RNA–Protein interactions for RNA: ENST00000434760.5

NUP50-210, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 763 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-210ENST00000434760 SEMA4AQ9H3S1 761 aa16.84■□□□□ 0.29
NUP50-210ENST00000434760 DPEP3Q9H4B8 488 aa16.84■□□□□ 0.29
NUP50-210ENST00000434760 KIF9Q9HAQ2 790 aa16.84■□□□□ 0.29
NUP50-210ENST00000434760 HPS4Q9NQG7 708 aa16.84■□□□□ 0.29
NUP50-210ENST00000434760 MAGED2Q9UNF1 606 aaPredicted RBP16.84■□□□□ 0.29
NUP50-210ENST00000434760 SOBPA7XYQ1 873 aa16.83■□□□□ 0.28
NUP50-210ENST00000434760 DPYSL4O14531 572 aa16.83■□□□□ 0.28
NUP50-210ENST00000434760 RHOBTB3O94955 611 aa16.83■□□□□ 0.28
NUP50-210ENST00000434760 VNN1O95497 513 aa16.83■□□□□ 0.28
NUP50-210ENST00000434760 LMNAP02545 664 aaKnown RBP16.83■□□□□ 0.28
NUP50-210ENST00000434760 NR3C1P04150 777 aa16.83■□□□□ 0.28
NUP50-210ENST00000434760 RPN1P04843 607 aaKnown RBP16.83■□□□□ 0.28
NUP50-210ENST00000434760 SYKP43405 635 aa16.83■□□□□ 0.28
NUP50-210ENST00000434760 CACNA2D1P54289 1103 aa16.83■□□□□ 0.28
NUP50-210ENST00000434760 PLCB2Q00722 1185 aa16.83■□□□□ 0.28
NUP50-210ENST00000434760 ZNF268Q14587 947 aaPredicted RBP16.83■□□□□ 0.28
NUP50-210ENST00000434760 WDR72Q3MJ13 1102 aa16.83■□□□□ 0.28
NUP50-210ENST00000434760 C1orf228Q6PIY5 440 aa16.83■□□□□ 0.28
NUP50-210ENST00000434760 VSTM1Q6UX27 236 aa16.83■□□□□ 0.28
NUP50-210ENST00000434760 MAMSTRQ6ZN01 415 aa16.83■□□□□ 0.28
NUP50-210ENST00000434760 ADSSL1Q8N142 457 aa16.83■□□□□ 0.28
NUP50-210ENST00000434760 MYCBPAPQ8TBZ2 947 aa16.83■□□□□ 0.28
NUP50-210ENST00000434760 CSGALNACT1Q8TDX6 532 aa16.83■□□□□ 0.28
NUP50-210ENST00000434760 SPATA17Q96L03 361 aa16.83■□□□□ 0.28
NUP50-210ENST00000434760 MMS19Q96T76 1030 aa16.83■□□□□ 0.28
NUP50-210ENST00000434760 FAM83CQ9BQN1 747 aa16.83■□□□□ 0.28
NUP50-210ENST00000434760 SMYD3Q9H7B4 428 aa16.83■□□□□ 0.28
NUP50-210ENST00000434760 C8orf33Q9H7E9 229 aaPredicted RBP16.83■□□□□ 0.28
NUP50-210ENST00000434760 UXTQ9UBK9 157 aaPredicted RBP16.83■□□□□ 0.28
NUP50-210ENST00000434760 R3HCC1Q9Y3T6 440 aaKnown RBP16.83■□□□□ 0.28
NUP50-210ENST00000434760 ATG2BQ96BY7 2078 aa16.82■□□□□ 0.28
NUP50-210ENST00000434760 PDXKO00764 312 aa16.82■□□□□ 0.28
NUP50-210ENST00000434760 LILRB5O75023 590 aa16.82■□□□□ 0.28
NUP50-210ENST00000434760 BDNFP23560 247 aa16.82■□□□□ 0.28
NUP50-210ENST00000434760 ATICP31939 592 aa16.82■□□□□ 0.28
NUP50-210ENST00000434760 AVPR1AP37288 418 aa16.82■□□□□ 0.28
NUP50-210ENST00000434760 USP46P62068 366 aa16.82■□□□□ 0.28
NUP50-210ENST00000434760 DLG4P78352 724 aa16.82■□□□□ 0.28
NUP50-210ENST00000434760 MAPRE1Q15691 268 aaKnown RBP16.82■□□□□ 0.28
NUP50-210ENST00000434760 ZNF77Q15935 545 aa16.82■□□□□ 0.28
NUP50-210ENST00000434760 MDH1BQ5I0G3 518 aa16.82■□□□□ 0.28
NUP50-210ENST00000434760 C1orf220Q5T0J3 134 aa16.82■□□□□ 0.28
NUP50-210ENST00000434760 TSSK4Q6SA08 328 aa16.82■□□□□ 0.28
NUP50-210ENST00000434760 Q6ZS52 159 aa16.82■□□□□ 0.28
NUP50-210ENST00000434760 RALGPS2Q86X27 583 aaPredicted RBP16.82■□□□□ 0.28
NUP50-210ENST00000434760 SCN4BQ8IWT1 228 aa16.82■□□□□ 0.28
NUP50-210ENST00000434760 FSIP1Q8NA03 581 aa16.82■□□□□ 0.28
NUP50-210ENST00000434760 SUMF1Q8NBK3 374 aa16.82■□□□□ 0.28
NUP50-210ENST00000434760 MRPS31Q92665 395 aaKnown RBP16.82■□□□□ 0.28
NUP50-210ENST00000434760 SYAP1Q96A49 352 aaPredicted RBP16.82■□□□□ 0.28
NUP50-210ENST00000434760 CEP295NLQ96MC4 621 aa16.82■□□□□ 0.28
NUP50-210ENST00000434760 TTLL2Q9BWV7 592 aa16.82■□□□□ 0.28
NUP50-210ENST00000434760 SCAND2PQ9GZW5 306 aaPredicted RBP16.82■□□□□ 0.28
NUP50-210ENST00000434760 SDCBP2Q9H190 292 aa16.82■□□□□ 0.28
NUP50-210ENST00000434760 TDP1Q9NUW8 608 aa16.82■□□□□ 0.28
NUP50-210ENST00000434760 GCNT4Q9P109 453 aa16.82■□□□□ 0.28
NUP50-210ENST00000434760 PCDHGA2Q9Y5H1 932 aa16.82■□□□□ 0.28
NUP50-210ENST00000434760 SPAG17Q6Q759 2223 aa16.81■□□□□ 0.28
NUP50-210ENST00000434760 OTOL1A6NHN0 477 aaPredicted RBP16.81■□□□□ 0.28
NUP50-210ENST00000434760 C4BPAP04003 597 aaKnown RBP16.81■□□□□ 0.28
NUP50-210ENST00000434760 PDGFRBP09619 1106 aa16.81■□□□□ 0.28
NUP50-210ENST00000434760 FAM163BP0C2L3 166 aa16.81■□□□□ 0.28
NUP50-210ENST00000434760 KPNA1P52294 538 aaPredicted RBP16.81■□□□□ 0.28
NUP50-210ENST00000434760 TNNC1P63316 161 aa16.81■□□□□ 0.28
NUP50-210ENST00000434760 CSTF1Q05048 431 aaKnown RBP16.81■□□□□ 0.28
NUP50-210ENST00000434760 CCINQ13939 588 aa16.81■□□□□ 0.28
NUP50-210ENST00000434760 ZNF699Q32M78 642 aa16.81■□□□□ 0.28
NUP50-210ENST00000434760 ZACNQ401N2 412 aa16.81■□□□□ 0.28
NUP50-210ENST00000434760 KRBA2Q6ZNG9 492 aa16.81■□□□□ 0.28
NUP50-210ENST00000434760 B3GALNT2Q8NCR0 500 aa16.81■□□□□ 0.28
NUP50-210ENST00000434760 TTC8Q8TAM2 541 aa16.81■□□□□ 0.28
NUP50-210ENST00000434760 ELMO3Q96BJ8 720 aa16.81■□□□□ 0.28
NUP50-210ENST00000434760 ZNF518BQ9C0D4 1074 aa16.81■□□□□ 0.28
NUP50-210ENST00000434760 LMAN1LQ9HAT1 526 aa16.81■□□□□ 0.28
NUP50-210ENST00000434760 GDPD2Q9HCC8 539 aa16.81■□□□□ 0.28
NUP50-210ENST00000434760 RBM12Q9NTZ6 932 aaKnown RBP16.81■□□□□ 0.28
NUP50-210ENST00000434760 MAGEC2Q9UBF1 373 aaPredicted RBP16.81■□□□□ 0.28
NUP50-210ENST00000434760 TRAF3IP3Q9Y228 551 aa16.81■□□□□ 0.28
NUP50-210ENST00000434760 C2orf78A6NCI8 922 aa16.8■□□□□ 0.28
NUP50-210ENST00000434760 F8VP50 259 aa16.8■□□□□ 0.28
NUP50-210ENST00000434760 RAP1GAPP47736 663 aa16.8■□□□□ 0.28
NUP50-210ENST00000434760 AP3M2P53677 418 aa16.8■□□□□ 0.28
NUP50-210ENST00000434760 NOP14P78316 857 aaKnown RBP16.8■□□□□ 0.28
NUP50-210ENST00000434760 SATB1Q01826 763 aa16.8■□□□□ 0.28
NUP50-210ENST00000434760 CYP27A1Q02318 531 aa16.8■□□□□ 0.28
NUP50-210ENST00000434760 FAM160A1Q05DH4 1040 aa16.8■□□□□ 0.28
NUP50-210ENST00000434760 NCOA4Q13772 614 aa16.8■□□□□ 0.28
NUP50-210ENST00000434760 NFIL3Q16649 462 aa16.8■□□□□ 0.28
NUP50-210ENST00000434760 ITPRIPL2Q3MIP1 535 aa16.8■□□□□ 0.28
NUP50-210ENST00000434760 ZCWPW2Q504Y3 356 aa16.8■□□□□ 0.28
NUP50-210ENST00000434760 TRIM68Q6AZZ1 485 aa16.8■□□□□ 0.28
NUP50-210ENST00000434760 ELOVL4Q9GZR5 314 aa16.8■□□□□ 0.28
NUP50-210ENST00000434760 SNX25Q9H3E2 840 aa16.8■□□□□ 0.28
NUP50-210ENST00000434760 ZSCAN32Q9NX65 697 aa16.8■□□□□ 0.28
NUP50-210ENST00000434760 NXF1Q9UBU9 619 aaKnown RBP16.8■□□□□ 0.28
NUP50-210ENST00000434760 ATP6V1DQ9Y5K8 247 aa16.8■□□□□ 0.28
NUP50-210ENST00000434760 LAMA1P25391 3075 aa16.8■□□□□ 0.28
NUP50-210ENST00000434760 TRIM66O15016 1216 aa16.79■□□□□ 0.28
NUP50-210ENST00000434760 KINO60870 393 aaKnown RBP16.79■□□□□ 0.28
NUP50-210ENST00000434760 PAPSS2O95340 614 aaPredicted RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms