RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 SYNGAP1Q96PV0 1343 aa16.73■□□□□ 0.27
PKP4-205ENST00000426248 MAGEB2O15479 319 aa16.72■□□□□ 0.27
PKP4-205ENST00000426248 WFS1O76024 890 aa16.72■□□□□ 0.27
PKP4-205ENST00000426248 LYPLA2O95372 231 aa16.72■□□□□ 0.27
PKP4-205ENST00000426248 RARBP10826 455 aa16.72■□□□□ 0.27
PKP4-205ENST00000426248 GNAZP19086 355 aa16.72■□□□□ 0.27
PKP4-205ENST00000426248 CTNNA2P26232 953 aa16.72■□□□□ 0.27
PKP4-205ENST00000426248 HOXD10P28358 340 aa16.72■□□□□ 0.27
PKP4-205ENST00000426248 ICAM3P32942 547 aa16.72■□□□□ 0.27
PKP4-205ENST00000426248 YARSP54577 528 aaKnown RBP16.72■□□□□ 0.27
PKP4-205ENST00000426248 SLC34A1Q06495 639 aa16.72■□□□□ 0.27
PKP4-205ENST00000426248 NOGQ13253 232 aa16.72■□□□□ 0.27
PKP4-205ENST00000426248 KYNUQ16719 465 aa16.72■□□□□ 0.27
PKP4-205ENST00000426248 MDH1BQ5I0G3 518 aa16.72■□□□□ 0.27
PKP4-205ENST00000426248 HP1BP3Q5SSJ5 553 aaPredicted RBP16.72■□□□□ 0.27
PKP4-205ENST00000426248 ZNF184Q99676 751 aaPredicted RBP16.72■□□□□ 0.27
PKP4-205ENST00000426248 ALG13Q9NP73 1137 aaKnown RBP16.72■□□□□ 0.27
PKP4-205ENST00000426248 SLCO1B3Q9NPD5 702 aa16.72■□□□□ 0.27
PKP4-205ENST00000426248 NDE1Q9NXR1 346 aa16.72■□□□□ 0.27
PKP4-205ENST00000426248 PHTF1Q9UMS5 762 aa16.72■□□□□ 0.27
PKP4-205ENST00000426248 PCDHB4Q9Y5E5 795 aa16.72■□□□□ 0.27
PKP4-205ENST00000426248 TLR2O60603 784 aa16.72■□□□□ 0.27
PKP4-205ENST00000426248 PGM3O95394 542 aa16.72■□□□□ 0.27
PKP4-205ENST00000426248 OVGP1Q12889 678 aa16.72■□□□□ 0.27
PKP4-205ENST00000426248 KCTD21Q4G0X4 260 aa16.72■□□□□ 0.27
PKP4-205ENST00000426248 MTDHQ86UE4 582 aaKnown RBP16.72■□□□□ 0.27
PKP4-205ENST00000426248 CAPNS2Q96L46 248 aa16.72■□□□□ 0.27
PKP4-205ENST00000426248 MYH7BA7E2Y1 1941 aa16.72■□□□□ 0.27
PKP4-205ENST00000426248 SOCS7O14512 581 aa16.72■□□□□ 0.27
PKP4-205ENST00000426248 PAX3P23760 479 aa16.72■□□□□ 0.27
PKP4-205ENST00000426248 WASHC2DQ5SRD0 308 aa16.72■□□□□ 0.27
PKP4-205ENST00000426248 GSDMBQ8TAX9 411 aa16.72■□□□□ 0.27
PKP4-205ENST00000426248 SPATA16Q9BXB7 569 aa16.72■□□□□ 0.27
PKP4-205ENST00000426248 PHF24Q9UPV7 400 aa16.72■□□□□ 0.27
PKP4-205ENST00000426248 SPOPO43791 374 aa16.72■□□□□ 0.27
PKP4-205ENST00000426248 LYNP07948 512 aa16.72■□□□□ 0.27
PKP4-205ENST00000426248 ATP6V1B1P15313 513 aa16.72■□□□□ 0.27
PKP4-205ENST00000426248 GJA8P48165 433 aa16.72■□□□□ 0.27
PKP4-205ENST00000426248 OR52E8Q6IFG1 317 aa16.72■□□□□ 0.27
PKP4-205ENST00000426248 ARHGAP24Q8N264 748 aa16.72■□□□□ 0.27
PKP4-205ENST00000426248 NPLOC4Q8TAT6 608 aa16.72■□□□□ 0.27
PKP4-205ENST00000426248 PTPRN2Q92932 1015 aa16.72■□□□□ 0.27
PKP4-205ENST00000426248 SLC35C1Q96A29 364 aa16.72■□□□□ 0.27
PKP4-205ENST00000426248 MKNK1Q9BUB5 465 aa16.72■□□□□ 0.27
PKP4-205ENST00000426248 HAUS5O94927 633 aa16.71■□□□□ 0.27
PKP4-205ENST00000426248 GM2AP17900 193 aa16.71■□□□□ 0.27
PKP4-205ENST00000426248 ATF7IP2Q5U623 682 aa16.71■□□□□ 0.27
PKP4-205ENST00000426248 IQSEC1Q6DN90 963 aa16.71■□□□□ 0.27
PKP4-205ENST00000426248 TWF2Q6IBS0 349 aaKnown RBP16.71■□□□□ 0.27
PKP4-205ENST00000426248 FBXL13Q8NEE6 735 aa16.71■□□□□ 0.27
PKP4-205ENST00000426248 BAP1Q92560 729 aa16.71■□□□□ 0.27
PKP4-205ENST00000426248 SPOCK2Q92563 424 aa16.71■□□□□ 0.27
PKP4-205ENST00000426248 KIAA1586Q9HCI6 787 aa16.71■□□□□ 0.27
PKP4-205ENST00000426248 XPNPEP1Q9NQW7 623 aa16.71■□□□□ 0.27
PKP4-205ENST00000426248 ZNF180Q9UJW8 692 aa16.71■□□□□ 0.27
PKP4-205ENST00000426248 GOLGA4Q13439 2230 aaKnown RBP16.71■□□□□ 0.27
PKP4-205ENST00000426248 SSTR3P32745 418 aaPredicted RBP16.71■□□□□ 0.27
PKP4-205ENST00000426248 SLC26A2P50443 739 aa16.71■□□□□ 0.27
PKP4-205ENST00000426248 DLG4P78352 724 aa16.71■□□□□ 0.27
PKP4-205ENST00000426248 LIN52Q52LA3 116 aa16.71■□□□□ 0.27
PKP4-205ENST00000426248 UBAP2Q5T6F2 1119 aaKnown RBP16.71■□□□□ 0.27
PKP4-205ENST00000426248 CCDC137Q6PK04 289 aaKnown RBP16.71■□□□□ 0.27
PKP4-205ENST00000426248 DSTYKQ6XUX3 929 aa16.71■□□□□ 0.27
PKP4-205ENST00000426248 NANOGNBQ7Z5D8 188 aa16.71■□□□□ 0.27
PKP4-205ENST00000426248 TPCN2Q8NHX9 752 aa16.71■□□□□ 0.27
PKP4-205ENST00000426248 ANKRD36BP1Q96IX9 119 aa16.71■□□□□ 0.27
PKP4-205ENST00000426248 PHF12Q96QT6 1004 aa16.71■□□□□ 0.27
PKP4-205ENST00000426248 MAF1Q9H063 256 aa16.71■□□□□ 0.27
PKP4-205ENST00000426248 UBE4BO95155 1302 aa16.71■□□□□ 0.26
PKP4-205ENST00000426248 ELNP15502 786 aa16.71■□□□□ 0.26
PKP4-205ENST00000426248 GRIK4Q16099 956 aa16.71■□□□□ 0.26
PKP4-205ENST00000426248 RSPH3Q86UC2 560 aa16.71■□□□□ 0.26
PKP4-205ENST00000426248 C4orf33Q8N1A6 199 aa16.71■□□□□ 0.26
PKP4-205ENST00000426248 GCOM2Q9BZD3 368 aaPredicted RBP16.71■□□□□ 0.26
PKP4-205ENST00000426248 OSGEPQ9NPF4 335 aa16.71■□□□□ 0.26
PKP4-205ENST00000426248 RIPK2O43353 540 aa16.7■□□□□ 0.26
PKP4-205ENST00000426248 PON1P27169 355 aa16.7■□□□□ 0.26
PKP4-205ENST00000426248 MAPK7Q13164 816 aa16.7■□□□□ 0.26
PKP4-205ENST00000426248 AADACL2Q6P093 401 aa16.7■□□□□ 0.26
PKP4-205ENST00000426248 UTP4Q969X6 686 aaKnown RBP16.7■□□□□ 0.26
PKP4-205ENST00000426248 ALDH1A1P00352 501 aa16.7■□□□□ 0.26
PKP4-205ENST00000426248 PGM1P36871 562 aa16.7■□□□□ 0.26
PKP4-205ENST00000426248 CPT1AP50416 773 aa16.7■□□□□ 0.26
PKP4-205ENST00000426248 CYLC2Q14093 348 aaPredicted RBP16.7■□□□□ 0.26
PKP4-205ENST00000426248 ARHGEF6Q15052 776 aa16.7■□□□□ 0.26
PKP4-205ENST00000426248 CXCL17Q6UXB2 119 aa16.7■□□□□ 0.26
PKP4-205ENST00000426248 TRIM67Q6ZTA4 783 aa16.7■□□□□ 0.26
PKP4-205ENST00000426248 CPB2Q96IY4 423 aa16.7■□□□□ 0.26
PKP4-205ENST00000426248 TUBGCP5Q96RT8 1024 aa16.7■□□□□ 0.26
PKP4-205ENST00000426248 ADCY3O60266 1144 aa16.7■□□□□ 0.26
PKP4-205ENST00000426248 PDE5AO76074 875 aa16.7■□□□□ 0.26
PKP4-205ENST00000426248 STK10O94804 968 aaKnown RBP16.7■□□□□ 0.26
PKP4-205ENST00000426248 SMPD1P17405 629 aa16.7■□□□□ 0.26
PKP4-205ENST00000426248 MLH1P40692 756 aa16.7■□□□□ 0.26
PKP4-205ENST00000426248 NEK3P51956 506 aa16.7■□□□□ 0.26
PKP4-205ENST00000426248 HTRA3P83110 453 aa16.7■□□□□ 0.26
PKP4-205ENST00000426248 GRAMD1BQ3KR37 738 aa16.7■□□□□ 0.26
PKP4-205ENST00000426248 GLYCTKQ8IVS8 523 aa16.7■□□□□ 0.26
PKP4-205ENST00000426248 SLC25A41Q8N5S1 370 aa16.7■□□□□ 0.26
PKP4-205ENST00000426248 UBL4BQ8N7F7 174 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms