RNA–Protein interactions for RNA: ENST00000428730.5

RHBDF1-204, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 5

Gene RHBDF1, Length 2,751 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-204ENST00000428730 UFL1O94874 794 aa17.16■□□□□ 0.34
RHBDF1-204ENST00000428730 ATP6V1B1P15313 513 aa17.16■□□□□ 0.34
RHBDF1-204ENST00000428730 CPOXP36551 454 aa17.16■□□□□ 0.34
RHBDF1-204ENST00000428730 PRELPP51888 382 aa17.16■□□□□ 0.34
RHBDF1-204ENST00000428730 TBL3Q12788 808 aaKnown RBP17.16■□□□□ 0.34
RHBDF1-204ENST00000428730 CCNIQ14094 377 aa17.16■□□□□ 0.34
RHBDF1-204ENST00000428730 EFHC1Q5JVL4 640 aa17.16■□□□□ 0.34
RHBDF1-204ENST00000428730 KRT39Q6A163 491 aa17.16■□□□□ 0.34
RHBDF1-204ENST00000428730 PADI6Q6TGC4 694 aa17.16■□□□□ 0.34
RHBDF1-204ENST00000428730 DGCR14Q96DF8 476 aaKnown RBP17.16■□□□□ 0.34
RHBDF1-204ENST00000428730 RILPQ96NA2 401 aa17.16■□□□□ 0.34
RHBDF1-204ENST00000428730 CCDC106Q9BWC9 280 aa17.16■□□□□ 0.34
RHBDF1-204ENST00000428730 GRIP2Q9C0E4 1043 aa17.16■□□□□ 0.34
RHBDF1-204ENST00000428730 C20orf27Q9GZN8 174 aa17.16■□□□□ 0.34
RHBDF1-204ENST00000428730 DNAJB4Q9UDY4 337 aa17.16■□□□□ 0.34
RHBDF1-204ENST00000428730 GMEB1Q9Y692 573 aa17.16■□□□□ 0.34
RHBDF1-204ENST00000428730 TFAP2AP05549 437 aa17.15■□□□□ 0.34
RHBDF1-204ENST00000428730 PCSK6P29122 969 aa17.15■□□□□ 0.34
RHBDF1-204ENST00000428730 PHBP35232 272 aa17.15■□□□□ 0.34
RHBDF1-204ENST00000428730 RGS2P41220 211 aa17.15■□□□□ 0.34
RHBDF1-204ENST00000428730 RPL7AP62424 266 aaKnown RBP17.15■□□□□ 0.34
RHBDF1-204ENST00000428730 GPSM2P81274 684 aa17.15■□□□□ 0.34
RHBDF1-204ENST00000428730 TMPRSS15P98073 1019 aa17.15■□□□□ 0.34
RHBDF1-204ENST00000428730 BTKQ06187 659 aa17.15■□□□□ 0.34
RHBDF1-204ENST00000428730 MAMLD1Q13495 774 aa17.15■□□□□ 0.34
RHBDF1-204ENST00000428730 SNRNP35Q16560 246 aaKnown RBP17.15■□□□□ 0.34
RHBDF1-204ENST00000428730 DNAL1Q4LDG9 190 aa17.15■□□□□ 0.34
RHBDF1-204ENST00000428730 MON1BQ7L1V2 547 aa17.15■□□□□ 0.34
RHBDF1-204ENST00000428730 PALM2Q8IXS6 379 aa17.15■□□□□ 0.34
RHBDF1-204ENST00000428730 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.15■□□□□ 0.34
RHBDF1-204ENST00000428730 MIPOL1Q8TD10 442 aa17.15■□□□□ 0.34
RHBDF1-204ENST00000428730 CPT1BQ92523 772 aa17.15■□□□□ 0.34
RHBDF1-204ENST00000428730 GPRC5CQ9NQ84 441 aa17.15■□□□□ 0.34
RHBDF1-204ENST00000428730 IVNS1ABPQ9Y6Y0 642 aa17.15■□□□□ 0.34
RHBDF1-204ENST00000428730 GAKO14976 1311 aa17.15■□□□□ 0.34
RHBDF1-204ENST00000428730 CAPN8A6NHC0 703 aa17.15■□□□□ 0.34
RHBDF1-204ENST00000428730 TLR3O15455 904 aaKnown RBP17.15■□□□□ 0.34
RHBDF1-204ENST00000428730 FKBP6O75344 327 aa17.15■□□□□ 0.34
RHBDF1-204ENST00000428730 TMEM63AO94886 807 aa17.15■□□□□ 0.34
RHBDF1-204ENST00000428730 CDK4P11802 303 aa17.15■□□□□ 0.34
RHBDF1-204ENST00000428730 PEX6Q13608 980 aa17.15■□□□□ 0.34
RHBDF1-204ENST00000428730 GK3PQ14409 553 aa17.15■□□□□ 0.34
RHBDF1-204ENST00000428730 OASLQ15646 514 aaKnown RBP17.15■□□□□ 0.34
RHBDF1-204ENST00000428730 GRAMD1BQ3KR37 738 aa17.15■□□□□ 0.34
RHBDF1-204ENST00000428730 NADK2Q4G0N4 442 aa17.15■□□□□ 0.34
RHBDF1-204ENST00000428730 CEP70Q8NHQ1 597 aa17.15■□□□□ 0.34
RHBDF1-204ENST00000428730 ALKBH8Q96BT7 664 aaKnown RBP17.15■□□□□ 0.34
RHBDF1-204ENST00000428730 ACCSQ96QU6 501 aa17.15■□□□□ 0.34
RHBDF1-204ENST00000428730 KIFC3Q9BVG8 833 aa17.15■□□□□ 0.34
RHBDF1-204ENST00000428730 CYP4F11Q9HBI6 524 aa17.15■□□□□ 0.34
RHBDF1-204ENST00000428730 RAB20Q9NX57 234 aa17.15■□□□□ 0.34
RHBDF1-204ENST00000428730 KCNK4Q9NYG8 393 aa17.15■□□□□ 0.34
RHBDF1-204ENST00000428730 ZNF232Q9UNY5 417 aa17.15■□□□□ 0.34
RHBDF1-204ENST00000428730 FARP1Q9Y4F1 1045 aaPredicted RBP17.15■□□□□ 0.34
RHBDF1-204ENST00000428730 SMCHD1A6NHR9 2005 aa17.15■□□□□ 0.34
RHBDF1-204ENST00000428730 SLC16A4O15374 487 aa17.14■□□□□ 0.33
RHBDF1-204ENST00000428730 HNRNPCP07910 306 aaKnown RBP eCLIP17.14■□□□□ 0.33
RHBDF1-204ENST00000428730 GTF2H1P32780 548 aa17.14■□□□□ 0.33
RHBDF1-204ENST00000428730 VCPP55072 806 aaKnown RBP17.14■□□□□ 0.33
RHBDF1-204ENST00000428730 FOLH1Q04609 750 aa17.14■□□□□ 0.33
RHBDF1-204ENST00000428730 HIC1Q14526 733 aa17.14■□□□□ 0.33
RHBDF1-204ENST00000428730 TLR1Q15399 786 aa17.14■□□□□ 0.33
RHBDF1-204ENST00000428730 KLHL38Q2WGJ6 581 aa17.14■□□□□ 0.33
RHBDF1-204ENST00000428730 ANKRD20A4Q4UJ75 823 aa17.14■□□□□ 0.33
RHBDF1-204ENST00000428730 LMBRD2Q68DH5 695 aaPredicted RBP17.14■□□□□ 0.33
RHBDF1-204ENST00000428730 SRPK1Q96SB4 655 aaKnown RBP17.14■□□□□ 0.33
RHBDF1-204ENST00000428730 PPCSQ9HAB8 311 aa17.14■□□□□ 0.33
RHBDF1-204ENST00000428730 PIM1P11309 404 aaPredicted RBP17.14■□□□□ 0.33
RHBDF1-204ENST00000428730 ZNF200P98182 395 aaPredicted RBP17.14■□□□□ 0.33
RHBDF1-204ENST00000428730 MYBPC2Q14324 1141 aa17.14■□□□□ 0.33
RHBDF1-204ENST00000428730 KBTBD12Q3ZCT8 623 aa17.14■□□□□ 0.33
RHBDF1-204ENST00000428730 B3GNT6Q6ZMB0 384 aa17.14■□□□□ 0.33
RHBDF1-204ENST00000428730 ZCCHC23Q6ZST2 131 aa17.14■□□□□ 0.33
RHBDF1-204ENST00000428730 SH2D5Q6ZV89 423 aa17.14■□□□□ 0.33
RHBDF1-204ENST00000428730 CCDC166P0CW27 439 aa17.13■□□□□ 0.33
RHBDF1-204ENST00000428730 ARP10275 920 aa17.13■□□□□ 0.33
RHBDF1-204ENST00000428730 SERPINB6P35237 376 aa17.13■□□□□ 0.33
RHBDF1-204ENST00000428730 GPC3P51654 580 aa17.13■□□□□ 0.33
RHBDF1-204ENST00000428730 CHI3L2Q15782 390 aa17.13■□□□□ 0.33
RHBDF1-204ENST00000428730 TCHHL1Q5QJ38 904 aaPredicted RBP17.13■□□□□ 0.33
RHBDF1-204ENST00000428730 TMC7Q7Z402 723 aa17.13■□□□□ 0.33
RHBDF1-204ENST00000428730 TRIM42Q8IWZ5 723 aa17.13■□□□□ 0.33
RHBDF1-204ENST00000428730 ZFPM1Q8IX07 1006 aa17.13■□□□□ 0.33
RHBDF1-204ENST00000428730 FBXL13Q8NEE6 735 aa17.13■□□□□ 0.33
RHBDF1-204ENST00000428730 TMEM206Q9H813 350 aa17.13■□□□□ 0.33
RHBDF1-204ENST00000428730 UBAP1Q9NZ09 502 aa17.13■□□□□ 0.33
RHBDF1-204ENST00000428730 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.13■□□□□ 0.33
RHBDF1-204ENST00000428730 KAT6AQ92794 2004 aa17.13■□□□□ 0.33
RHBDF1-204ENST00000428730 I3L4J1 428 aa17.13■□□□□ 0.33
RHBDF1-204ENST00000428730 CFBP00751 764 aa17.13■□□□□ 0.33
RHBDF1-204ENST00000428730 FOSP01100 380 aaPredicted RBP17.13■□□□□ 0.33
RHBDF1-204ENST00000428730 RAG1P15918 1043 aa17.13■□□□□ 0.33
RHBDF1-204ENST00000428730 ADARP55265 1226 aaKnown RBP17.13■□□□□ 0.33
RHBDF1-204ENST00000428730 SH2D4BQ5SQS7 431 aa17.13■□□□□ 0.33
RHBDF1-204ENST00000428730 KYAT3Q6YP21 454 aaKnown RBP17.13■□□□□ 0.33
RHBDF1-204ENST00000428730 ZFP28Q8NHY6 868 aa17.13■□□□□ 0.33
RHBDF1-204ENST00000428730 NYXQ9GZU5 481 aa17.13■□□□□ 0.33
RHBDF1-204ENST00000428730 POLIQ9UNA4 740 aa17.13■□□□□ 0.33
RHBDF1-204ENST00000428730 HEMK1Q9Y5R4 338 aaPredicted RBP17.13■□□□□ 0.33
RHBDF1-204ENST00000428730 NFASCO94856 1347 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms