RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 USP46P62068 366 aa19.45■□□□□ 0.7
GTF3A-204ENST00000438571 ASIC1P78348 528 aa19.45■□□□□ 0.7
GTF3A-204ENST00000438571 ARHGAP8P85298 464 aa19.45■□□□□ 0.7
GTF3A-204ENST00000438571 FAM160A1Q05DH4 1040 aa19.45■□□□□ 0.7
GTF3A-204ENST00000438571 ZNF268Q14587 947 aaPredicted RBP19.45■□□□□ 0.7
GTF3A-204ENST00000438571 PRR23CQ6ZRP0 262 aa19.45■□□□□ 0.7
GTF3A-204ENST00000438571 SYNPOQ8N3V7 929 aa19.45■□□□□ 0.7
GTF3A-204ENST00000438571 RDH13Q8NBN7 331 aa19.45■□□□□ 0.7
GTF3A-204ENST00000438571 MRPL45Q9BRJ2 306 aaKnown RBP19.45■□□□□ 0.7
GTF3A-204ENST00000438571 GCNT4Q9P109 453 aa19.45■□□□□ 0.7
GTF3A-204ENST00000438571 UXTQ9UBK9 157 aaPredicted RBP19.45■□□□□ 0.7
GTF3A-204ENST00000438571 TNRC6BQ9UPQ9 1833 aaKnown RBP19.44■□□□□ 0.7
GTF3A-204ENST00000438571 ZNF233A6NK53 670 aa19.44■□□□□ 0.7
GTF3A-204ENST00000438571 CST3P01034 146 aaPredicted RBP19.44■□□□□ 0.7
GTF3A-204ENST00000438571 TNNC2P02585 160 aa19.44■□□□□ 0.7
GTF3A-204ENST00000438571 CKMP06732 381 aa19.44■□□□□ 0.7
GTF3A-204ENST00000438571 PDGFRBP09619 1106 aa19.44■□□□□ 0.7
GTF3A-204ENST00000438571 BDNFP23560 247 aa19.44■□□□□ 0.7
GTF3A-204ENST00000438571 PCSK1P29120 753 aa19.44■□□□□ 0.7
GTF3A-204ENST00000438571 GALK1P51570 392 aa19.44■□□□□ 0.7
GTF3A-204ENST00000438571 ZXDBP98169 803 aa19.44■□□□□ 0.7
GTF3A-204ENST00000438571 CCDC6Q16204 474 aa19.44■□□□□ 0.7
GTF3A-204ENST00000438571 FOXD4L6Q3SYB3 417 aaPredicted RBP19.44■□□□□ 0.7
GTF3A-204ENST00000438571 FOXD4L3Q6VB84 417 aaPredicted RBP19.44■□□□□ 0.7
GTF3A-204ENST00000438571 CEP68Q76N32 757 aa19.44■□□□□ 0.7
GTF3A-204ENST00000438571 NELFCDQ8IXH7 590 aa19.44■□□□□ 0.7
GTF3A-204ENST00000438571 SPATA18Q8TC71 538 aa19.44■□□□□ 0.7
GTF3A-204ENST00000438571 FUBP3Q96I24 572 aaKnown RBP eCLIP19.44■□□□□ 0.7
GTF3A-204ENST00000438571 BACH2Q9BYV9 841 aa19.44■□□□□ 0.7
GTF3A-204ENST00000438571 GZF1Q9H116 711 aaPredicted RBP19.44■□□□□ 0.7
GTF3A-204ENST00000438571 AGPAT3Q9NRZ7 376 aa19.44■□□□□ 0.7
GTF3A-204ENST00000438571 TMEM30AQ9NV96 361 aa19.44■□□□□ 0.7
GTF3A-204ENST00000438571 TRAV19A0A0A6YYK7 116 aa19.43■□□□□ 0.7
GTF3A-204ENST00000438571 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.43■□□□□ 0.7
GTF3A-204ENST00000438571 KIAA0391O15091 583 aaKnown RBP19.43■□□□□ 0.7
GTF3A-204ENST00000438571 PPP6R2O75170 966 aa19.43■□□□□ 0.7
GTF3A-204ENST00000438571 WARSP23381 471 aaKnown RBP19.43■□□□□ 0.7
GTF3A-204ENST00000438571 HOXA6P31267 233 aa19.43■□□□□ 0.7
GTF3A-204ENST00000438571 CNR2P34972 360 aa19.43■□□□□ 0.7
GTF3A-204ENST00000438571 CYP2J2P51589 502 aa19.43■□□□□ 0.7
GTF3A-204ENST00000438571 CACNA2D1P54289 1103 aa19.43■□□□□ 0.7
GTF3A-204ENST00000438571 GRSF1Q12849 480 aaKnown RBP eCLIP19.43■□□□□ 0.7
GTF3A-204ENST00000438571 MYO1EQ12965 1108 aa19.43■□□□□ 0.7
GTF3A-204ENST00000438571 EML3Q32P44 896 aa19.43■□□□□ 0.7
GTF3A-204ENST00000438571 FAM26FQ5R3K3 315 aa19.43■□□□□ 0.7
GTF3A-204ENST00000438571 CC2D1AQ6P1N0 951 aaPredicted RBP19.43■□□□□ 0.7
GTF3A-204ENST00000438571 TRAPPC11Q7Z392 1133 aa19.43■□□□□ 0.7
GTF3A-204ENST00000438571 WDR49Q8IV35 697 aa19.43■□□□□ 0.7
GTF3A-204ENST00000438571 ZNF507Q8TCN5 953 aa19.43■□□□□ 0.7
GTF3A-204ENST00000438571 HHIPQ96QV1 700 aa19.43■□□□□ 0.7
GTF3A-204ENST00000438571 RTKNQ9BST9 563 aa19.43■□□□□ 0.7
GTF3A-204ENST00000438571 BLZF1Q9H2G9 400 aa19.43■□□□□ 0.7
GTF3A-204ENST00000438571 DPEP3Q9H4B8 488 aa19.43■□□□□ 0.7
GTF3A-204ENST00000438571 ECT2Q9H8V3 914 aa19.43■□□□□ 0.7
GTF3A-204ENST00000438571 DUS2Q9NX74 493 aaKnown RBP19.43■□□□□ 0.7
GTF3A-204ENST00000438571 CDH9Q9ULB4 789 aa19.43■□□□□ 0.7
GTF3A-204ENST00000438571 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.42■□□□□ 0.7
GTF3A-204ENST00000438571 EIF3DO15371 548 aaKnown RBP eCLIP19.42■□□□□ 0.7
GTF3A-204ENST00000438571 USP17L7P0C7H9 530 aa19.42■□□□□ 0.7
GTF3A-204ENST00000438571 DLATP10515 647 aaKnown RBP19.42■□□□□ 0.7
GTF3A-204ENST00000438571 MAGEA11P43364 429 aa19.42■□□□□ 0.7
GTF3A-204ENST00000438571 CYP27A1Q02318 531 aa19.42■□□□□ 0.7
GTF3A-204ENST00000438571 EHHADHQ08426 723 aa19.42■□□□□ 0.7
GTF3A-204ENST00000438571 PDGFRLQ15198 375 aa19.42■□□□□ 0.7
GTF3A-204ENST00000438571 SNRNP35Q16560 246 aaKnown RBP19.42■□□□□ 0.7
GTF3A-204ENST00000438571 DUOXA2Q1HG44 320 aa19.42■□□□□ 0.7
GTF3A-204ENST00000438571 MDH1BQ5I0G3 518 aa19.42■□□□□ 0.7
GTF3A-204ENST00000438571 DPH6Q7L8W6 267 aa19.42■□□□□ 0.7
GTF3A-204ENST00000438571 SH3RF2Q8TEC5 729 aa19.42■□□□□ 0.7
GTF3A-204ENST00000438571 OSCP1Q8WVF1 389 aa19.42■□□□□ 0.7
GTF3A-204ENST00000438571 SCFD1Q8WVM8 642 aa19.42■□□□□ 0.7
GTF3A-204ENST00000438571 PCED1BQ96HM7 432 aa19.42■□□□□ 0.7
GTF3A-204ENST00000438571 CGRRF1Q99675 332 aa19.42■□□□□ 0.7
GTF3A-204ENST00000438571 MAGEC2Q9UBF1 373 aaPredicted RBP19.42■□□□□ 0.7
GTF3A-204ENST00000438571 CNOT1A5YKK6 2376 aaKnown RBP19.41■□□□□ 0.7
GTF3A-204ENST00000438571 SOBPA7XYQ1 873 aa19.41■□□□□ 0.7
GTF3A-204ENST00000438571 SCAMP3O14828 347 aaKnown RBP19.41■□□□□ 0.7
GTF3A-204ENST00000438571 AXIN1O15169 862 aa19.41■□□□□ 0.7
GTF3A-204ENST00000438571 CUTAO60888 179 aa19.41■□□□□ 0.7
GTF3A-204ENST00000438571 LRP3O75074 770 aa19.41■□□□□ 0.7
GTF3A-204ENST00000438571 YEATS4O95619 227 aa19.41■□□□□ 0.7
GTF3A-204ENST00000438571 IFNAR2P48551 515 aa19.41■□□□□ 0.7
GTF3A-204ENST00000438571 CYP24A1Q07973 514 aa19.41■□□□□ 0.7
GTF3A-204ENST00000438571 SURF1Q15526 300 aa19.41■□□□□ 0.7
GTF3A-204ENST00000438571 CSRP2Q16527 193 aa19.41■□□□□ 0.7
GTF3A-204ENST00000438571 C4orf50Q6ZRC1 276 aa19.41■□□□□ 0.7
GTF3A-204ENST00000438571 STXBP4Q6ZWJ1 553 aa19.41■□□□□ 0.7
GTF3A-204ENST00000438571 KBTBD6Q86V97 674 aa19.41■□□□□ 0.7
GTF3A-204ENST00000438571 CPA6Q8N4T0 437 aa19.41■□□□□ 0.7
GTF3A-204ENST00000438571 RPLP0P6Q8NHW5 317 aa19.41■□□□□ 0.7
GTF3A-204ENST00000438571 PLEKHO2Q8TD55 490 aa19.41■□□□□ 0.7
GTF3A-204ENST00000438571 GAB3Q8WWW8 586 aa19.41■□□□□ 0.7
GTF3A-204ENST00000438571 ZNF516Q92618 1163 aa19.41■□□□□ 0.7
GTF3A-204ENST00000438571 ELMO3Q96BJ8 720 aa19.41■□□□□ 0.7
GTF3A-204ENST00000438571 CCDC127Q96BQ5 260 aa19.41■□□□□ 0.7
GTF3A-204ENST00000438571 MMS19Q96T76 1030 aa19.41■□□□□ 0.7
GTF3A-204ENST00000438571 P2RY13Q9BPV8 354 aa19.41■□□□□ 0.7
GTF3A-204ENST00000438571 LINC00597Q9H2U6 94 aa19.41■□□□□ 0.7
GTF3A-204ENST00000438571 SMOC1Q9H4F8 434 aa19.41■□□□□ 0.7
GTF3A-204ENST00000438571 TPRP12270 2363 aaKnown RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms