RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 LRRC10BA6NIK2 292 aa17.15■□□□□ 0.34
SNRPB-202ENST00000438552 F8VP50 259 aa17.15■□□□□ 0.34
SNRPB-202ENST00000438552 NRG2O14511 850 aaPredicted RBP17.15■□□□□ 0.34
SNRPB-202ENST00000438552 AP1G2O75843 785 aa17.15■□□□□ 0.34
SNRPB-202ENST00000438552 CALCAP01258 141 aa17.15■□□□□ 0.34
SNRPB-202ENST00000438552 KRT5P13647 590 aa17.15■□□□□ 0.34
SNRPB-202ENST00000438552 PTPN2P17706 415 aa17.15■□□□□ 0.34
SNRPB-202ENST00000438552 GRIK1P39086 918 aa17.15■□□□□ 0.34
SNRPB-202ENST00000438552 RPL10AP62906 217 aaKnown RBP17.15■□□□□ 0.34
SNRPB-202ENST00000438552 UBXN1Q04323 297 aa17.15■□□□□ 0.34
SNRPB-202ENST00000438552 MTMR3Q13615 1198 aa17.15■□□□□ 0.34
SNRPB-202ENST00000438552 SYCP1Q15431 976 aa17.15■□□□□ 0.34
SNRPB-202ENST00000438552 PPP1R26Q5T8A7 1209 aaPredicted RBP17.15■□□□□ 0.34
SNRPB-202ENST00000438552 IQCEQ6IPM2 695 aa17.15■□□□□ 0.34
SNRPB-202ENST00000438552 ENOSF1Q7L5Y1 443 aa17.15■□□□□ 0.34
SNRPB-202ENST00000438552 TMC8Q8IU68 726 aa17.15■□□□□ 0.34
SNRPB-202ENST00000438552 RNF214Q8ND24 703 aa17.15■□□□□ 0.34
SNRPB-202ENST00000438552 CYFIP2Q96F07 1278 aa17.15■□□□□ 0.34
SNRPB-202ENST00000438552 SMARCD1Q96GM5 515 aa17.15■□□□□ 0.34
SNRPB-202ENST00000438552 PHF7Q9BWX1 381 aaPredicted RBP17.15■□□□□ 0.34
SNRPB-202ENST00000438552 DNAI2Q9GZS0 605 aa17.15■□□□□ 0.34
SNRPB-202ENST00000438552 ASAH2Q9NR71 780 aa17.15■□□□□ 0.34
SNRPB-202ENST00000438552 SIK3Q9Y2K2 1263 aa17.15■□□□□ 0.34
SNRPB-202ENST00000438552 RNF225M0QZC1 329 aaPredicted RBP17.14■□□□□ 0.33
SNRPB-202ENST00000438552 TRIM66O15016 1216 aa17.14■□□□□ 0.33
SNRPB-202ENST00000438552 PNMA6AP0CW24 399 aaPredicted RBP17.14■□□□□ 0.33
SNRPB-202ENST00000438552 MYL4P12829 197 aa17.14■□□□□ 0.33
SNRPB-202ENST00000438552 CD19P15391 556 aa17.14■□□□□ 0.33
SNRPB-202ENST00000438552 FSHRP23945 695 aa17.14■□□□□ 0.33
SNRPB-202ENST00000438552 ANXA13P27216 316 aa17.14■□□□□ 0.33
SNRPB-202ENST00000438552 CCR2P41597 374 aa17.14■□□□□ 0.33
SNRPB-202ENST00000438552 ZNF132P52740 706 aa17.14■□□□□ 0.33
SNRPB-202ENST00000438552 ZP2Q05996 745 aa17.14■□□□□ 0.33
SNRPB-202ENST00000438552 PTPN21Q16825 1174 aa17.14■□□□□ 0.33
SNRPB-202ENST00000438552 KLHDC7AQ5VTJ3 777 aa17.14■□□□□ 0.33
SNRPB-202ENST00000438552 ITIH5Q86UX2 942 aa17.14■□□□□ 0.33
SNRPB-202ENST00000438552 ITFG1Q8TB96 612 aa17.14■□□□□ 0.33
SNRPB-202ENST00000438552 ADAMTS19Q8TE59 1207 aa17.14■□□□□ 0.33
SNRPB-202ENST00000438552 ING5Q8WYH8 240 aa17.14■□□□□ 0.33
SNRPB-202ENST00000438552 TCEAL4Q96EI5 215 aa17.14■□□□□ 0.33
SNRPB-202ENST00000438552 RPGRIP1Q96KN7 1286 aa17.14■□□□□ 0.33
SNRPB-202ENST00000438552 NECAB3Q96P71 396 aaPredicted RBP17.14■□□□□ 0.33
SNRPB-202ENST00000438552 HNRNPABQ99729 332 aaKnown RBP17.14■□□□□ 0.33
SNRPB-202ENST00000438552 LRRC3Q9BY71 257 aa17.14■□□□□ 0.33
SNRPB-202ENST00000438552 GANQ9H2C0 597 aa17.14■□□□□ 0.33
SNRPB-202ENST00000438552 DMAP1Q9NPF5 467 aaPredicted RBP17.14■□□□□ 0.33
SNRPB-202ENST00000438552 FAM207AQ9NSI2 230 aaPredicted RBP17.14■□□□□ 0.33
SNRPB-202ENST00000438552 DNAJC12Q9UKB3 198 aa17.14■□□□□ 0.33
SNRPB-202ENST00000438552 ASB3Q9Y575 518 aa17.14■□□□□ 0.33
SNRPB-202ENST00000438552 CUL9Q8IWT3 2517 aa17.14■□□□□ 0.33
SNRPB-202ENST00000438552 VCANP13611 3396 aa17.13■□□□□ 0.33
SNRPB-202ENST00000438552 SLC38A8A6NNN8 435 aa17.13■□□□□ 0.33
SNRPB-202ENST00000438552 EPHB6O15197 1021 aa17.13■□□□□ 0.33
SNRPB-202ENST00000438552 TEX33O43247 280 aa17.13■□□□□ 0.33
SNRPB-202ENST00000438552 SERPINC1P01008 464 aa17.13■□□□□ 0.33
SNRPB-202ENST00000438552 FAM200BP0CF97 657 aa17.13■□□□□ 0.33
SNRPB-202ENST00000438552 CEBPBP17676 345 aa17.13■□□□□ 0.33
SNRPB-202ENST00000438552 USP8P40818 1118 aa17.13■□□□□ 0.33
SNRPB-202ENST00000438552 EPHA5P54756 1037 aa17.13■□□□□ 0.33
SNRPB-202ENST00000438552 RAPGEF1Q13905 1077 aa17.13■□□□□ 0.33
SNRPB-202ENST00000438552 GOLGA7BQ2TAP0 167 aa17.13■□□□□ 0.33
SNRPB-202ENST00000438552 SGO2Q562F6 1265 aa17.13■□□□□ 0.33
SNRPB-202ENST00000438552 PRSS36Q5K4E3 855 aa17.13■□□□□ 0.33
SNRPB-202ENST00000438552 PDZD4Q76G19 769 aaPredicted RBP17.13■□□□□ 0.33
SNRPB-202ENST00000438552 DNAJB7Q7Z6W7 309 aaPredicted RBP17.13■□□□□ 0.33
SNRPB-202ENST00000438552 ADHFE1Q8IWW8 467 aa17.13■□□□□ 0.33
SNRPB-202ENST00000438552 ZMIZ2Q8NF64 920 aa17.13■□□□□ 0.33
SNRPB-202ENST00000438552 SHC3Q92529 594 aa17.13■□□□□ 0.33
SNRPB-202ENST00000438552 JAKMIP2Q96AA8 810 aa17.13■□□□□ 0.33
SNRPB-202ENST00000438552 C8orf48Q96LL4 319 aa17.13■□□□□ 0.33
SNRPB-202ENST00000438552 FAM81BQ96LP2 452 aa17.13■□□□□ 0.33
SNRPB-202ENST00000438552 PCMTD1Q96MG8 357 aaPredicted RBP17.13■□□□□ 0.33
SNRPB-202ENST00000438552 ERGIC2Q96RQ1 377 aa17.13■□□□□ 0.33
SNRPB-202ENST00000438552 KCNK16Q96T55 309 aa17.13■□□□□ 0.33
SNRPB-202ENST00000438552 SMOQ99835 787 aa17.13■□□□□ 0.33
SNRPB-202ENST00000438552 PLCB1Q9NQ66 1216 aa17.13■□□□□ 0.33
SNRPB-202ENST00000438552 RTN4Q9NQC3 1192 aaKnown RBP17.13■□□□□ 0.33
SNRPB-202ENST00000438552 MAGED2Q9UNF1 606 aaPredicted RBP17.13■□□□□ 0.33
SNRPB-202ENST00000438552 CNTN6Q9UQ52 1028 aa17.13■□□□□ 0.33
SNRPB-202ENST00000438552 ANAPC1Q9H1A4 1944 aa17.13■□□□□ 0.33
SNRPB-202ENST00000438552 NUP210Q8TEM1 1887 aaPredicted RBP17.12■□□□□ 0.33
SNRPB-202ENST00000438552 C2CD4DB7Z1M9 353 aa17.12■□□□□ 0.33
SNRPB-202ENST00000438552 BEST1O76090 585 aa17.12■□□□□ 0.33
SNRPB-202ENST00000438552 NOL4O94818 638 aa17.12■□□□□ 0.33
SNRPB-202ENST00000438552 PAEPP09466 180 aa17.12■□□□□ 0.33
SNRPB-202ENST00000438552 CSH1P0DML2 217 aa17.12■□□□□ 0.33
SNRPB-202ENST00000438552 CSH2P0DML3 217 aa17.12■□□□□ 0.33
SNRPB-202ENST00000438552 UCHL3P15374 230 aa17.12■□□□□ 0.33
SNRPB-202ENST00000438552 HMGA1P17096 107 aaKnown RBP17.12■□□□□ 0.33
SNRPB-202ENST00000438552 GJA1P17302 382 aa17.12■□□□□ 0.33
SNRPB-202ENST00000438552 BRD2P25440 801 aaKnown RBP17.12■□□□□ 0.33
SNRPB-202ENST00000438552 GBP2P32456 591 aaPredicted RBP17.12■□□□□ 0.33
SNRPB-202ENST00000438552 MAP3K7CLP57077 242 aa17.12■□□□□ 0.33
SNRPB-202ENST00000438552 FANCCQ00597 558 aa17.12■□□□□ 0.33
SNRPB-202ENST00000438552 TAF12Q16514 161 aa17.12■□□□□ 0.33
SNRPB-202ENST00000438552 ARHGAP17Q68EM7 881 aa17.12■□□□□ 0.33
SNRPB-202ENST00000438552 CLEC20AQ6ZU45 233 aa17.12■□□□□ 0.33
SNRPB-202ENST00000438552 TDRD5Q8NAT2 981 aaKnown RBP17.12■□□□□ 0.33
SNRPB-202ENST00000438552 TFAP2BQ92481 460 aa17.12■□□□□ 0.33
SNRPB-202ENST00000438552 SPATA17Q96L03 361 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms