RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 SLC18A2Q05940 514 aa16.8■□□□□ 0.28
C9orf3-206ENST00000428313 DEPDC1Q5TB30 811 aa16.8■□□□□ 0.28
C9orf3-206ENST00000428313 DCDC5Q6ZRR9 648 aa16.8■□□□□ 0.28
C9orf3-206ENST00000428313 LPCAT2Q7L5N7 544 aa16.8■□□□□ 0.28
C9orf3-206ENST00000428313 GSTA5Q7RTV2 222 aa16.8■□□□□ 0.28
C9orf3-206ENST00000428313 PQLC1Q8N2U9 271 aa16.8■□□□□ 0.28
C9orf3-206ENST00000428313 GJA10Q969M2 543 aa16.8■□□□□ 0.28
C9orf3-206ENST00000428313 C12orf65Q9H3J6 166 aaKnown RBP16.8■□□□□ 0.28
C9orf3-206ENST00000428313 ACSS3Q9H6R3 686 aa16.8■□□□□ 0.28
C9orf3-206ENST00000428313 MTMR7Q9Y216 660 aa16.8■□□□□ 0.28
C9orf3-206ENST00000428313 TAF1LQ8IZX4 1826 aa16.79■□□□□ 0.28
C9orf3-206ENST00000428313 COL5A2P05997 1499 aaPredicted RBP16.79■□□□□ 0.28
C9orf3-206ENST00000428313 MED24O75448 989 aa16.79■□□□□ 0.28
C9orf3-206ENST00000428313 OCM2P0CE71 109 aa16.79■□□□□ 0.28
C9orf3-206ENST00000428313 OCMP0CE72 109 aaPredicted RBP16.79■□□□□ 0.28
C9orf3-206ENST00000428313 THRAP10827 490 aa16.79■□□□□ 0.28
C9orf3-206ENST00000428313 POLD1P28340 1107 aa16.79■□□□□ 0.28
C9orf3-206ENST00000428313 RXRGP48443 463 aa16.79■□□□□ 0.28
C9orf3-206ENST00000428313 GPX6P59796 221 aa16.79■□□□□ 0.28
C9orf3-206ENST00000428313 RARS2Q5T160 578 aaKnown RBP16.79■□□□□ 0.28
C9orf3-206ENST00000428313 NIPAL1Q6NVV3 410 aa16.79■□□□□ 0.28
C9orf3-206ENST00000428313 PPP1R18Q6NYC8 613 aa16.79■□□□□ 0.28
C9orf3-206ENST00000428313 OGFOD1Q8N543 542 aa16.79■□□□□ 0.28
C9orf3-206ENST00000428313 CCDC33Q8N5R6 958 aa16.79■□□□□ 0.28
C9orf3-206ENST00000428313 SHKBP1Q8TBC3 707 aa16.79■□□□□ 0.28
C9orf3-206ENST00000428313 EPS8L1Q8TE68 723 aa16.79■□□□□ 0.28
C9orf3-206ENST00000428313 DCAKDQ8WVC6 231 aa16.79■□□□□ 0.28
C9orf3-206ENST00000428313 TTC17Q96AE7 1141 aa16.79■□□□□ 0.28
C9orf3-206ENST00000428313 RUSC1Q9BVN2 902 aa16.79■□□□□ 0.28
C9orf3-206ENST00000428313 TUT1Q9H6E5 874 aaKnown RBP16.79■□□□□ 0.28
C9orf3-206ENST00000428313 RIOX1Q9H6W3 641 aa16.79■□□□□ 0.28
C9orf3-206ENST00000428313 ACP6Q9NPH0 428 aa16.79■□□□□ 0.28
C9orf3-206ENST00000428313 OLFML3Q9NRN5 406 aa16.79■□□□□ 0.28
C9orf3-206ENST00000428313 MCM9Q9NXL9 1143 aa16.79■□□□□ 0.28
C9orf3-206ENST00000428313 CDH22Q9UJ99 828 aa16.79■□□□□ 0.28
C9orf3-206ENST00000428313 ASTN2O75129 1339 aaPredicted RBP16.79■□□□□ 0.28
C9orf3-206ENST00000428313 MEI4A8MW99 385 aa16.79■□□□□ 0.28
C9orf3-206ENST00000428313 IPO5O00410 1097 aaKnown RBP16.79■□□□□ 0.28
C9orf3-206ENST00000428313 TBC1D12O60347 775 aa16.79■□□□□ 0.28
C9orf3-206ENST00000428313 MT-ND3P03897 115 aa16.79■□□□□ 0.28
C9orf3-206ENST00000428313 PRDX6P30041 224 aa16.79■□□□□ 0.28
C9orf3-206ENST00000428313 MECOMQ03112 1051 aa16.79■□□□□ 0.28
C9orf3-206ENST00000428313 KCNC4Q03721 635 aa16.79■□□□□ 0.28
C9orf3-206ENST00000428313 CHRNDQ07001 517 aa16.79■□□□□ 0.28
C9orf3-206ENST00000428313 ATG16L1Q676U5 607 aa16.79■□□□□ 0.28
C9orf3-206ENST00000428313 CAPN12Q6ZSI9 719 aa16.79■□□□□ 0.28
C9orf3-206ENST00000428313 DNAJC10Q8IXB1 793 aa16.79■□□□□ 0.28
C9orf3-206ENST00000428313 CNBD2Q96M20 576 aa16.79■□□□□ 0.28
C9orf3-206ENST00000428313 FAM111AQ96PZ2 611 aa16.79■□□□□ 0.28
C9orf3-206ENST00000428313 HEPHQ9BQS7 1158 aa16.79■□□□□ 0.28
C9orf3-206ENST00000428313 SMYD3Q9H7B4 428 aa16.79■□□□□ 0.28
C9orf3-206ENST00000428313 UBE2TQ9NPD8 197 aaPredicted RBP16.79■□□□□ 0.28
C9orf3-206ENST00000428313 ITGA11Q9UKX5 1188 aa16.79■□□□□ 0.28
C9orf3-206ENST00000428313 POMPQ9Y244 141 aa16.79■□□□□ 0.28
C9orf3-206ENST00000428313 RALAP11233 206 aa16.78■□□□□ 0.28
C9orf3-206ENST00000428313 GAP43P17677 238 aa16.78■□□□□ 0.28
C9orf3-206ENST00000428313 NFKBIAP25963 317 aa16.78■□□□□ 0.28
C9orf3-206ENST00000428313 HMOX2P30519 316 aa16.78■□□□□ 0.28
C9orf3-206ENST00000428313 ALDH18A1P54886 795 aaKnown RBP16.78■□□□□ 0.28
C9orf3-206ENST00000428313 SLC25A3Q00325 362 aa16.78■□□□□ 0.28
C9orf3-206ENST00000428313 IYDQ6PHW0 289 aa16.78■□□□□ 0.28
C9orf3-206ENST00000428313 PPM1KQ8N3J5 372 aa16.78■□□□□ 0.28
C9orf3-206ENST00000428313 POU5F2Q8N7G0 328 aa16.78■□□□□ 0.28
C9orf3-206ENST00000428313 CABLES1Q8TDN4 633 aa16.78■□□□□ 0.28
C9orf3-206ENST00000428313 PPP4R1Q8TF05 950 aa16.78■□□□□ 0.28
C9orf3-206ENST00000428313 SRPK1Q96SB4 655 aaKnown RBP16.78■□□□□ 0.28
C9orf3-206ENST00000428313 ARPC5LQ9BPX5 153 aa16.78■□□□□ 0.28
C9orf3-206ENST00000428313 SLC2A11Q9BYW1 496 aa16.78■□□□□ 0.28
C9orf3-206ENST00000428313 ADAM33Q9BZ11 813 aa16.78■□□□□ 0.28
C9orf3-206ENST00000428313 ZNF287Q9HBT7 754 aa16.78■□□□□ 0.28
C9orf3-206ENST00000428313 PCDHGB4Q9UN71 923 aa16.78■□□□□ 0.28
C9orf3-206ENST00000428313 GIT1Q9Y2X7 761 aa16.78■□□□□ 0.28
C9orf3-206ENST00000428313 PCDHGB5Q9Y5G0 923 aa16.78■□□□□ 0.28
C9orf3-206ENST00000428313 CLUHO75153 1309 aa16.78■□□□□ 0.28
C9orf3-206ENST00000428313 GOLGA8RI6L899 631 aa16.77■□□□□ 0.28
C9orf3-206ENST00000428313 ZNF701M0R085 212 aaPredicted RBP16.77■□□□□ 0.28
C9orf3-206ENST00000428313 C6orf222P0C671 652 aaPredicted RBP16.77■□□□□ 0.28
C9orf3-206ENST00000428313 USP17L8P0C7I0 530 aa16.77■□□□□ 0.28
C9orf3-206ENST00000428313 FDX1P10109 184 aa16.77■□□□□ 0.28
C9orf3-206ENST00000428313 ACAT1P24752 427 aaKnown RBP16.77■□□□□ 0.28
C9orf3-206ENST00000428313 MAPK4P31152 587 aa16.77■□□□□ 0.28
C9orf3-206ENST00000428313 ZNF829Q3KNS6 432 aaPredicted RBP16.77■□□□□ 0.28
C9orf3-206ENST00000428313 POTEGQ6S5H5 508 aa16.77■□□□□ 0.28
C9orf3-206ENST00000428313 TICAM1Q8IUC6 712 aa16.77■□□□□ 0.28
C9orf3-206ENST00000428313 ADCY4Q8NFM4 1077 aa16.77■□□□□ 0.28
C9orf3-206ENST00000428313 DNM3Q9UQ16 869 aa16.77■□□□□ 0.28
C9orf3-206ENST00000428313 CLEC11AQ9Y240 323 aa16.77■□□□□ 0.28
C9orf3-206ENST00000428313 FRMD4BQ9Y2L6 1034 aa16.77■□□□□ 0.28
C9orf3-206ENST00000428313 UBE4BO95155 1302 aa16.77■□□□□ 0.28
C9orf3-206ENST00000428313 IQANK1A0A1B0GTG1 560 aa16.77■□□□□ 0.27
C9orf3-206ENST00000428313 DENND3A2RUS2 1198 aa16.77■□□□□ 0.27
C9orf3-206ENST00000428313 SDR42E2A6NKP2 422 aa16.77■□□□□ 0.27
C9orf3-206ENST00000428313 TBCAO75347 108 aaKnown RBP16.77■□□□□ 0.27
C9orf3-206ENST00000428313 OXSR1O95747 527 aaPredicted RBP16.77■□□□□ 0.27
C9orf3-206ENST00000428313 TRIM49P0CI25 452 aa16.77■□□□□ 0.27
C9orf3-206ENST00000428313 TRIM49CP0CI26 452 aa16.77■□□□□ 0.27
C9orf3-206ENST00000428313 CLK2P49760 499 aaKnown RBP16.77■□□□□ 0.27
C9orf3-206ENST00000428313 RNASEH2BQ5TBB1 312 aaKnown RBP16.77■□□□□ 0.27
C9orf3-206ENST00000428313 DRICH1Q6PGQ1 229 aaPredicted RBP16.77■□□□□ 0.27
C9orf3-206ENST00000428313 NSMFQ6X4W1 530 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms