RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 PTK7Q13308 1070 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 MDH1BQ5I0G3 518 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 TTC7BQ86TV6 843 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 FAM83AQ86UY5 434 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 THNSL1Q8IYQ7 743 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 BANPQ8N9N5 519 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 FLAD1Q8NFF5 587 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 CFAP36Q96G28 342 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 BTBD10Q9BSF8 475 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 PPP1R12CQ9BZL4 782 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 IQCGQ9H095 443 aaKnown RBP7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 DCLRE1BQ9H816 532 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 CYLDQ9NQC7 956 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 ZNF302Q9NR11 478 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.88□□□□□ -1.152e-6■□□□□ 9.4
SMARCC1-202ENST00000425518 FZD1Q9UP38 647 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 FARP1Q9Y4F1 1045 aaPredicted RBP7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 CNTNAP2Q9UHC6 1331 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 PIK3R2O00459 728 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 GSC2O15499 205 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 MAFGO15525 162 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 LRCH4O75427 683 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 FAM155BO75949 473 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 MAP3K6O95382 1288 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 ASS1P00966 412 aaKnown RBP7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 ATP4AP20648 1035 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 KDELR1P24390 212 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 GCLCP48506 637 aaPredicted RBP7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 MXRA7P84157 204 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 KBTBD12Q3ZCT8 623 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 PPP1R2P3Q6NXS1 205 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 DARS2Q6PI48 645 aaKnown RBP7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 NPNTQ6UXI9 565 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 KIAA0319LQ8IZA0 1049 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 PPM1NQ8N819 430 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 NAT8LQ8N9F0 302 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 SERAC1Q96JX3 654 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 CYTH2Q99418 400 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 WDR83Q9BRX9 315 aaKnown RBP7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 PORCNQ9H237 461 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 VPS11Q9H270 941 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 SAR1AQ9NR31 198 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 STOML1Q9UBI4 398 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 FAM237BA0A1B0GVD1 139 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 NVLO15381 856 aaKnown RBP7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 LINGO3P0C6S8 592 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 SUPT20HL2P0C7V6 817 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 KITP10721 976 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 MYL2P10916 166 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 RAP1GAPP47736 663 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 CDH8P55286 799 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 TGFB2P61812 414 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 GHRHRQ02643 423 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 CCDC142Q17RM4 750 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 GNPTABQ3T906 1256 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 SUPT20HL1Q3ZLR7 823 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 PTPN20Q4JDL3 420 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 CCDC62Q6P9F0 684 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 TMEM154Q6P9G4 183 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.88□□□□□ -1.152e-7■■■■■ 75
SMARCC1-202ENST00000425518 ANKRD31Q8N7Z5 1873 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 PDCD7Q8N8D1 485 aaKnown RBP7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 SPATA18Q8TC71 538 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 LRRN4Q8WUT4 740 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 DCAKDQ8WVC6 231 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 SLC13A1Q9BZW2 595 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 STYXL1Q9Y6J8 313 aa7.88□□□□□ -1.15
SMARCC1-202ENST00000425518 IQANK1A0A1B0GTG1 560 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 H7C0C1 242 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 CAPN9O14815 690 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 MCF2LO15068 1137 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 KRT7P08729 469 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 ATP6V1C1P21283 382 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 NAMPTP43490 491 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 ATP5OP48047 213 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 ZNF200P98182 395 aaPredicted RBP7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 MMRN1Q13201 1228 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 DPYSL3Q14195 570 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 DUOXA2Q1HG44 320 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 CTC1Q2NKJ3 1217 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 FAXCQ5TGI0 409 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 SNX30Q5VWJ9 437 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 C1orf228Q6PIY5 440 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 RINLQ6ZS11 566 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 TMEM130Q8N3G9 435 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 ARFGAP1Q8N6T3 406 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 TEX9Q8N6V9 391 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 TTC13Q8NBP0 860 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 STMN2Q93045 179 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 NIF3L1Q9GZT8 377 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 PPCSQ9HAB8 311 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 PPP1R1BQ9UD71 204 aaPredicted RBP7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 MARCOQ9UEW3 520 aaPredicted RBP7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 KCNG1Q9UIX4 513 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 POLIQ9UNA4 740 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 CNTN6Q9UQ52 1028 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 NRXN2Q9P2S2 1712 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 NFASCO94856 1347 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 CCDC195A0A1B0GUA6 201 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 KBTBD13C9JR72 458 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms