RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.57■□□□□ 0.087e-6■■□□□ 13.7
TSC2-206ENST00000439117 CCDC78A2IDD5 438 aa15.57■□□□□ 0.08
TSC2-206ENST00000439117 ZSCAN9O15535 394 aaPredicted RBP15.57■□□□□ 0.08
TSC2-206ENST00000439117 TRAPPC3O43617 180 aa15.57■□□□□ 0.08
TSC2-206ENST00000439117 HBP1O60381 514 aa15.57■□□□□ 0.08
TSC2-206ENST00000439117 GTF2A2P52657 109 aa15.57■□□□□ 0.08
TSC2-206ENST00000439117 DMPKQ09013 629 aa15.57■□□□□ 0.08
TSC2-206ENST00000439117 WDR72Q3MJ13 1102 aa15.57■□□□□ 0.08
TSC2-206ENST00000439117 NBPF12Q5TAG4 269 aaPredicted RBP15.57■□□□□ 0.08
TSC2-206ENST00000439117 MOXD1Q6UVY6 613 aa15.57■□□□□ 0.08
TSC2-206ENST00000439117 ZNF184Q99676 751 aaPredicted RBP15.57■□□□□ 0.08
TSC2-206ENST00000439117 NUDT12Q9BQG2 462 aa15.57■□□□□ 0.08
TSC2-206ENST00000439117 RNPEPL1Q9HAU8 725 aa15.57■□□□□ 0.08
TSC2-206ENST00000439117 MAP3K20Q9NYL2 800 aaKnown RBP15.57■□□□□ 0.08
TSC2-206ENST00000439117 PPP2R3BQ9Y5P8 575 aa15.57■□□□□ 0.08
TSC2-206ENST00000439117 OCM2P0CE71 109 aa15.57■□□□□ 0.08
TSC2-206ENST00000439117 OCMP0CE72 109 aaPredicted RBP15.57■□□□□ 0.08
TSC2-206ENST00000439117 ALDH5A1P51649 535 aaPredicted RBP15.57■□□□□ 0.08
TSC2-206ENST00000439117 TBL3Q12788 808 aaKnown RBP15.57■□□□□ 0.08
TSC2-206ENST00000439117 AENQ8WTP8 325 aaKnown RBP15.57■□□□□ 0.08
TSC2-206ENST00000439117 WDR35Q9P2L0 1181 aa15.57■□□□□ 0.08
TSC2-206ENST00000439117 F8VZ95 297 aa15.57■□□□□ 0.08
TSC2-206ENST00000439117 SLC37A4O43826 429 aa15.57■□□□□ 0.08
TSC2-206ENST00000439117 EPHX2P34913 555 aa15.57■□□□□ 0.08
TSC2-206ENST00000439117 SESN2P58004 480 aaPredicted RBP15.57■□□□□ 0.08
TSC2-206ENST00000439117 SNRNP35Q16560 246 aaKnown RBP15.57■□□□□ 0.08
TSC2-206ENST00000439117 BNC2Q6ZN30 1099 aaPredicted RBP15.57■□□□□ 0.08
TSC2-206ENST00000439117 GPBP1L1Q9HC44 474 aaPredicted RBP15.57■□□□□ 0.08
TSC2-206ENST00000439117 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.57■□□□□ 0.08
TSC2-206ENST00000439117 TFR2Q9UP52 801 aa15.57■□□□□ 0.08
TSC2-206ENST00000439117 KCNN4O15554 427 aa15.56■□□□□ 0.08
TSC2-206ENST00000439117 OTUD4Q01804 1114 aaKnown RBP15.56■□□□□ 0.08
TSC2-206ENST00000439117 RASA2Q15283 850 aa15.56■□□□□ 0.08
TSC2-206ENST00000439117 C1orf228Q6PIY5 440 aa15.56■□□□□ 0.08
TSC2-206ENST00000439117 PID1Q7Z2X4 250 aa15.56■□□□□ 0.08
TSC2-206ENST00000439117 RNF135Q8IUD6 432 aa15.56■□□□□ 0.08
TSC2-206ENST00000439117 PPIL6Q8IXY8 311 aa15.56■□□□□ 0.08
TSC2-206ENST00000439117 PPP1R36Q96LQ0 422 aa15.56■□□□□ 0.08
TSC2-206ENST00000439117 EIF3DO15371 548 aaKnown RBP eCLIP15.56■□□□□ 0.08
TSC2-206ENST00000439117 EFCAB14O75071 495 aa15.56■□□□□ 0.08
TSC2-206ENST00000439117 BCL10O95999 233 aa15.56■□□□□ 0.08
TSC2-206ENST00000439117 NPEPPSP55786 919 aa15.56■□□□□ 0.08
TSC2-206ENST00000439117 LAMC2Q13753 1193 aa15.56■□□□□ 0.08
TSC2-206ENST00000439117 PIGHQ14442 188 aaPredicted RBP15.56■□□□□ 0.08
TSC2-206ENST00000439117 KRT72Q14CN4 511 aa15.56■□□□□ 0.08
TSC2-206ENST00000439117 C6orf10Q5SRN2 563 aa15.56■□□□□ 0.08
TSC2-206ENST00000439117 FBXO25Q8TCJ0 367 aa15.56■□□□□ 0.08
TSC2-206ENST00000439117 FAM163AQ96GL9 167 aaPredicted RBP15.56■□□□□ 0.08
TSC2-206ENST00000439117 FAM111AQ96PZ2 611 aa15.56■□□□□ 0.08
TSC2-206ENST00000439117 LACRTQ9GZZ8 138 aa15.56■□□□□ 0.08
TSC2-206ENST00000439117 DAPK2Q9UIK4 370 aa15.56■□□□□ 0.08
TSC2-206ENST00000439117 NAGPAQ9UK23 515 aa15.56■□□□□ 0.08
TSC2-206ENST00000439117 KIF1AQ12756 1690 aa15.56■□□□□ 0.08
TSC2-206ENST00000439117 TRPC5OSA6NMA1 111 aa15.56■□□□□ 0.08
TSC2-206ENST00000439117 C4orf22Q6V702 233 aa15.56■□□□□ 0.08
TSC2-206ENST00000439117 BTBD10Q9BSF8 475 aa15.56■□□□□ 0.08
TSC2-206ENST00000439117 NEUROG2Q9H2A3 272 aa15.56■□□□□ 0.08
TSC2-206ENST00000439117 TUBA8Q9NY65 449 aaPredicted RBP15.56■□□□□ 0.08
TSC2-206ENST00000439117 ADGRB2O60241 1585 aa15.56■□□□□ 0.08
TSC2-206ENST00000439117 TRIM49D1C9J1S8 452 aa15.56■□□□□ 0.08
TSC2-206ENST00000439117 ASNA1O43681 348 aa15.56■□□□□ 0.08
TSC2-206ENST00000439117 GLI1P08151 1106 aa15.56■□□□□ 0.08
TSC2-206ENST00000439117 ZC2HC1CQ53FD0 456 aaPredicted RBP15.56■□□□□ 0.08
TSC2-206ENST00000439117 FAM102AQ5T9C2 384 aaPredicted RBP15.56■□□□□ 0.08
TSC2-206ENST00000439117 IER5Q5VY09 327 aa15.56■□□□□ 0.08
TSC2-206ENST00000439117 SAMD3Q8N6K7 520 aa15.56■□□□□ 0.08
TSC2-206ENST00000439117 TNIP3Q96KP6 325 aa15.56■□□□□ 0.08
TSC2-206ENST00000439117 NR1H4Q96RI1 486 aaPredicted RBP15.56■□□□□ 0.08
TSC2-206ENST00000439117 MMADHCQ9H3L0 296 aaPredicted RBP15.56■□□□□ 0.08
TSC2-206ENST00000439117 RAD21L1Q9H4I0 556 aa15.56■□□□□ 0.08
TSC2-206ENST00000439117 COPG2Q9UBF2 871 aa15.56■□□□□ 0.08
TSC2-206ENST00000439117 PCDHGB4Q9UN71 923 aa15.56■□□□□ 0.08
TSC2-206ENST00000439117 POLIQ9UNA4 740 aa15.56■□□□□ 0.08
TSC2-206ENST00000439117 GSTT1P30711 240 aa15.55■□□□□ 0.08
TSC2-206ENST00000439117 C21orf59P57076 290 aa15.55■□□□□ 0.08
TSC2-206ENST00000439117 SREBF2Q12772 1141 aa15.55■□□□□ 0.08
TSC2-206ENST00000439117 PTPAQ15257 358 aa15.55■□□□□ 0.08
TSC2-206ENST00000439117 PLEKHM3Q6ZWE6 761 aa15.55■□□□□ 0.08
TSC2-206ENST00000439117 CCDC60Q8IWA6 550 aaPredicted RBP15.55■□□□□ 0.08
TSC2-206ENST00000439117 ZCCHC7Q8N3Z6 543 aaKnown RBP15.55■□□□□ 0.08
TSC2-206ENST00000439117 DDX18Q9NVP1 670 aaKnown RBP15.55■□□□□ 0.08
TSC2-206ENST00000439117 AGAP1Q9UPQ3 857 aa15.55■□□□□ 0.08
TSC2-206ENST00000439117 COMMD3-BMI1R4GMX3 469 aa15.55■□□□□ 0.08
TSC2-206ENST00000439117 ADORA2BP29275 332 aa15.55■□□□□ 0.08
TSC2-206ENST00000439117 RBP5P82980 135 aa15.55■□□□□ 0.08
TSC2-206ENST00000439117 LBRQ14739 615 aaKnown RBP15.55■□□□□ 0.08
TSC2-206ENST00000439117 B3GNT6Q6ZMB0 384 aa15.55■□□□□ 0.08
TSC2-206ENST00000439117 TSPAN17Q96FV3 270 aa15.55■□□□□ 0.08
TSC2-206ENST00000439117 ZSWIM1Q9BR11 485 aa15.55■□□□□ 0.08
TSC2-206ENST00000439117 DHX35Q9H5Z1 703 aaKnown RBP15.55■□□□□ 0.08
TSC2-206ENST00000439117 TRIM45Q9H8W5 580 aaPredicted RBP15.55■□□□□ 0.08
TSC2-206ENST00000439117 ZNF556Q9HAH1 456 aa15.55■□□□□ 0.08
TSC2-206ENST00000439117 SAR1AQ9NR31 198 aa15.55■□□□□ 0.08
TSC2-206ENST00000439117 MYO1DO94832 1006 aa15.55■□□□□ 0.08
TSC2-206ENST00000439117 APOA4P06727 396 aa15.55■□□□□ 0.08
TSC2-206ENST00000439117 SHMT1P34896 483 aa15.55■□□□□ 0.08
TSC2-206ENST00000439117 SREBF1P36956 1147 aa15.55■□□□□ 0.08
TSC2-206ENST00000439117 KLHDC7AQ5VTJ3 777 aa15.55■□□□□ 0.08
TSC2-206ENST00000439117 LRRN4CLQ8ND94 238 aa15.55■□□□□ 0.08
TSC2-206ENST00000439117 OR6P1Q8NGX9 317 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms