NEK1-201ENST00000439128 SPARCL1Q14515 664 aa12.58□□□□□ -0.39
NEK1-201ENST00000439128 CCDC85BQ15834 202 aaPredicted RBP12.58□□□□□ -0.39
NEK1-201ENST00000439128 TTLL9Q3SXZ7 439 aa12.58□□□□□ -0.39
NEK1-201ENST00000439128 MYRIPQ8NFW9 859 aa12.58□□□□□ -0.39
NEK1-201ENST00000439128 OTUB1Q96FW1 271 aaPredicted RBP12.58□□□□□ -0.39
NEK1-201ENST00000439128 UROC1Q96N76 676 aa12.58□□□□□ -0.39
NEK1-201ENST00000439128 BPIFA3Q9BQP9 254 aa12.58□□□□□ -0.39
NEK1-201ENST00000439128 ELOVL4Q9GZR5 314 aa12.58□□□□□ -0.39
NEK1-201ENST00000439128 UPF3AQ9H1J1 476 aaKnown RBP12.58□□□□□ -0.39
NEK1-201ENST00000439128 AASDHPPTQ9NRN7 309 aa12.58□□□□□ -0.39
NEK1-201ENST00000439128 NDOR1Q9UHB4 597 aa12.58□□□□□ -0.39
NEK1-201ENST00000439128 DDX20Q9UHI6 824 aaKnown RBP12.58□□□□□ -0.39
NEK1-201ENST00000439128 TCRBV5S4A2TA0A5A2 114 aa12.58□□□□□ -0.4
NEK1-201ENST00000439128 ACKR2O00590 384 aa12.58□□□□□ -0.4
NEK1-201ENST00000439128 CST8O60676 142 aa12.58□□□□□ -0.4
NEK1-201ENST00000439128 SELPP16109 830 aa12.58□□□□□ -0.4
NEK1-201ENST00000439128 PTGER2P43116 358 aa12.58□□□□□ -0.4
NEK1-201ENST00000439128 THOP1P52888 689 aa12.58□□□□□ -0.4
NEK1-201ENST00000439128 CYP24A1Q07973 514 aa12.58□□□□□ -0.4
NEK1-201ENST00000439128 UGP2Q16851 508 aa12.58□□□□□ -0.4
NEK1-201ENST00000439128 LGI2Q8N0V4 545 aa12.58□□□□□ -0.4
NEK1-201ENST00000439128 CCDC197Q8NCU1 140 aa12.58□□□□□ -0.4
NEK1-201ENST00000439128 ATL2Q8NHH9 583 aa12.58□□□□□ -0.4
NEK1-201ENST00000439128 TRAIPQ9BWF2 469 aa12.58□□□□□ -0.4
NEK1-201ENST00000439128 OLFML3Q9NRN5 406 aa12.58□□□□□ -0.4
NEK1-201ENST00000439128 ST3GAL5Q9UNP4 418 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms