RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 DCLK1O15075 740 aa4.17□□□□□ -1.74
HMGB1P31-201ENST00000437242 AHSGP02765 367 aa4.17□□□□□ -1.74
HMGB1P31-201ENST00000437242 FTLP02792 175 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P31-201ENST00000437242 DLDP09622 509 aaKnown RBP4.17□□□□□ -1.74
HMGB1P31-201ENST00000437242 IL1R2P27930 398 aa4.17□□□□□ -1.74
HMGB1P31-201ENST00000437242 HK3P52790 923 aa4.17□□□□□ -1.74
HMGB1P31-201ENST00000437242 ITKQ08881 620 aa4.17□□□□□ -1.74
HMGB1P31-201ENST00000437242 ZNF268Q14587 947 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P31-201ENST00000437242 PPP1R3BQ86XI6 285 aa4.17□□□□□ -1.74
HMGB1P31-201ENST00000437242 TERB1Q8NA31 727 aa4.17□□□□□ -1.74
HMGB1P31-201ENST00000437242 PCSK9Q8NBP7 692 aaKnown RBP4.17□□□□□ -1.74
HMGB1P31-201ENST00000437242 ADAMTS15Q8TE58 950 aa4.17□□□□□ -1.74
HMGB1P31-201ENST00000437242 NSMCE1Q8WV22 266 aa4.17□□□□□ -1.74
HMGB1P31-201ENST00000437242 CUL5Q93034 780 aa4.17□□□□□ -1.74
HMGB1P31-201ENST00000437242 LMBRD1Q9NUN5 540 aa4.17□□□□□ -1.74
HMGB1P31-201ENST00000437242 GABRDO14764 452 aa4.16□□□□□ -1.74
HMGB1P31-201ENST00000437242 DSCR3O14972 297 aa4.16□□□□□ -1.74
HMGB1P31-201ENST00000437242 TJP3O95049 919 aa4.16□□□□□ -1.74
HMGB1P31-201ENST00000437242 PDE8BO95263 885 aa4.16□□□□□ -1.74
HMGB1P31-201ENST00000437242 CYP2A6P11509 494 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P31-201ENST00000437242 ATP5F1P24539 256 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P31-201ENST00000437242 SATB1Q01826 763 aa4.16□□□□□ -1.74
HMGB1P31-201ENST00000437242 EXOSC9Q06265 439 aaKnown RBP4.16□□□□□ -1.74
HMGB1P31-201ENST00000437242 E2F2Q14209 437 aa4.16□□□□□ -1.74
HMGB1P31-201ENST00000437242 MIDNQ504T8 468 aa4.16□□□□□ -1.74
HMGB1P31-201ENST00000437242 BRIX1Q8TDN6 353 aaKnown RBP4.16□□□□□ -1.74
HMGB1P31-201ENST00000437242 ZC3H10Q96K80 434 aaKnown RBP4.16□□□□□ -1.74
HMGB1P31-201ENST00000437242 FAM167AQ96KS9 214 aa4.16□□□□□ -1.74
HMGB1P31-201ENST00000437242 MOGAT1Q96PD6 335 aa4.16□□□□□ -1.74
HMGB1P31-201ENST00000437242 SNX18Q96RF0 628 aa4.16□□□□□ -1.74
HMGB1P31-201ENST00000437242 MTMR4Q9NYA4 1195 aa4.16□□□□□ -1.74
HMGB1P31-201ENST00000437242 SCAF8Q9UPN6 1271 aaKnown RBP4.16□□□□□ -1.74
HMGB1P31-201ENST00000437242 ATP8A1Q9Y2Q0 1164 aa4.16□□□□□ -1.74
HMGB1P31-201ENST00000437242 CCDC187A0A096LP49 1063 aa4.15□□□□□ -1.75
HMGB1P31-201ENST00000437242 UNC5CO95185 931 aa4.15□□□□□ -1.75
HMGB1P31-201ENST00000437242 TMEM191BP0C7N4 346 aa4.15□□□□□ -1.75
HMGB1P31-201ENST00000437242 TYRP14679 529 aa4.15□□□□□ -1.75
HMGB1P31-201ENST00000437242 CCKARP32238 428 aa4.15□□□□□ -1.75
HMGB1P31-201ENST00000437242 RENBPP51606 427 aa4.15□□□□□ -1.75
HMGB1P31-201ENST00000437242 GUCY2FP51841 1108 aa4.15□□□□□ -1.75
HMGB1P31-201ENST00000437242 LINC00205P59089 165 aa4.15□□□□□ -1.75
HMGB1P31-201ENST00000437242 MTMR1Q13613 665 aa4.15□□□□□ -1.75
HMGB1P31-201ENST00000437242 AMOTQ4VCS5 1084 aa4.15□□□□□ -1.75
HMGB1P31-201ENST00000437242 L1TD1Q5T7N2 865 aaKnown RBP4.15□□□□□ -1.75
HMGB1P31-201ENST00000437242 MTHFD1LQ6UB35 978 aa4.15□□□□□ -1.75
HMGB1P31-201ENST00000437242 IRF2BP2Q7Z5L9 587 aa4.15□□□□□ -1.75
HMGB1P31-201ENST00000437242 C16orf52Q8NHV5 167 aa4.15□□□□□ -1.75
HMGB1P31-201ENST00000437242 SPATA3Q8NHX4 192 aa4.15□□□□□ -1.75
HMGB1P31-201ENST00000437242 CIPCQ9C0C6 399 aa4.15□□□□□ -1.75
HMGB1P31-201ENST00000437242 CCDC8Q9H0W5 538 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P31-201ENST00000437242 WWOXQ9NZC7 414 aa4.15□□□□□ -1.75
HMGB1P31-201ENST00000437242 NDRG4Q9ULP0 352 aaKnown RBP4.15□□□□□ -1.75
HMGB1P31-201ENST00000437242 SHOC2Q9UQ13 582 aa4.15□□□□□ -1.75
HMGB1P31-201ENST00000437242 PCDHA1Q9Y5I3 950 aa4.15□□□□□ -1.75
HMGB1P31-201ENST00000437242 FAM90A10PA6NDY2 464 aa4.14□□□□□ -1.75
HMGB1P31-201ENST00000437242 FCHO1O14526 889 aa4.14□□□□□ -1.75
HMGB1P31-201ENST00000437242 PRKCBP05771 671 aa4.14□□□□□ -1.75
HMGB1P31-201ENST00000437242 GRPP07492 148 aa4.14□□□□□ -1.75
HMGB1P31-201ENST00000437242 PDE6CP51160 858 aa4.14□□□□□ -1.75
HMGB1P31-201ENST00000437242 ODF1Q14990 250 aa4.14□□□□□ -1.75
HMGB1P31-201ENST00000437242 RBMS2Q15434 407 aaKnown RBP4.14□□□□□ -1.75
HMGB1P31-201ENST00000437242 PTPN21Q16825 1174 aa4.14□□□□□ -1.75
HMGB1P31-201ENST00000437242 DEPDC1Q5TB30 811 aa4.14□□□□□ -1.75
HMGB1P31-201ENST00000437242 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P31-201ENST00000437242 KIAA1161Q6NSJ0 714 aa4.14□□□□□ -1.75
HMGB1P31-201ENST00000437242 ZNF813Q6ZN06 617 aa4.14□□□□□ -1.75
HMGB1P31-201ENST00000437242 SOCS4Q8WXH5 440 aa4.14□□□□□ -1.75
HMGB1P31-201ENST00000437242 COQ8BQ96D53 544 aa4.14□□□□□ -1.75
HMGB1P31-201ENST00000437242 LENG8Q96PV6 779 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P31-201ENST00000437242 THAP7Q9BT49 309 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P31-201ENST00000437242 DPCDQ9BVM2 203 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P31-201ENST00000437242 PNPOQ9NVS9 261 aa4.14□□□□□ -1.75
HMGB1P31-201ENST00000437242 TFCP2L1Q9NZI6 479 aa4.14□□□□□ -1.75
HMGB1P31-201ENST00000437242 GABRQQ9UN88 632 aa4.14□□□□□ -1.75
HMGB1P31-201ENST00000437242 PLEKHM1Q9Y4G2 1056 aa4.14□□□□□ -1.75
HMGB1P31-201ENST00000437242 LRP12Q9Y561 859 aa4.14□□□□□ -1.75
HMGB1P31-201ENST00000437242 TMEM232C9JQI7 657 aa4.13□□□□□ -1.75
HMGB1P31-201ENST00000437242 ADAM10O14672 748 aa4.13□□□□□ -1.75
HMGB1P31-201ENST00000437242 ERC2O15083 957 aa4.13□□□□□ -1.75
HMGB1P31-201ENST00000437242 ZRANB2O95218 330 aaKnown RBP eCLIP4.13□□□□□ -1.75
HMGB1P31-201ENST00000437242 PDCP20941 246 aa4.13□□□□□ -1.75
HMGB1P31-201ENST00000437242 CCND1P24385 295 aa4.13□□□□□ -1.75
HMGB1P31-201ENST00000437242 VIPR2P41587 438 aa4.13□□□□□ -1.75
HMGB1P31-201ENST00000437242 KCNJ5P48544 419 aa4.13□□□□□ -1.75
HMGB1P31-201ENST00000437242 ALDH5A1P51649 535 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P31-201ENST00000437242 MAP2K6P52564 334 aa4.13□□□□□ -1.75
HMGB1P31-201ENST00000437242 GHRHRQ02643 423 aa4.13□□□□□ -1.75
HMGB1P31-201ENST00000437242 CCDC157Q569K6 752 aa4.13□□□□□ -1.75
HMGB1P31-201ENST00000437242 KRTAP5-11Q6L8G4 156 aa4.13□□□□□ -1.75
HMGB1P31-201ENST00000437242 SLC15A3Q8IY34 581 aa4.13□□□□□ -1.75
HMGB1P31-201ENST00000437242 OSCP1Q8WVF1 389 aa4.13□□□□□ -1.75
HMGB1P31-201ENST00000437242 FYTTD1Q96QD9 318 aaKnown RBP4.13□□□□□ -1.75
HMGB1P31-201ENST00000437242 EFHD1Q9BUP0 239 aa4.13□□□□□ -1.75
HMGB1P31-201ENST00000437242 SLC13A1Q9BZW2 595 aa4.13□□□□□ -1.75
HMGB1P31-201ENST00000437242 KATNA1O75449 491 aa4.12□□□□□ -1.75
HMGB1P31-201ENST00000437242 GCATO75600 419 aa4.12□□□□□ -1.75
HMGB1P31-201ENST00000437242 RNF8O76064 485 aa4.12□□□□□ -1.75
HMGB1P31-201ENST00000437242 PRF1P14222 555 aa4.12□□□□□ -1.75
HMGB1P31-201ENST00000437242 FPR3P25089 353 aa4.12□□□□□ -1.75
HMGB1P31-201ENST00000437242 LRPAP1P30533 357 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms