RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 TWNKQ96RR1 684 aa15.07■□□□□ 0
ERCC3-202ENST00000426778 PCYT2Q99447 389 aa15.07■□□□□ 0
ERCC3-202ENST00000426778 SMG5Q9UPR3 1016 aaKnown RBP15.07■□□□□ 0
ERCC3-202ENST00000426778 FARP1Q9Y4F1 1045 aaPredicted RBP15.07■□□□□ 0
ERCC3-202ENST00000426778 STYXL1Q9Y6J8 313 aa15.07■□□□□ 0
ERCC3-202ENST00000426778 SPATA31C2B4DYI2 1134 aa15.06■□□□□ 0
ERCC3-202ENST00000426778 ARL2P36404 184 aa15.06■□□□□ 0
ERCC3-202ENST00000426778 MAP3K10Q02779 954 aa15.06■□□□□ 0
ERCC3-202ENST00000426778 SLC25A11Q02978 314 aaKnown RBP15.06■□□□□ 0
ERCC3-202ENST00000426778 FAAP100Q0VG06 881 aa15.06■□□□□ 0
ERCC3-202ENST00000426778 KBTBD12Q3ZCT8 623 aa15.06■□□□□ 0
ERCC3-202ENST00000426778 CIAPIN1Q6FI81 312 aa15.06■□□□□ 0
ERCC3-202ENST00000426778 PRPF39Q86UA1 669 aaKnown RBP15.06■□□□□ 0
ERCC3-202ENST00000426778 CTAGE3PQ8IX95 158 aa15.06■□□□□ 0
ERCC3-202ENST00000426778 RTKN2Q8IZC4 609 aa15.06■□□□□ 0
ERCC3-202ENST00000426778 REPS2Q8NFH8 660 aa15.06■□□□□ 0
ERCC3-202ENST00000426778 RDM1Q8NG50 284 aa15.06■□□□□ 0
ERCC3-202ENST00000426778 UBA3Q8TBC4 463 aa15.06■□□□□ 0
ERCC3-202ENST00000426778 PIWIL1Q96J94 861 aaKnown RBP15.06■□□□□ 0
ERCC3-202ENST00000426778 NLRP4Q96MN2 994 aa15.06■□□□□ 0
ERCC3-202ENST00000426778 RAB3IPQ96QF0 476 aaPredicted RBP15.06■□□□□ 0
ERCC3-202ENST00000426778 GPATCH2LQ9NWQ4 482 aa15.06■□□□□ 0
ERCC3-202ENST00000426778 MARCOQ9UEW3 520 aaPredicted RBP15.06■□□□□ 0
ERCC3-202ENST00000426778 MYO18AQ92614 2054 aaKnown RBP15.06■□□□□ 0
ERCC3-202ENST00000426778 E5RJQ4 531 aa15.06■□□□□ 0
ERCC3-202ENST00000426778 TOP3BO95985 862 aaKnown RBP15.06■□□□□ 0
ERCC3-202ENST00000426778 ITGAVP06756 1048 aa15.06■□□□□ 0
ERCC3-202ENST00000426778 KITP10721 976 aa15.06■□□□□ 0
ERCC3-202ENST00000426778 RBP3P10745 1247 aa15.06■□□□□ 0
ERCC3-202ENST00000426778 PYGBP11216 843 aa15.06■□□□□ 0
ERCC3-202ENST00000426778 ARL4CP56559 192 aa15.06■□□□□ 0
ERCC3-202ENST00000426778 EIF3EP60228 445 aaKnown RBP15.06■□□□□ 0
ERCC3-202ENST00000426778 CRYMQ14894 314 aa15.06■□□□□ 0
ERCC3-202ENST00000426778 LY6KQ17RY6 165 aa15.06■□□□□ 0
ERCC3-202ENST00000426778 NBPF20Q3BBV1 942 aa15.06■□□□□ 0
ERCC3-202ENST00000426778 GNPTABQ3T906 1256 aa15.06■□□□□ 0
ERCC3-202ENST00000426778 EFHC2Q5JST6 749 aa15.06■□□□□ 0
ERCC3-202ENST00000426778 CLNKQ7Z7G1 428 aa15.06■□□□□ 0
ERCC3-202ENST00000426778 FAXDC2Q96IV6 333 aa15.06■□□□□ 0
ERCC3-202ENST00000426778 NIF3L1Q9GZT8 377 aa15.06■□□□□ 0
ERCC3-202ENST00000426778 NR2E3Q9Y5X4 410 aa15.06■□□□□ 0
ERCC3-202ENST00000426778 KBTBD13C9JR72 458 aa15.06■□□□□ 0
ERCC3-202ENST00000426778 MAGEB2O15479 319 aa15.06■□□□□ 0
ERCC3-202ENST00000426778 DCTN3O75935 186 aa15.06■□□□□ 0
ERCC3-202ENST00000426778 ERBB2P04626 1255 aa15.06■□□□□ 0
ERCC3-202ENST00000426778 KCNA3P22001 575 aa15.06■□□□□ 0
ERCC3-202ENST00000426778 KDELR1P24390 212 aa15.06■□□□□ 0
ERCC3-202ENST00000426778 ZBTB16Q05516 673 aa15.06■□□□□ 0
ERCC3-202ENST00000426778 KHDC1Q4VXA5 237 aaKnown RBP15.06■□□□□ 0
ERCC3-202ENST00000426778 PPP1R15BQ5SWA1 713 aa15.06■□□□□ 0
ERCC3-202ENST00000426778 SLFN12LQ6IEE8 588 aa15.06■□□□□ 0
ERCC3-202ENST00000426778 RPAINQ86UA6 219 aa15.06■□□□□ 0
ERCC3-202ENST00000426778 PPIL6Q8IXY8 311 aa15.06■□□□□ 0
ERCC3-202ENST00000426778 NAT8LQ8N9F0 302 aa15.06■□□□□ 0
ERCC3-202ENST00000426778 ATP11CQ8NB49 1132 aa15.06■□□□□ 0
ERCC3-202ENST00000426778 ZNF280CQ8ND82 737 aa15.06■□□□□ 0
ERCC3-202ENST00000426778 AGBL3Q8NEM8 1001 aa15.06■□□□□ 0
ERCC3-202ENST00000426778 SPATA18Q8TC71 538 aa15.06■□□□□ 0
ERCC3-202ENST00000426778 ZBED3Q96IU2 234 aaPredicted RBP15.06■□□□□ 0
ERCC3-202ENST00000426778 MANSC1Q9H8J5 431 aa15.06■□□□□ 0
ERCC3-202ENST00000426778 RNPEPL1Q9HAU8 725 aa15.06■□□□□ 0
ERCC3-202ENST00000426778 SHOC2Q9UQ13 582 aa15.06■□□□□ 0
ERCC3-202ENST00000426778 UGT1A9O60656 530 aa15.05■□□□□ 0
ERCC3-202ENST00000426778 LPXNO60711 386 aa15.05■□□□□ 0
ERCC3-202ENST00000426778 TPBGLP0DKB5 382 aa15.05■□□□□ 0
ERCC3-202ENST00000426778 UBA1P22314 1058 aaKnown RBP15.05■□□□□ 0
ERCC3-202ENST00000426778 RTP1P59025 263 aa15.05■□□□□ 0
ERCC3-202ENST00000426778 IRX4P78413 519 aa15.05■□□□□ 0
ERCC3-202ENST00000426778 PTK7Q13308 1070 aa15.05■□□□□ 0
ERCC3-202ENST00000426778 BMPR2Q13873 1038 aa15.05■□□□□ 0
ERCC3-202ENST00000426778 PIGHQ14442 188 aaPredicted RBP15.05■□□□□ 0
ERCC3-202ENST00000426778 C15orf59Q2T9L4 293 aaPredicted RBP15.05■□□□□ 0
ERCC3-202ENST00000426778 CDHR3Q6ZTQ4 885 aa15.05■□□□□ 0
ERCC3-202ENST00000426778 DCAKDQ8WVC6 231 aa15.05■□□□□ 0
ERCC3-202ENST00000426778 NKD2Q969F2 451 aaPredicted RBP15.05■□□□□ 0
ERCC3-202ENST00000426778 UGT1A7Q9HAW7 530 aa15.05■□□□□ 0
ERCC3-202ENST00000426778 UGT1A10Q9HAW8 530 aa15.05■□□□□ 0
ERCC3-202ENST00000426778 UGT1A8Q9HAW9 530 aa15.05■□□□□ 0
ERCC3-202ENST00000426778 DKC1O60832 514 aaKnown RBP eCLIP15.05■□□□□ -0
ERCC3-202ENST00000426778 CXCL8P10145 99 aa15.05■□□□□ -0
ERCC3-202ENST00000426778 MIPP30301 263 aa15.05■□□□□ -0
ERCC3-202ENST00000426778 ASPAP45381 313 aa15.05■□□□□ -0
ERCC3-202ENST00000426778 CCDC15Q0P6D6 951 aa15.05■□□□□ -0
ERCC3-202ENST00000426778 FYB2Q5VWT5 728 aa15.05■□□□□ -0
ERCC3-202ENST00000426778 EEF1DP3Q658K8 133 aa15.05■□□□□ -0
ERCC3-202ENST00000426778 TDRPQ86YL5 185 aa15.05■□□□□ -0
ERCC3-202ENST00000426778 BRSK2Q8IWQ3 736 aa15.05■□□□□ -0
ERCC3-202ENST00000426778 MICALL2Q8IY33 904 aa15.05■□□□□ -0
ERCC3-202ENST00000426778 ZNF276Q8N554 614 aa15.05■□□□□ -0
ERCC3-202ENST00000426778 NETO2Q8NC67 525 aa15.05■□□□□ -0
ERCC3-202ENST00000426778 NAF1Q96HR8 494 aaKnown RBP15.05■□□□□ -0
ERCC3-202ENST00000426778 SLC13A1Q9BZW2 595 aa15.05■□□□□ -0
ERCC3-202ENST00000426778 SMYD3Q9H7B4 428 aa15.05■□□□□ -0
ERCC3-202ENST00000426778 ACAD9Q9H845 621 aa15.05■□□□□ -0
ERCC3-202ENST00000426778 MAP3K20Q9NYL2 800 aaKnown RBP15.05■□□□□ -0
ERCC3-202ENST00000426778 CNTN6Q9UQ52 1028 aa15.05■□□□□ -0
ERCC3-202ENST00000426778 DRG1Q9Y295 367 aaKnown RBP15.05■□□□□ -0
ERCC3-202ENST00000426778 HEY1Q9Y5J3 304 aa15.05■□□□□ -0
ERCC3-202ENST00000426778 MAFBQ9Y5Q3 323 aaPredicted RBP15.05■□□□□ -0
ERCC3-202ENST00000426778 SNCAIPQ9Y6H5 919 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms