RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 A0A0U1RQJ8 604 aa27.98■■■□□ 2.07
TMEM248-205ENST00000433271 TMEM253P0C7T8 217 aa27.98■■■□□ 2.07
TMEM248-205ENST00000433271 CTSAP10619 480 aa27.98■■■□□ 2.07
TMEM248-205ENST00000433271 PBX2P40425 430 aa27.98■■■□□ 2.07
TMEM248-205ENST00000433271 C1QBPQ07021 282 aaKnown RBP27.98■■■□□ 2.07
TMEM248-205ENST00000433271 ERICH1Q86X53 443 aa27.98■■■□□ 2.07
TMEM248-205ENST00000433271 ATRIPQ8WXE1 791 aa27.98■■■□□ 2.07
TMEM248-205ENST00000433271 CTNNBL1Q8WYA6 563 aaPredicted RBP27.98■■■□□ 2.07
TMEM248-205ENST00000433271 TRIM11Q96F44 468 aa27.98■■■□□ 2.07
TMEM248-205ENST00000433271 ADAM22Q9P0K1 906 aa27.98■■■□□ 2.07
TMEM248-205ENST00000433271 MSRAQ9UJ68 235 aa27.98■■■□□ 2.07
TMEM248-205ENST00000433271 SSX2IPQ9Y2D8 614 aa27.98■■■□□ 2.07
TMEM248-205ENST00000433271 NLRC5Q86WI3 1866 aa27.98■■■□□ 2.07
TMEM248-205ENST00000433271 GBF1Q92538 1859 aa27.97■■■□□ 2.07
TMEM248-205ENST00000433271 GOLGA6L9A6NEM1 432 aa27.97■■■□□ 2.07
TMEM248-205ENST00000433271 CPB1P15086 417 aa27.97■■■□□ 2.07
TMEM248-205ENST00000433271 ABCB4P21439 1286 aa27.97■■■□□ 2.07
TMEM248-205ENST00000433271 CDR1P51861 262 aa27.97■■■□□ 2.07
TMEM248-205ENST00000433271 ERVK-21P61565 698 aa27.97■■■□□ 2.07
TMEM248-205ENST00000433271 TAP1Q03518 808 aa27.97■■■□□ 2.07
TMEM248-205ENST00000433271 UBE3AQ05086 875 aa27.97■■■□□ 2.07
TMEM248-205ENST00000433271 PDCLQ13371 301 aa27.97■■■□□ 2.07
TMEM248-205ENST00000433271 RAB30Q15771 203 aa27.97■■■□□ 2.07
TMEM248-205ENST00000433271 CFAP221Q4G0U5 840 aa27.97■■■□□ 2.07
TMEM248-205ENST00000433271 FUBP3Q96I24 572 aaKnown RBP eCLIP27.97■■■□□ 2.07
TMEM248-205ENST00000433271 CLSTN3Q9BQT9 956 aa27.97■■■□□ 2.07
TMEM248-205ENST00000433271 C11orf84Q9BUA3 381 aaPredicted RBP27.97■■■□□ 2.07
TMEM248-205ENST00000433271 TSGA10Q9BZW7 698 aa27.97■■■□□ 2.07
TMEM248-205ENST00000433271 THAP2Q9H0W7 228 aa27.97■■■□□ 2.07
TMEM248-205ENST00000433271 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP27.97■■■□□ 2.07
TMEM248-205ENST00000433271 LILRB3O75022 631 aa27.96■■■□□ 2.07
TMEM248-205ENST00000433271 AP1G2O75843 785 aa27.96■■■□□ 2.07
TMEM248-205ENST00000433271 MYBL1P10243 752 aa27.96■■■□□ 2.07
TMEM248-205ENST00000433271 BDNFP23560 247 aa27.96■■■□□ 2.07
TMEM248-205ENST00000433271 ARHGAP25P42331 645 aa27.96■■■□□ 2.07
TMEM248-205ENST00000433271 ARPP19P56211 112 aa27.96■■■□□ 2.07
TMEM248-205ENST00000433271 GPC5P78333 572 aa27.96■■■□□ 2.07
TMEM248-205ENST00000433271 PTP4A2Q12974 167 aa27.96■■■□□ 2.07
TMEM248-205ENST00000433271 MMS22LQ6ZRQ5 1243 aa27.96■■■□□ 2.07
TMEM248-205ENST00000433271 CLEC20AQ6ZU45 233 aa27.96■■■□□ 2.07
TMEM248-205ENST00000433271 MSANTD4Q8NCY6 345 aa27.96■■■□□ 2.07
TMEM248-205ENST00000433271 SPPL3Q8TCT6 385 aa27.96■■■□□ 2.07
TMEM248-205ENST00000433271 CSNK1G1Q9HCP0 422 aa27.96■■■□□ 2.07
TMEM248-205ENST00000433271 ALG13Q9NP73 1137 aaKnown RBP27.96■■■□□ 2.07
TMEM248-205ENST00000433271 LZTFL1Q9NQ48 299 aa27.96■■■□□ 2.07
TMEM248-205ENST00000433271 XPO1O14980 1071 aaKnown RBP27.96■■■□□ 2.07
TMEM248-205ENST00000433271 KRT86O43790 486 aa27.96■■■□□ 2.07
TMEM248-205ENST00000433271 CALB1P05937 261 aa27.96■■■□□ 2.07
TMEM248-205ENST00000433271 RPL17P18621 184 aaKnown RBP27.96■■■□□ 2.07
TMEM248-205ENST00000433271 DNAJB2P25686 324 aa27.96■■■□□ 2.07
TMEM248-205ENST00000433271 OR1D2P34982 312 aa27.96■■■□□ 2.07
TMEM248-205ENST00000433271 PLA2G4AP47712 749 aa27.96■■■□□ 2.07
TMEM248-205ENST00000433271 CREMQ03060 361 aa27.96■■■□□ 2.07
TMEM248-205ENST00000433271 PTPN20Q4JDL3 420 aa27.96■■■□□ 2.07
TMEM248-205ENST00000433271 PMF1Q6P1K2 205 aa27.96■■■□□ 2.07
TMEM248-205ENST00000433271 SPRED2Q7Z698 418 aa27.96■■■□□ 2.07
TMEM248-205ENST00000433271 CPXM1Q96SM3 734 aa27.96■■■□□ 2.07
TMEM248-205ENST00000433271 C11orf70Q9BRQ4 267 aa27.96■■■□□ 2.07
TMEM248-205ENST00000433271 ABCB6Q9NP58 842 aa27.96■■■□□ 2.07
TMEM248-205ENST00000433271 MTUS1Q9ULD2 1270 aa27.96■■■□□ 2.07
TMEM248-205ENST00000433271 PCDHB5Q9Y5E4 795 aa27.96■■■□□ 2.07
TMEM248-205ENST00000433271 BTNL10A8MVZ5 291 aa27.95■■■□□ 2.06
TMEM248-205ENST00000433271 ESPNB1AK53 854 aa27.95■■■□□ 2.06
TMEM248-205ENST00000433271 TULP2O00295 520 aa27.95■■■□□ 2.06
TMEM248-205ENST00000433271 ADAM12O43184 909 aa27.95■■■□□ 2.06
TMEM248-205ENST00000433271 BEST1O76090 585 aa27.95■■■□□ 2.06
TMEM248-205ENST00000433271 PTPN14Q15678 1187 aa27.95■■■□□ 2.06
TMEM248-205ENST00000433271 ARHGAP29Q52LW3 1261 aa27.95■■■□□ 2.06
TMEM248-205ENST00000433271 C2orf15Q8WU43 125 aaKnown RBP27.95■■■□□ 2.06
TMEM248-205ENST00000433271 SMOQ99835 787 aa27.95■■■□□ 2.06
TMEM248-205ENST00000433271 SLC4A5Q9BY07 1137 aa27.95■■■□□ 2.06
TMEM248-205ENST00000433271 RHOBTB2Q9BYZ6 727 aa27.95■■■□□ 2.06
TMEM248-205ENST00000433271 UBXN6Q9BZV1 441 aa27.95■■■□□ 2.06
TMEM248-205ENST00000433271 RXFP1Q9HBX9 757 aa27.95■■■□□ 2.06
TMEM248-205ENST00000433271 CYLDQ9NQC7 956 aa27.95■■■□□ 2.06
TMEM248-205ENST00000433271 ST7Q9NRC1 585 aa27.95■■■□□ 2.06
TMEM248-205ENST00000433271 ABI2Q9NYB9 513 aaPredicted RBP27.95■■■□□ 2.06
TMEM248-205ENST00000433271 FNIP2Q9P278 1114 aa27.95■■■□□ 2.06
TMEM248-205ENST00000433271 DUSP10Q9Y6W6 482 aa27.95■■■□□ 2.06
TMEM248-205ENST00000433271 GABRB2P47870 512 aa27.94■■■□□ 2.06
TMEM248-205ENST00000433271 RPL34P49207 117 aaKnown RBP27.94■■■□□ 2.06
TMEM248-205ENST00000433271 MAP3K7CLP57077 242 aa27.94■■■□□ 2.06
TMEM248-205ENST00000433271 SNX16P57768 344 aa27.94■■■□□ 2.06
TMEM248-205ENST00000433271 LIN9Q5TKA1 542 aa27.94■■■□□ 2.06
TMEM248-205ENST00000433271 TMC7Q7Z402 723 aa27.94■■■□□ 2.06
TMEM248-205ENST00000433271 C18orf8Q96DM3 657 aa27.94■■■□□ 2.06
TMEM248-205ENST00000433271 HSFY1Q96LI6 401 aa27.94■■■□□ 2.06
TMEM248-205ENST00000433271 MIS12Q9H081 205 aa27.94■■■□□ 2.06
TMEM248-205ENST00000433271 SYNCQ9H7C4 482 aa27.94■■■□□ 2.06
TMEM248-205ENST00000433271 TRIM10Q9UDY6 481 aa27.94■■■□□ 2.06
TMEM248-205ENST00000433271 PLXNA4Q9HCM2 1894 aa27.94■■■□□ 2.06
TMEM248-205ENST00000433271 ABL1P00519 1130 aa27.93■■■□□ 2.06
TMEM248-205ENST00000433271 CYP1A2P05177 515 aa27.93■■■□□ 2.06
TMEM248-205ENST00000433271 CACNA2D1P54289 1103 aa27.93■■■□□ 2.06
TMEM248-205ENST00000433271 ROR1Q01973 937 aa27.93■■■□□ 2.06
TMEM248-205ENST00000433271 C2CD6Q53TS8 623 aa27.93■■■□□ 2.06
TMEM248-205ENST00000433271 RNF19BQ6ZMZ0 732 aa27.93■■■□□ 2.06
TMEM248-205ENST00000433271 TMEM110Q86TL2 294 aa27.93■■■□□ 2.06
TMEM248-205ENST00000433271 PIGZQ86VD9 579 aa27.93■■■□□ 2.06
TMEM248-205ENST00000433271 SPPL2BQ8TCT7 592 aa27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms