RNA–Protein interactions for RNA: ENST00000427391.2

FIRRE-201, Transcript of firre intergenic repeating RNA element, humanhuman

TSL 2 BASIC

Gene FIRRE, Length 2,926 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIRRE-201ENST00000427391 KLC4Q9NSK0 619 aa12.21□□□□□ -0.45
FIRRE-201ENST00000427391 GPATCH2LQ9NWQ4 482 aa12.21□□□□□ -0.45
FIRRE-201ENST00000427391 TNFSF13BQ9Y275 285 aa12.21□□□□□ -0.45
FIRRE-201ENST00000427391 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.21□□□□□ -0.46
FIRRE-201ENST00000427391 PPEF2O14830 753 aa12.21□□□□□ -0.46
FIRRE-201ENST00000427391 HBP1O60381 514 aa12.21□□□□□ -0.46
FIRRE-201ENST00000427391 LGALS2P05162 132 aa12.21□□□□□ -0.46
FIRRE-201ENST00000427391 KDELR1P24390 212 aa12.21□□□□□ -0.46
FIRRE-201ENST00000427391 MNAT1P51948 309 aa12.21□□□□□ -0.46
FIRRE-201ENST00000427391 GPX6P59796 221 aa12.21□□□□□ -0.46
FIRRE-201ENST00000427391 ARHGAP1Q07960 439 aa12.21□□□□□ -0.46
FIRRE-201ENST00000427391 STAT4Q14765 748 aa12.21□□□□□ -0.46
FIRRE-201ENST00000427391 TRPM8Q7Z2W7 1104 aa12.21□□□□□ -0.46
FIRRE-201ENST00000427391 ZC3H18Q86VM9 953 aaKnown RBP12.21□□□□□ -0.46
FIRRE-201ENST00000427391 RFX6Q8HWS3 928 aa12.21□□□□□ -0.46
FIRRE-201ENST00000427391 ANKS4BQ8N8V4 417 aa12.21□□□□□ -0.46
FIRRE-201ENST00000427391 BBOF1Q8ND07 529 aa12.21□□□□□ -0.46
FIRRE-201ENST00000427391 ZNF518BQ9C0D4 1074 aa12.21□□□□□ -0.46
FIRRE-201ENST00000427391 LGALS13Q9UHV8 139 aa12.21□□□□□ -0.46
FIRRE-201ENST00000427391 PNMA3Q9UL41 463 aa12.21□□□□□ -0.46
FIRRE-201ENST00000427391 GRID1Q9ULK0 1009 aa12.21□□□□□ -0.46
FIRRE-201ENST00000427391 SPDYE5A6NIY4 337 aa12.2□□□□□ -0.46
FIRRE-201ENST00000427391 HCRTO43612 131 aa12.2□□□□□ -0.46
FIRRE-201ENST00000427391 CILPO75339 1184 aa12.2□□□□□ -0.46
FIRRE-201ENST00000427391 SLC25A27O95847 323 aa12.2□□□□□ -0.46
FIRRE-201ENST00000427391 RPL22P35268 128 aaKnown RBP12.2□□□□□ -0.46
FIRRE-201ENST00000427391 ADCYAP1R1P41586 468 aa12.2□□□□□ -0.46
FIRRE-201ENST00000427391 SURF1Q15526 300 aa12.2□□□□□ -0.46
FIRRE-201ENST00000427391 LACTB2Q53H82 288 aaPredicted RBP12.2□□□□□ -0.46
FIRRE-201ENST00000427391 ANKRD13AQ8IZ07 590 aa12.2□□□□□ -0.46
FIRRE-201ENST00000427391 FUKQ8N0W3 1084 aa12.2□□□□□ -0.46
FIRRE-201ENST00000427391 NIPA2Q8N8Q9 360 aa12.2□□□□□ -0.46
FIRRE-201ENST00000427391 KCTD6Q8NC69 237 aa12.2□□□□□ -0.46
FIRRE-201ENST00000427391 CPT1BQ92523 772 aa12.2□□□□□ -0.46
FIRRE-201ENST00000427391 NKD2Q969F2 451 aaPredicted RBP12.2□□□□□ -0.46
FIRRE-201ENST00000427391 RMDN2Q96LZ7 410 aa12.2□□□□□ -0.46
FIRRE-201ENST00000427391 KLF6Q99612 283 aaPredicted RBP12.2□□□□□ -0.46
FIRRE-201ENST00000427391 BRCA2P51587 3418 aa12.2□□□□□ -0.46
FIRRE-201ENST00000427391 CLUHO75153 1309 aa12.2□□□□□ -0.46
FIRRE-201ENST00000427391 KAT6AQ92794 2004 aa12.2□□□□□ -0.46
FIRRE-201ENST00000427391 TCEA3O75764 348 aa12.2□□□□□ -0.46
FIRRE-201ENST00000427391 TMEM63AO94886 807 aa12.2□□□□□ -0.46
FIRRE-201ENST00000427391 KRT15P19012 456 aa12.2□□□□□ -0.46
FIRRE-201ENST00000427391 GCLCP48506 637 aaPredicted RBP12.2□□□□□ -0.46
FIRRE-201ENST00000427391 NDST1P52848 882 aa12.2□□□□□ -0.46
FIRRE-201ENST00000427391 ATP11AP98196 1134 aa12.2□□□□□ -0.46
FIRRE-201ENST00000427391 LMNB2Q03252 620 aa12.2□□□□□ -0.46
FIRRE-201ENST00000427391 MYO1EQ12965 1108 aa12.2□□□□□ -0.46
FIRRE-201ENST00000427391 TTLL4Q14679 1199 aa12.2□□□□□ -0.46
FIRRE-201ENST00000427391 CCDC33Q8N5R6 958 aa12.2□□□□□ -0.46
FIRRE-201ENST00000427391 TMEM176AQ96HP8 235 aa12.2□□□□□ -0.46
FIRRE-201ENST00000427391 HPDLQ96IR7 371 aa12.2□□□□□ -0.46
FIRRE-201ENST00000427391 CFAP57Q96MR6 1250 aa12.2□□□□□ -0.46
FIRRE-201ENST00000427391 CCDC77Q9BR77 488 aa12.2□□□□□ -0.46
FIRRE-201ENST00000427391 ACTR5Q9H9F9 607 aaPredicted RBP12.2□□□□□ -0.46
FIRRE-201ENST00000427391 SLCO1B3Q9NPD5 702 aa12.2□□□□□ -0.46
FIRRE-201ENST00000427391 USP15Q9Y4E8 981 aaPredicted RBP12.2□□□□□ -0.46
FIRRE-201ENST00000427391 TRIP11Q15643 1979 aa12.19□□□□□ -0.46
FIRRE-201ENST00000427391 E5RJQ4 531 aa12.19□□□□□ -0.46
FIRRE-201ENST00000427391 OAS1P00973 400 aaKnown RBP12.19□□□□□ -0.46
FIRRE-201ENST00000427391 ITGAVP06756 1048 aa12.19□□□□□ -0.46
FIRRE-201ENST00000427391 GPD2P43304 727 aa12.19□□□□□ -0.46
FIRRE-201ENST00000427391 MGAT5Q09328 741 aa12.19□□□□□ -0.46
FIRRE-201ENST00000427391 ICE2Q659A1 982 aa12.19□□□□□ -0.46
FIRRE-201ENST00000427391 CYB5D1Q6P9G0 228 aa12.19□□□□□ -0.46
FIRRE-201ENST00000427391 DRICH1Q6PGQ1 229 aaPredicted RBP12.19□□□□□ -0.46
FIRRE-201ENST00000427391 TBC1D1Q86TI0 1168 aaPredicted RBP12.19□□□□□ -0.46
FIRRE-201ENST00000427391 TRABD2AQ86V40 505 aa12.19□□□□□ -0.46
FIRRE-201ENST00000427391 NLRP7Q8WX94 980 aa12.19□□□□□ -0.46
FIRRE-201ENST00000427391 KDM4CQ9H3R0 1056 aa12.19□□□□□ -0.46
FIRRE-201ENST00000427391 PCDH9Q9HC56 1237 aa12.19□□□□□ -0.46
FIRRE-201ENST00000427391 DDX56Q9NY93 547 aaKnown RBP12.19□□□□□ -0.46
FIRRE-201ENST00000427391 NKIRAS1Q9NYS0 192 aa12.19□□□□□ -0.46
FIRRE-201ENST00000427391 ERAP1Q9NZ08 941 aa12.19□□□□□ -0.46
FIRRE-201ENST00000427391 TRIM33Q9UPN9 1127 aa12.19□□□□□ -0.46
FIRRE-201ENST00000427391 DRG1Q9Y295 367 aaKnown RBP12.19□□□□□ -0.46
FIRRE-201ENST00000427391 HES2Q9Y543 173 aa12.19□□□□□ -0.46
FIRRE-201ENST00000427391 GOLGA8RI6L899 631 aa12.19□□□□□ -0.46
FIRRE-201ENST00000427391 GAS2O43903 313 aaKnown RBP12.19□□□□□ -0.46
FIRRE-201ENST00000427391 ATP5DP30049 168 aa12.19□□□□□ -0.46
FIRRE-201ENST00000427391 RPA3P35244 121 aaPredicted RBP12.19□□□□□ -0.46
FIRRE-201ENST00000427391 DNAJC3Q13217 504 aa12.19□□□□□ -0.46
FIRRE-201ENST00000427391 BBS9Q3SYG4 887 aa12.19□□□□□ -0.46
FIRRE-201ENST00000427391 OR6B2Q6IFH4 312 aa12.19□□□□□ -0.46
FIRRE-201ENST00000427391 ADPGKQ9BRR6 497 aa12.19□□□□□ -0.46
FIRRE-201ENST00000427391 MAGEB5Q9BZ81 275 aa12.19□□□□□ -0.46
FIRRE-201ENST00000427391 NSRP1Q9H0G5 558 aaKnown RBP12.19□□□□□ -0.46
FIRRE-201ENST00000427391 TRABDQ9H4I3 376 aa12.19□□□□□ -0.46
FIRRE-201ENST00000427391 FAM49BQ9NUQ9 324 aa12.19□□□□□ -0.46
FIRRE-201ENST00000427391 STRIP2Q9ULQ0 834 aa12.19□□□□□ -0.46
FIRRE-201ENST00000427391 USP18Q9UMW8 372 aa12.19□□□□□ -0.46
FIRRE-201ENST00000427391 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.19□□□□□ -0.462e-6■■■■■ 55.4
FIRRE-201ENST00000427391 CXCL11O14625 94 aa12.18□□□□□ -0.46
FIRRE-201ENST00000427391 TAC1P20366 129 aa12.18□□□□□ -0.46
FIRRE-201ENST00000427391 PHKA2P46019 1235 aa12.18□□□□□ -0.46
FIRRE-201ENST00000427391 COPS2P61201 443 aa12.18□□□□□ -0.46
FIRRE-201ENST00000427391 BASP1P80723 227 aaKnown RBP12.18□□□□□ -0.46
FIRRE-201ENST00000427391 ITIH4Q14624 930 aa12.18□□□□□ -0.46
FIRRE-201ENST00000427391 MORF4L2Q15014 288 aa12.18□□□□□ -0.46
FIRRE-201ENST00000427391 HIF1AQ16665 826 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms