RNA–Protein interactions for RNA: ENST00000429899.1

ATG4B-211, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 524 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-211ENST00000429899 MLKLQ8NB16 471 aa10.89□□□□□ -0.67
ATG4B-211ENST00000429899 LEMD2Q8NC56 503 aa10.89□□□□□ -0.67
ATG4B-211ENST00000429899 KIAA0895Q8NCT3 520 aa10.89□□□□□ -0.67
ATG4B-211ENST00000429899 SMG9Q9H0W8 520 aaKnown RBP10.89□□□□□ -0.67
ATG4B-211ENST00000429899 PRORYQ9H606 182 aa10.89□□□□□ -0.67
ATG4B-211ENST00000429899 CBX8Q9HC52 389 aa10.89□□□□□ -0.67
ATG4B-211ENST00000429899 HPS4Q9NQG7 708 aa10.89□□□□□ -0.67
ATG4B-211ENST00000429899 EXOC1Q9NV70 894 aa10.89□□□□□ -0.67
ATG4B-211ENST00000429899 DKK4Q9UBT3 224 aa10.89□□□□□ -0.67
ATG4B-211ENST00000429899 FBXL5Q9UKA1 691 aa10.89□□□□□ -0.67
ATG4B-211ENST00000429899 GDAQ9Y2T3 454 aa10.89□□□□□ -0.67
ATG4B-211ENST00000429899 TP53BP1Q12888 1972 aaPredicted RBP10.88□□□□□ -0.67
ATG4B-211ENST00000429899 DOPEY2Q9Y3R5 2298 aa10.88□□□□□ -0.67
ATG4B-211ENST00000429899 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.88□□□□□ -0.67
ATG4B-211ENST00000429899 GOLGA6L3A6NEY3 463 aa10.88□□□□□ -0.67
ATG4B-211ENST00000429899 ANTXRLA6NF34 631 aa10.88□□□□□ -0.67
ATG4B-211ENST00000429899 SH3BP5O60239 455 aa10.88□□□□□ -0.67
ATG4B-211ENST00000429899 VNN2O95498 520 aa10.88□□□□□ -0.67
ATG4B-211ENST00000429899 PTGER3P43115 390 aa10.88□□□□□ -0.67
ATG4B-211ENST00000429899 GALK1P51570 392 aa10.88□□□□□ -0.67
ATG4B-211ENST00000429899 POU5F1BQ06416 359 aa10.88□□□□□ -0.67
ATG4B-211ENST00000429899 SOX4Q06945 474 aaPredicted RBP10.88□□□□□ -0.67
ATG4B-211ENST00000429899 MRPL58Q14197 206 aaKnown RBP10.88□□□□□ -0.67
ATG4B-211ENST00000429899 MXD4Q14582 209 aaPredicted RBP10.88□□□□□ -0.67
ATG4B-211ENST00000429899 IQCB1Q15051 598 aa10.88□□□□□ -0.67
ATG4B-211ENST00000429899 TRIM68Q6AZZ1 485 aa10.88□□□□□ -0.67
ATG4B-211ENST00000429899 SLC23A3Q6PIS1 610 aa10.88□□□□□ -0.67
ATG4B-211ENST00000429899 PADI6Q6TGC4 694 aa10.88□□□□□ -0.67
ATG4B-211ENST00000429899 RNF19BQ6ZMZ0 732 aa10.88□□□□□ -0.67
ATG4B-211ENST00000429899 GAREM2Q75VX8 874 aa10.88□□□□□ -0.67
ATG4B-211ENST00000429899 SYT12Q8IV01 421 aa10.88□□□□□ -0.67
ATG4B-211ENST00000429899 SMYD4Q8IYR2 804 aaPredicted RBP10.88□□□□□ -0.67
ATG4B-211ENST00000429899 TMEFF1Q8IYR6 380 aa10.88□□□□□ -0.67
ATG4B-211ENST00000429899 DAW1Q8N136 415 aa10.88□□□□□ -0.67
ATG4B-211ENST00000429899 MINDY1Q8N5J2 469 aa10.88□□□□□ -0.67
ATG4B-211ENST00000429899 FRMD1Q8N878 549 aa10.88□□□□□ -0.67
ATG4B-211ENST00000429899 TSTD1Q8NFU3 115 aa10.88□□□□□ -0.67
ATG4B-211ENST00000429899 BPIFB1Q8TDL5 484 aa10.88□□□□□ -0.67
ATG4B-211ENST00000429899 FCRL3Q96P31 734 aaPredicted RBP10.88□□□□□ -0.67
ATG4B-211ENST00000429899 PPP1R10Q96QC0 940 aaKnown RBP10.88□□□□□ -0.67
ATG4B-211ENST00000429899 FGFBP2Q9BYJ0 223 aa10.88□□□□□ -0.67
ATG4B-211ENST00000429899 CRISPLD1Q9H336 500 aa10.88□□□□□ -0.67
ATG4B-211ENST00000429899 GKN1Q9NS71 199 aa10.88□□□□□ -0.67
ATG4B-211ENST00000429899 ODF2LQ9ULJ1 636 aa10.88□□□□□ -0.67
ATG4B-211ENST00000429899 USP20Q9Y2K6 914 aa10.88□□□□□ -0.67
ATG4B-211ENST00000429899 COL5A1P20908 1838 aaPredicted RBP10.87□□□□□ -0.67
ATG4B-211ENST00000429899 TRABD2BA6NFA1 517 aa10.87□□□□□ -0.67
ATG4B-211ENST00000429899 PPP1R3GB7ZBB8 358 aa10.87□□□□□ -0.67
ATG4B-211ENST00000429899 USO1O60763 962 aaKnown RBP10.87□□□□□ -0.67
ATG4B-211ENST00000429899 GLRA2P23416 452 aa10.87□□□□□ -0.67
ATG4B-211ENST00000429899 ZNF165P49910 485 aa10.87□□□□□ -0.67
ATG4B-211ENST00000429899 STK4Q13043 487 aa10.87□□□□□ -0.67
ATG4B-211ENST00000429899 PSMD2Q13200 908 aa10.87□□□□□ -0.67
ATG4B-211ENST00000429899 NCAPHQ15003 741 aa10.87□□□□□ -0.67
ATG4B-211ENST00000429899 XKR9Q5GH70 373 aa10.87□□□□□ -0.67
ATG4B-211ENST00000429899 FAM26FQ5R3K3 315 aa10.87□□□□□ -0.67
ATG4B-211ENST00000429899 TPGS2Q68CL5 300 aa10.87□□□□□ -0.67
ATG4B-211ENST00000429899 ANO7Q6IWH7 933 aa10.87□□□□□ -0.67
ATG4B-211ENST00000429899 TOGARAM2Q6ZUX3 1019 aa10.87□□□□□ -0.67
ATG4B-211ENST00000429899 SLCO6A1Q86UG4 719 aa10.87□□□□□ -0.67
ATG4B-211ENST00000429899 TTC30AQ86WT1 665 aa10.87□□□□□ -0.67
ATG4B-211ENST00000429899 DHX40Q8IX18 779 aaKnown RBP10.87□□□□□ -0.67
ATG4B-211ENST00000429899 CCDC65Q8IXS2 484 aa10.87□□□□□ -0.67
ATG4B-211ENST00000429899 EXOC8Q8IYI6 725 aa10.87□□□□□ -0.67
ATG4B-211ENST00000429899 FAM181AQ8N9Y4 354 aa10.87□□□□□ -0.67
ATG4B-211ENST00000429899 RNF214Q8ND24 703 aa10.87□□□□□ -0.67
ATG4B-211ENST00000429899 RLN3Q8WXF3 142 aa10.87□□□□□ -0.67
ATG4B-211ENST00000429899 HPS3Q969F9 1004 aa10.87□□□□□ -0.67
ATG4B-211ENST00000429899 MED15Q96RN5 788 aa10.87□□□□□ -0.67
ATG4B-211ENST00000429899 FIZ1Q96SL8 496 aa10.87□□□□□ -0.67
ATG4B-211ENST00000429899 ARID3AQ99856 593 aa10.87□□□□□ -0.67
ATG4B-211ENST00000429899 FAM83CQ9BQN1 747 aa10.87□□□□□ -0.67
ATG4B-211ENST00000429899 TIPINQ9BVW5 301 aa10.87□□□□□ -0.67
ATG4B-211ENST00000429899 NFKBIZQ9BYH8 718 aa10.87□□□□□ -0.67
ATG4B-211ENST00000429899 GTPBP4Q9BZE4 634 aaKnown RBP10.87□□□□□ -0.67
ATG4B-211ENST00000429899 EBF3Q9H4W6 596 aa10.87□□□□□ -0.67
ATG4B-211ENST00000429899 PDZD7Q9H5P4 517 aa10.87□□□□□ -0.67
ATG4B-211ENST00000429899 GRPEL1Q9HAV7 217 aa10.87□□□□□ -0.67
ATG4B-211ENST00000429899 POLMQ9NP87 494 aaPredicted RBP10.87□□□□□ -0.67
ATG4B-211ENST00000429899 OLFML3Q9NRN5 406 aa10.87□□□□□ -0.67
ATG4B-211ENST00000429899 PANK4Q9NVE7 773 aa10.87□□□□□ -0.67
ATG4B-211ENST00000429899 APOBEC2Q9Y235 224 aaKnown RBP10.87□□□□□ -0.67
ATG4B-211ENST00000429899 YIPF1Q9Y548 306 aa10.87□□□□□ -0.67
ATG4B-211ENST00000429899 TNFRSF10BO14763 440 aa10.86□□□□□ -0.67
ATG4B-211ENST00000429899 IKBKBO14920 756 aa10.86□□□□□ -0.67
ATG4B-211ENST00000429899 TRAPPC3O43617 180 aa10.86□□□□□ -0.67
ATG4B-211ENST00000429899 HIP1RO75146 1068 aa10.86□□□□□ -0.67
ATG4B-211ENST00000429899 TBCAO75347 108 aaKnown RBP10.86□□□□□ -0.67
ATG4B-211ENST00000429899 EDN1P05305 212 aa10.86□□□□□ -0.67
ATG4B-211ENST00000429899 KRT18P05783 430 aaKnown RBP10.86□□□□□ -0.67
ATG4B-211ENST00000429899 IDEP14735 1019 aa10.86□□□□□ -0.67
ATG4B-211ENST00000429899 GAP43P17677 238 aa10.86□□□□□ -0.67
ATG4B-211ENST00000429899 ERCC5P28715 1186 aaPredicted RBP10.86□□□□□ -0.67
ATG4B-211ENST00000429899 ARL2P36404 184 aa10.86□□□□□ -0.67
ATG4B-211ENST00000429899 PLCB2Q00722 1185 aa10.86□□□□□ -0.67
ATG4B-211ENST00000429899 GFPT1Q06210 699 aaPredicted RBP10.86□□□□□ -0.67
ATG4B-211ENST00000429899 RAD51AP2Q09MP3 1159 aa10.86□□□□□ -0.67
ATG4B-211ENST00000429899 RUNX3Q13761 415 aa10.86□□□□□ -0.67
ATG4B-211ENST00000429899 TFDP1Q14186 410 aa10.86□□□□□ -0.67
ATG4B-211ENST00000429899 CT47A1Q5JQC4 288 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms