RNA–Protein interactions for RNA: ENST00000432072.6

FN1-209, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,759 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-209ENST00000432072 SERAC1Q96JX3 654 aa10.36□□□□□ -0.75
FN1-209ENST00000432072 TRMT6Q9UJA5 497 aaKnown RBP10.36□□□□□ -0.75
FN1-209ENST00000432072 SF3B1O75533 1304 aaKnown RBP eCLIP10.36□□□□□ -0.758e-6■■■■■ 107
FN1-209ENST00000432072 MEFVO15553 781 aaPredicted RBP10.36□□□□□ -0.75
FN1-209ENST00000432072 TRADDQ15628 312 aa10.36□□□□□ -0.75
FN1-209ENST00000432072 SNF8Q96H20 258 aa10.36□□□□□ -0.75
FN1-209ENST00000432072 TACO1Q9BSH4 297 aaKnown RBP10.36□□□□□ -0.75
FN1-209ENST00000432072 RTFDC1Q9BY42 306 aaPredicted RBP10.36□□□□□ -0.75
FN1-209ENST00000432072 PDE11AQ9HCR9 933 aa10.36□□□□□ -0.75
FN1-209ENST00000432072 TSPAN3O60637 253 aa10.36□□□□□ -0.75
FN1-209ENST00000432072 PRR29P0C7W0 189 aa10.36□□□□□ -0.75
FN1-209ENST00000432072 TNNI3P19429 210 aa10.36□□□□□ -0.75
FN1-209ENST00000432072 HALP42357 657 aa10.36□□□□□ -0.75
FN1-209ENST00000432072 PGM5Q15124 567 aa10.36□□□□□ -0.75
FN1-209ENST00000432072 TMEM259Q4ZIN3 620 aa10.36□□□□□ -0.75
FN1-209ENST00000432072 ARL8AQ96BM9 186 aa10.36□□□□□ -0.75
FN1-209ENST00000432072 FAR2Q96K12 515 aa10.36□□□□□ -0.75
FN1-209ENST00000432072 PACSIN2Q9UNF0 486 aaPredicted RBP10.36□□□□□ -0.75
FN1-209ENST00000432072 FMN2Q9NZ56 1722 aa10.36□□□□□ -0.75
FN1-209ENST00000432072 MLNP12872 115 aa10.36□□□□□ -0.75
FN1-209ENST00000432072 MSH3P20585 1137 aa10.36□□□□□ -0.75
FN1-209ENST00000432072 MARSP56192 900 aaKnown RBP10.36□□□□□ -0.75
FN1-209ENST00000432072 RHOAP61586 193 aa10.36□□□□□ -0.75
FN1-209ENST00000432072 POLR2LP62875 67 aaKnown RBP10.36□□□□□ -0.75
FN1-209ENST00000432072 SKP1P63208 163 aa10.36□□□□□ -0.75
FN1-209ENST00000432072 OTOP2Q7RTS6 562 aa10.36□□□□□ -0.75
FN1-209ENST00000432072 NAF1Q96HR8 494 aaKnown RBP10.36□□□□□ -0.75
FN1-209ENST00000432072 PPP1R16AQ96I34 528 aa10.36□□□□□ -0.75
FN1-209ENST00000432072 ZCWPW1Q9H0M4 648 aa10.36□□□□□ -0.75
FN1-209ENST00000432072 BRD9Q9H8M2 597 aa10.36□□□□□ -0.75
FN1-209ENST00000432072 NRBP1Q9UHY1 535 aa10.36□□□□□ -0.75
FN1-209ENST00000432072 XPO7Q9UIA9 1087 aaKnown RBP10.36□□□□□ -0.75
FN1-209ENST00000432072 PHF20L1A8MW92 1017 aa10.35□□□□□ -0.75
FN1-209ENST00000432072 RHOBTB1O94844 696 aa10.35□□□□□ -0.75
FN1-209ENST00000432072 ELNP15502 786 aa10.35□□□□□ -0.75
FN1-209ENST00000432072 PDCD7Q8N8D1 485 aaKnown RBP10.35□□□□□ -0.75
FN1-209ENST00000432072 KIAA1257Q9ULG3 409 aa10.35□□□□□ -0.75
FN1-209ENST00000432072 KIF13AQ9H1H9 1805 aa10.35□□□□□ -0.75
FN1-209ENST00000432072 MSH4O15457 936 aa10.35□□□□□ -0.75
FN1-209ENST00000432072 ESRRAP11474 423 aaPredicted RBP10.35□□□□□ -0.75
FN1-209ENST00000432072 TRIM68Q6AZZ1 485 aa10.35□□□□□ -0.75
FN1-209ENST00000432072 CCDC197Q8NCU1 140 aa10.35□□□□□ -0.75
FN1-209ENST00000432072 C7orf25Q9BPX7 421 aa10.35□□□□□ -0.75
FN1-209ENST00000432072 PHF20Q9BVI0 1012 aa10.35□□□□□ -0.75
FN1-209ENST00000432072 ITGA11Q9UKX5 1188 aa10.35□□□□□ -0.75
FN1-209ENST00000432072 FARP2O94887 1054 aaPredicted RBP10.35□□□□□ -0.75
FN1-209ENST00000432072 GUCA1CO95843 209 aa10.35□□□□□ -0.75
FN1-209ENST00000432072 CENPCQ03188 943 aa10.35□□□□□ -0.75
FN1-209ENST00000432072 MKRN4PQ13434 485 aaPredicted RBP10.35□□□□□ -0.75
FN1-209ENST00000432072 RIOX2Q8IUF8 465 aa10.35□□□□□ -0.75
FN1-209ENST00000432072 MMGT1Q8N4V1 131 aa10.35□□□□□ -0.75
FN1-209ENST00000432072 SYT2Q8N9I0 419 aaPredicted RBP10.35□□□□□ -0.75
FN1-209ENST00000432072 PPP1R36Q96LQ0 422 aa10.35□□□□□ -0.75
FN1-209ENST00000432072 OXCT2Q9BYC2 517 aaPredicted RBP10.35□□□□□ -0.75
FN1-209ENST00000432072 TIMM13Q9Y5L4 95 aaPredicted RBP10.35□□□□□ -0.75
FN1-209ENST00000432072 GAKO14976 1311 aa10.35□□□□□ -0.75
FN1-209ENST00000432072 SYCE1LA8MT33 242 aa10.35□□□□□ -0.75
FN1-209ENST00000432072 CYP11B2P19099 503 aa10.35□□□□□ -0.75
FN1-209ENST00000432072 FGFR4P22455 802 aa10.35□□□□□ -0.75
FN1-209ENST00000432072 MED21Q13503 144 aa10.35□□□□□ -0.75
FN1-209ENST00000432072 DACT2Q5SW24 774 aa10.35□□□□□ -0.75
FN1-209ENST00000432072 FBXL19Q6PCT2 694 aa10.35□□□□□ -0.75
FN1-209ENST00000432072 CCDC137Q6PK04 289 aaKnown RBP10.35□□□□□ -0.75
FN1-209ENST00000432072 ZNF557Q8N988 423 aaPredicted RBP10.35□□□□□ -0.75
FN1-209ENST00000432072 CERS4Q9HA82 394 aa10.35□□□□□ -0.75
FN1-209ENST00000432072 GPRC5CQ9NQ84 441 aa10.35□□□□□ -0.75
FN1-209ENST00000432072 KANSL1LA0AUZ9 987 aa10.35□□□□□ -0.75
FN1-209ENST00000432072 KPNA3O00505 521 aaPredicted RBP10.35□□□□□ -0.75
FN1-209ENST00000432072 F9P00740 461 aa10.35□□□□□ -0.75
FN1-209ENST00000432072 MRPS6P82932 125 aaKnown RBP10.35□□□□□ -0.75
FN1-209ENST00000432072 TRIM65Q6PJ69 517 aa10.35□□□□□ -0.75
FN1-209ENST00000432072 GET4Q7L5D6 327 aaPredicted RBP10.35□□□□□ -0.75
FN1-209ENST00000432072 SLFN11Q7Z7L1 901 aa10.35□□□□□ -0.75
FN1-209ENST00000432072 ZBED8Q8IZ13 594 aa10.35□□□□□ -0.75
FN1-209ENST00000432072 SMARCD1Q96GM5 515 aa10.35□□□□□ -0.75
FN1-209ENST00000432072 CNOT10Q9H9A5 744 aaKnown RBP10.35□□□□□ -0.75
FN1-209ENST00000432072 NSMCE4AQ9NXX6 385 aa10.35□□□□□ -0.75
FN1-209ENST00000432072 ADA2Q9NZK5 511 aa10.35□□□□□ -0.75
FN1-209ENST00000432072 GTF2A1P52655 376 aaPredicted RBP10.35□□□□□ -0.75
FN1-209ENST00000432072 SLC30A10Q6XR72 485 aa10.35□□□□□ -0.75
FN1-209ENST00000432072 CLYBLQ8N0X4 340 aa10.35□□□□□ -0.75
FN1-209ENST00000432072 CXorf38Q8TB03 319 aa10.35□□□□□ -0.75
FN1-209ENST00000432072 SYTL5Q8TDW5 730 aaPredicted RBP10.35□□□□□ -0.75
FN1-209ENST00000432072 JADE3Q92613 823 aa10.35□□□□□ -0.75
FN1-209ENST00000432072 CEP19Q96LK0 163 aa10.35□□□□□ -0.75
FN1-209ENST00000432072 GBP5Q96PP8 586 aa10.35□□□□□ -0.75
FN1-209ENST00000432072 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.35□□□□□ -0.75
FN1-209ENST00000432072 MTA2O94776 668 aa10.34□□□□□ -0.75
FN1-209ENST00000432072 FBXO21O94952 628 aa10.34□□□□□ -0.75
FN1-209ENST00000432072 FXR2P51116 673 aaKnown RBP eCLIP10.34□□□□□ -0.75
FN1-209ENST00000432072 CNTN2Q02246 1040 aa10.34□□□□□ -0.75
FN1-209ENST00000432072 VSTM4Q8IW00 320 aa10.34□□□□□ -0.75
FN1-209ENST00000432072 GLMNQ92990 594 aa10.34□□□□□ -0.75
FN1-209ENST00000432072 FAM96AQ9H5X1 160 aa10.34□□□□□ -0.75
FN1-209ENST00000432072 RIC1Q4ADV7 1423 aa10.34□□□□□ -0.75
FN1-209ENST00000432072 ARP10275 920 aa10.34□□□□□ -0.75
FN1-209ENST00000432072 GUCY2CP25092 1073 aa10.34□□□□□ -0.75
FN1-209ENST00000432072 ESRRGP62508 458 aa10.34□□□□□ -0.75
FN1-209ENST00000432072 CLEC16AQ2KHT3 1053 aa10.34□□□□□ -0.75
FN1-209ENST00000432072 SETMARQ53H47 684 aaPredicted RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms