RNA–Protein interactions for RNA: ENST00000427076.5

POLR2J4-202, Transcript of RNA polymerase II subunit J4, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene POLR2J4, Length 6,466 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J4-202ENST00000427076 RAD51CO43502 376 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 PBLDP30039 288 aaPredicted RBP11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 LRPAP1P30533 357 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 GUCA1AP43080 201 aaPredicted RBP11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 ITGA8P53708 1063 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 RAD23AP54725 363 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 NUDT18Q6ZVK8 323 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 C3orf20Q8ND61 904 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 IL17REQ8NFR9 667 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 RSPH1Q8WYR4 309 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 ARHGEF26Q96DR7 871 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 OTUD5Q96G74 571 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 FAM111AQ96PZ2 611 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 HOXC10Q9NYD6 342 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 C2CD2Q9Y426 696 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 SNX8Q9Y5X2 465 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 KRT36O76013 467 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 TTLL4Q14679 1199 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 KPNB1Q14974 876 aaKnown RBP11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 EXD1Q8NHP7 514 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 CEP44Q9C0F1 390 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 RIBC2Q9H4K1 309 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 KRCC1Q9NPI7 259 aaPredicted RBP11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 RNF181Q9P0P0 153 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 UVRAGQ9P2Y5 699 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 CTTNBP2Q8WZ74 1663 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 CNOT3O75175 753 aaKnown RBP11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 RTN2O75298 545 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 IL6P05231 212 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 PDGFRBP09619 1106 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 IFNAR1P17181 557 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 GPC1P35052 558 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 MAGEA4P43358 317 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 PPIDQ08752 370 aaKnown RBP11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 CNTN1Q12860 1018 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 USF2Q15853 346 aaPredicted RBP11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 VPS37AQ8NEZ2 397 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 GOLPH3Q9H4A6 298 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 KLHL3Q9UH77 587 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 RNF123Q5XPI4 1314 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 WDR19Q8NEZ3 1342 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 PRAMEF22A3QJZ6 481 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 CYBBP04839 570 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 ATP4AP20648 1035 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 IRAK1P51617 712 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 SCRN3Q0VDG4 424 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 LRIG3Q6UXM1 1119 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 ATG16L2Q8NAA4 619 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 SCFD2Q8WU76 684 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 MASTLQ96GX5 879 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 KLHL4Q9C0H6 718 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 KCTD10Q9H3F6 313 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 TMCC3Q9ULS5 477 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 SMIM31A0A1B0GVY4 71 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 CENPXA8MT69 81 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 PRLP01236 227 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 PTPN12Q05209 780 aaKnown RBP11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 TXNRD1Q16881 649 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 ARMC6Q6NXE6 501 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 RASSF6Q6ZTQ3 369 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 GPD1LQ8N335 351 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 POMGNT2Q8NAT1 580 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 KIAA1586Q9HCI6 787 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 ABCB10Q9NRK6 738 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 KCNH4Q9UQ05 1017 aa11.78□□□□□ -0.52
POLR2J4-202ENST00000427076 SH3D21A4FU49 640 aa11.77□□□□□ -0.52
POLR2J4-202ENST00000427076 FOXN3O00409 490 aaPredicted RBP11.77□□□□□ -0.52
POLR2J4-202ENST00000427076 GRK3P35626 688 aa11.77□□□□□ -0.52
POLR2J4-202ENST00000427076 EIF2S3P41091 472 aaKnown RBP11.77□□□□□ -0.52
POLR2J4-202ENST00000427076 MCCD1P59942 119 aaPredicted RBP11.77□□□□□ -0.52
POLR2J4-202ENST00000427076 GRAPQ13588 217 aa11.77□□□□□ -0.52
POLR2J4-202ENST00000427076 DGKDQ16760 1214 aa11.77□□□□□ -0.52
POLR2J4-202ENST00000427076 GRAPLQ8TC17 118 aaPredicted RBP11.77□□□□□ -0.52
POLR2J4-202ENST00000427076 FAM167AQ96KS9 214 aa11.77□□□□□ -0.52
POLR2J4-202ENST00000427076 UBXN6Q9BZV1 441 aa11.77□□□□□ -0.52
POLR2J4-202ENST00000427076 VCPKMTQ9H867 229 aa11.77□□□□□ -0.52
POLR2J4-202ENST00000427076 CYP4F12Q9HCS2 524 aa11.77□□□□□ -0.52
POLR2J4-202ENST00000427076 ABCC10Q5T3U5 1492 aa11.77□□□□□ -0.52
POLR2J4-202ENST00000427076 BCL10O95999 233 aa11.77□□□□□ -0.53
POLR2J4-202ENST00000427076 PDHA2P29803 388 aa11.77□□□□□ -0.53
POLR2J4-202ENST00000427076 KCNJ6P48051 423 aa11.77□□□□□ -0.53
POLR2J4-202ENST00000427076 GLRBP48167 497 aa11.77□□□□□ -0.53
POLR2J4-202ENST00000427076 EPS8Q12929 822 aa11.77□□□□□ -0.53
POLR2J4-202ENST00000427076 TRIM65Q6PJ69 517 aa11.77□□□□□ -0.53
POLR2J4-202ENST00000427076 PROM2Q8N271 834 aa11.77□□□□□ -0.53
POLR2J4-202ENST00000427076 PLEKHG4BQ96PX9 1271 aa11.77□□□□□ -0.53
POLR2J4-202ENST00000427076 CHP1Q99653 195 aa11.77□□□□□ -0.53
POLR2J4-202ENST00000427076 PDCD10Q9BUL8 212 aa11.77□□□□□ -0.53
POLR2J4-202ENST00000427076 TRIM62Q9BVG3 475 aa11.77□□□□□ -0.53
POLR2J4-202ENST00000427076 ZNF224Q9NZL3 707 aa11.77□□□□□ -0.53
POLR2J4-202ENST00000427076 PHTF1Q9UMS5 762 aa11.77□□□□□ -0.53
POLR2J4-202ENST00000427076 SNX12Q9UMY4 172 aa11.77□□□□□ -0.53
POLR2J4-202ENST00000427076 SH3GLB1Q9Y371 365 aa11.77□□□□□ -0.53
POLR2J4-202ENST00000427076 FAM196BA6NMK8 535 aa11.77□□□□□ -0.53
POLR2J4-202ENST00000427076 CDH16O75309 829 aa11.77□□□□□ -0.53
POLR2J4-202ENST00000427076 SERPINB8P50452 374 aa11.77□□□□□ -0.53
POLR2J4-202ENST00000427076 SERPINB9P50453 376 aa11.77□□□□□ -0.53
POLR2J4-202ENST00000427076 ST8SIA6P61647 398 aa11.77□□□□□ -0.53
POLR2J4-202ENST00000427076 CUL4AQ13619 759 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms