RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 NUP210Q8TEM1 1887 aaPredicted RBP17.96■□□□□ 0.47
TARDBP-203ENST00000439080 ANAPC1Q9H1A4 1944 aa17.95■□□□□ 0.46
TARDBP-203ENST00000439080 RHOP08100 348 aa17.95■□□□□ 0.46
TARDBP-203ENST00000439080 KRT5P13647 590 aa17.95■□□□□ 0.46
TARDBP-203ENST00000439080 PTPN2P17706 415 aa17.95■□□□□ 0.46
TARDBP-203ENST00000439080 SP100P23497 879 aaPredicted RBP17.95■□□□□ 0.46
TARDBP-203ENST00000439080 ADORA2BP29275 332 aa17.95■□□□□ 0.46
TARDBP-203ENST00000439080 GRIK1P39086 918 aa17.95■□□□□ 0.46
TARDBP-203ENST00000439080 KLK7P49862 253 aa17.95■□□□□ 0.46
TARDBP-203ENST00000439080 ZNF132P52740 706 aa17.95■□□□□ 0.46
TARDBP-203ENST00000439080 MFAP3P55082 362 aa17.95■□□□□ 0.46
TARDBP-203ENST00000439080 UBXN1Q04323 297 aa17.95■□□□□ 0.46
TARDBP-203ENST00000439080 ARHGAP44Q17R89 818 aa17.95■□□□□ 0.46
TARDBP-203ENST00000439080 DPY19L2P1Q6NXN4 242 aa17.95■□□□□ 0.46
TARDBP-203ENST00000439080 PAQR9Q6ZVX9 377 aa17.95■□□□□ 0.46
TARDBP-203ENST00000439080 RBBP8NLQ8NC74 664 aaPredicted RBP17.95■□□□□ 0.46
TARDBP-203ENST00000439080 JAKMIP2Q96AA8 810 aa17.95■□□□□ 0.46
TARDBP-203ENST00000439080 CYFIP2Q96F07 1278 aa17.95■□□□□ 0.46
TARDBP-203ENST00000439080 HEXIM2Q96MH2 286 aaKnown RBP17.95■□□□□ 0.46
TARDBP-203ENST00000439080 PHF7Q9BWX1 381 aaPredicted RBP17.95■□□□□ 0.46
TARDBP-203ENST00000439080 ASB3Q9Y575 518 aa17.95■□□□□ 0.46
TARDBP-203ENST00000439080 FHOD1Q9Y613 1164 aa17.95■□□□□ 0.46
TARDBP-203ENST00000439080 MUC3AQ02505 3323 aa17.95■□□□□ 0.46
TARDBP-203ENST00000439080 F8VP50 259 aa17.94■□□□□ 0.46
TARDBP-203ENST00000439080 AP1G2O75843 785 aa17.94■□□□□ 0.46
TARDBP-203ENST00000439080 RFX1P22670 979 aa17.94■□□□□ 0.46
TARDBP-203ENST00000439080 ANXA13P27216 316 aa17.94■□□□□ 0.46
TARDBP-203ENST00000439080 SYCP1Q15431 976 aa17.94■□□□□ 0.46
TARDBP-203ENST00000439080 SLC5A9Q2M3M2 681 aa17.94■□□□□ 0.46
TARDBP-203ENST00000439080 PPP1R26Q5T8A7 1209 aaPredicted RBP17.94■□□□□ 0.46
TARDBP-203ENST00000439080 KLHDC7AQ5VTJ3 777 aa17.94■□□□□ 0.46
TARDBP-203ENST00000439080 PDZD4Q76G19 769 aaPredicted RBP17.94■□□□□ 0.46
TARDBP-203ENST00000439080 TMC8Q8IU68 726 aa17.94■□□□□ 0.46
TARDBP-203ENST00000439080 HS6ST3Q8IZP7 471 aa17.94■□□□□ 0.46
TARDBP-203ENST00000439080 RNF214Q8ND24 703 aa17.94■□□□□ 0.46
TARDBP-203ENST00000439080 HNRNPABQ99729 332 aaKnown RBP17.94■□□□□ 0.46
TARDBP-203ENST00000439080 DMAP1Q9NPF5 467 aaPredicted RBP17.94■□□□□ 0.46
TARDBP-203ENST00000439080 PLCB1Q9NQ66 1216 aa17.94■□□□□ 0.46
TARDBP-203ENST00000439080 DNAJC12Q9UKB3 198 aa17.94■□□□□ 0.46
TARDBP-203ENST00000439080 SIK3Q9Y2K2 1263 aa17.94■□□□□ 0.46
TARDBP-203ENST00000439080 SERPINC1P01008 464 aa17.93■□□□□ 0.46
TARDBP-203ENST00000439080 PAEPP09466 180 aa17.93■□□□□ 0.46
TARDBP-203ENST00000439080 FAM200BP0CF97 657 aa17.93■□□□□ 0.46
TARDBP-203ENST00000439080 UCHL3P15374 230 aa17.93■□□□□ 0.46
TARDBP-203ENST00000439080 CD19P15391 556 aa17.93■□□□□ 0.46
TARDBP-203ENST00000439080 FSHRP23945 695 aa17.93■□□□□ 0.46
TARDBP-203ENST00000439080 EPHA5P54756 1037 aa17.93■□□□□ 0.46
TARDBP-203ENST00000439080 ZP2Q05996 745 aa17.93■□□□□ 0.46
TARDBP-203ENST00000439080 RAPGEF1Q13905 1077 aa17.93■□□□□ 0.46
TARDBP-203ENST00000439080 FILIP1LQ4L180 1135 aa17.93■□□□□ 0.46
TARDBP-203ENST00000439080 PRSS36Q5K4E3 855 aa17.93■□□□□ 0.46
TARDBP-203ENST00000439080 DNAJB7Q7Z6W7 309 aaPredicted RBP17.93■□□□□ 0.46
TARDBP-203ENST00000439080 ADHFE1Q8IWW8 467 aa17.93■□□□□ 0.46
TARDBP-203ENST00000439080 LEMD2Q8NC56 503 aa17.93■□□□□ 0.46
TARDBP-203ENST00000439080 SHC3Q92529 594 aa17.93■□□□□ 0.46
TARDBP-203ENST00000439080 C8orf48Q96LL4 319 aa17.93■□□□□ 0.46
TARDBP-203ENST00000439080 ERGIC2Q96RQ1 377 aa17.93■□□□□ 0.46
TARDBP-203ENST00000439080 GANQ9H2C0 597 aa17.93■□□□□ 0.46
TARDBP-203ENST00000439080 ZNF334Q9HCZ1 680 aaPredicted RBP17.93■□□□□ 0.46
TARDBP-203ENST00000439080 RTN4Q9NQC3 1192 aaKnown RBP17.93■□□□□ 0.46
TARDBP-203ENST00000439080 AVENQ9NQS1 362 aaPredicted RBP17.93■□□□□ 0.46
TARDBP-203ENST00000439080 FAM207AQ9NSI2 230 aaPredicted RBP17.93■□□□□ 0.46
TARDBP-203ENST00000439080 PRKAG3Q9UGI9 489 aa17.93■□□□□ 0.46
TARDBP-203ENST00000439080 CNTN6Q9UQ52 1028 aa17.93■□□□□ 0.46
TARDBP-203ENST00000439080 HELZP42694 1942 aaKnown RBP17.93■□□□□ 0.46
TARDBP-203ENST00000439080 A0A1B0GTH6 734 aa17.92■□□□□ 0.46
TARDBP-203ENST00000439080 SLC38A8A6NNN8 435 aa17.92■□□□□ 0.46
TARDBP-203ENST00000439080 RNF225M0QZC1 329 aaPredicted RBP17.92■□□□□ 0.46
TARDBP-203ENST00000439080 NOL4O94818 638 aa17.92■□□□□ 0.46
TARDBP-203ENST00000439080 CSH1P0DML2 217 aa17.92■□□□□ 0.46
TARDBP-203ENST00000439080 CSH2P0DML3 217 aa17.92■□□□□ 0.46
TARDBP-203ENST00000439080 MYL4P12829 197 aa17.92■□□□□ 0.46
TARDBP-203ENST00000439080 CCR2P41597 374 aa17.92■□□□□ 0.46
TARDBP-203ENST00000439080 MTMR3Q13615 1198 aa17.92■□□□□ 0.46
TARDBP-203ENST00000439080 TAF12Q16514 161 aa17.92■□□□□ 0.46
TARDBP-203ENST00000439080 GOLGA7BQ2TAP0 167 aa17.92■□□□□ 0.46
TARDBP-203ENST00000439080 SGO2Q562F6 1265 aa17.92■□□□□ 0.46
TARDBP-203ENST00000439080 CYP4A22Q5TCH4 519 aa17.92■□□□□ 0.46
TARDBP-203ENST00000439080 ARHGAP17Q68EM7 881 aa17.92■□□□□ 0.46
TARDBP-203ENST00000439080 TDRD5Q8NAT2 981 aaKnown RBP17.92■□□□□ 0.46
TARDBP-203ENST00000439080 ITFG1Q8TB96 612 aa17.92■□□□□ 0.46
TARDBP-203ENST00000439080 ADAMTS19Q8TE59 1207 aa17.92■□□□□ 0.46
TARDBP-203ENST00000439080 RPGRIP1Q96KN7 1286 aa17.92■□□□□ 0.46
TARDBP-203ENST00000439080 SPATA17Q96L03 361 aa17.92■□□□□ 0.46
TARDBP-203ENST00000439080 PCMTD1Q96MG8 357 aaPredicted RBP17.92■□□□□ 0.46
TARDBP-203ENST00000439080 KCNK16Q96T55 309 aa17.92■□□□□ 0.46
TARDBP-203ENST00000439080 LRRC3Q9BY71 257 aa17.92■□□□□ 0.46
TARDBP-203ENST00000439080 MAGED2Q9UNF1 606 aaPredicted RBP17.92■□□□□ 0.46
TARDBP-203ENST00000439080 MRPS23Q9Y3D9 190 aaKnown RBP17.92■□□□□ 0.46
TARDBP-203ENST00000439080 NR2E1Q9Y466 385 aa17.92■□□□□ 0.46
TARDBP-203ENST00000439080 NRG2O14511 850 aaPredicted RBP17.91■□□□□ 0.46
TARDBP-203ENST00000439080 EPHB6O15197 1021 aa17.91■□□□□ 0.46
TARDBP-203ENST00000439080 TEX33O43247 280 aa17.91■□□□□ 0.46
TARDBP-203ENST00000439080 BEST1O76090 585 aa17.91■□□□□ 0.46
TARDBP-203ENST00000439080 CALCAP01258 141 aa17.91■□□□□ 0.46
TARDBP-203ENST00000439080 PNMA6AP0CW24 399 aaPredicted RBP17.91■□□□□ 0.46
TARDBP-203ENST00000439080 VDRP11473 427 aa17.91■□□□□ 0.46
TARDBP-203ENST00000439080 HMGA1P17096 107 aaKnown RBP17.91■□□□□ 0.46
TARDBP-203ENST00000439080 NPR3P17342 541 aa17.91■□□□□ 0.46
TARDBP-203ENST00000439080 CEBPBP17676 345 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms