RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 MYRFLQ96LU7 910 aa17.29■□□□□ 0.36
COL18A1-205ENST00000423214 CUEDC2Q9H467 287 aa17.29■□□□□ 0.36
COL18A1-205ENST00000423214 KIAA1586Q9HCI6 787 aa17.29■□□□□ 0.36
COL18A1-205ENST00000423214 DUS2Q9NX74 493 aaKnown RBP17.29■□□□□ 0.36
COL18A1-205ENST00000423214 HSPBP1Q9NZL4 362 aa17.29■□□□□ 0.36
COL18A1-205ENST00000423214 MAGEC2Q9UBF1 373 aaPredicted RBP17.29■□□□□ 0.36
COL18A1-205ENST00000423214 CDH9Q9ULB4 789 aa17.29■□□□□ 0.36
COL18A1-205ENST00000423214 CACNA1BQ00975 2339 aa17.29■□□□□ 0.36
COL18A1-205ENST00000423214 CNOT1A5YKK6 2376 aaKnown RBP17.28■□□□□ 0.36
COL18A1-205ENST00000423214 OTOL1A6NHN0 477 aaPredicted RBP17.28■□□□□ 0.36
COL18A1-205ENST00000423214 GABRDO14764 452 aa17.28■□□□□ 0.36
COL18A1-205ENST00000423214 EIF3DO15371 548 aaKnown RBP eCLIP17.28■□□□□ 0.36
COL18A1-205ENST00000423214 RPP40O75818 363 aaKnown RBP17.28■□□□□ 0.36
COL18A1-205ENST00000423214 EGFP01133 1207 aa17.28■□□□□ 0.36
COL18A1-205ENST00000423214 ANXA13P27216 316 aa17.28■□□□□ 0.36
COL18A1-205ENST00000423214 MAGEA11P43364 429 aa17.28■□□□□ 0.36
COL18A1-205ENST00000423214 PXNP49023 591 aaPredicted RBP17.28■□□□□ 0.36
COL18A1-205ENST00000423214 PDE6CP51160 858 aa17.28■□□□□ 0.36
COL18A1-205ENST00000423214 AMPD3Q01432 767 aa17.28■□□□□ 0.36
COL18A1-205ENST00000423214 CYP27A1Q02318 531 aa17.28■□□□□ 0.36
COL18A1-205ENST00000423214 SCARA3Q6AZY7 606 aa17.28■□□□□ 0.36
COL18A1-205ENST00000423214 CBWD2Q8IUF1 395 aa17.28■□□□□ 0.36
COL18A1-205ENST00000423214 WDR49Q8IV35 697 aa17.28■□□□□ 0.36
COL18A1-205ENST00000423214 OR5B17Q8NGF7 314 aa17.28■□□□□ 0.36
COL18A1-205ENST00000423214 OSCP1Q8WVF1 389 aa17.28■□□□□ 0.36
COL18A1-205ENST00000423214 GAB3Q8WWW8 586 aa17.28■□□□□ 0.36
COL18A1-205ENST00000423214 HPS3Q969F9 1004 aa17.28■□□□□ 0.36
COL18A1-205ENST00000423214 MYLPFQ96A32 169 aa17.28■□□□□ 0.36
COL18A1-205ENST00000423214 DHX58Q96C10 678 aa17.28■□□□□ 0.36
COL18A1-205ENST00000423214 MMS19Q96T76 1030 aa17.28■□□□□ 0.36
COL18A1-205ENST00000423214 P2RY13Q9BPV8 354 aa17.28■□□□□ 0.36
COL18A1-205ENST00000423214 WNT6Q9Y6F9 365 aa17.28■□□□□ 0.36
COL18A1-205ENST00000423214 UBE4BO95155 1302 aa17.27■□□□□ 0.36
COL18A1-205ENST00000423214 CCDC163A0A0D9SF12 145 aa17.27■□□□□ 0.36
COL18A1-205ENST00000423214 SLC30A4O14863 429 aa17.27■□□□□ 0.36
COL18A1-205ENST00000423214 SPTLC2O15270 562 aa17.27■□□□□ 0.36
COL18A1-205ENST00000423214 KCNA4P22459 653 aa17.27■□□□□ 0.36
COL18A1-205ENST00000423214 HOXC13P31276 330 aa17.27■□□□□ 0.36
COL18A1-205ENST00000423214 GJA4P35212 333 aa17.27■□□□□ 0.36
COL18A1-205ENST00000423214 FBXO43Q4G163 708 aa17.27■□□□□ 0.36
COL18A1-205ENST00000423214 AASDHQ4L235 1098 aaPredicted RBP17.27■□□□□ 0.36
COL18A1-205ENST00000423214 FAM26FQ5R3K3 315 aa17.27■□□□□ 0.36
COL18A1-205ENST00000423214 VSTM1Q6UX27 236 aa17.27■□□□□ 0.36
COL18A1-205ENST00000423214 CACNA2D4Q7Z3S7 1137 aa17.27■□□□□ 0.36
COL18A1-205ENST00000423214 ARL14EPQ8N8R7 260 aaPredicted RBP17.27■□□□□ 0.36
COL18A1-205ENST00000423214 C12orf50Q8NA57 414 aaPredicted RBP17.27■□□□□ 0.36
COL18A1-205ENST00000423214 LINC00301Q8NCQ3 95 aa17.27■□□□□ 0.36
COL18A1-205ENST00000423214 GLIS3Q8NEA6 775 aa17.27■□□□□ 0.36
COL18A1-205ENST00000423214 KBTBD7Q8WVZ9 684 aa17.27■□□□□ 0.36
COL18A1-205ENST00000423214 CD101Q93033 1021 aa17.27■□□□□ 0.36
COL18A1-205ENST00000423214 ACDQ96AP0 544 aa17.27■□□□□ 0.36
COL18A1-205ENST00000423214 CHFRQ96EP1 664 aa17.27■□□□□ 0.36
COL18A1-205ENST00000423214 ZNF396Q96N95 335 aaPredicted RBP17.27■□□□□ 0.36
COL18A1-205ENST00000423214 FNBP1Q96RU3 617 aa17.27■□□□□ 0.36
COL18A1-205ENST00000423214 TRIM9Q9C026 710 aa17.27■□□□□ 0.36
COL18A1-205ENST00000423214 ECT2Q9H8V3 914 aa17.27■□□□□ 0.36
COL18A1-205ENST00000423214 ACACBO00763 2458 aa17.27■□□□□ 0.35
COL18A1-205ENST00000423214 C2orf78A6NCI8 922 aa17.26■□□□□ 0.35
COL18A1-205ENST00000423214 TRIM66O15016 1216 aa17.26■□□□□ 0.35
COL18A1-205ENST00000423214 ATP2C2O75185 946 aa17.26■□□□□ 0.35
COL18A1-205ENST00000423214 CLSTN1O94985 981 aa17.26■□□□□ 0.35
COL18A1-205ENST00000423214 DLATP10515 647 aaKnown RBP17.26■□□□□ 0.35
COL18A1-205ENST00000423214 WARSP23381 471 aaKnown RBP17.26■□□□□ 0.35
COL18A1-205ENST00000423214 GRIK1P39086 918 aa17.26■□□□□ 0.35
COL18A1-205ENST00000423214 NR1H3Q13133 447 aa17.26■□□□□ 0.35
COL18A1-205ENST00000423214 PSMD2Q13200 908 aa17.26■□□□□ 0.35
COL18A1-205ENST00000423214 SNRNP35Q16560 246 aaKnown RBP17.26■□□□□ 0.35
COL18A1-205ENST00000423214 FAM171BQ6P995 826 aa17.26■□□□□ 0.35
COL18A1-205ENST00000423214 CAMKK1Q8N5S9 505 aa17.26■□□□□ 0.35
COL18A1-205ENST00000423214 RPLP0P6Q8NHW5 317 aa17.26■□□□□ 0.35
COL18A1-205ENST00000423214 SH3RF2Q8TEC5 729 aa17.26■□□□□ 0.35
COL18A1-205ENST00000423214 SNX21Q969T3 373 aa17.26■□□□□ 0.35
COL18A1-205ENST00000423214 SPATA17Q96L03 361 aa17.26■□□□□ 0.35
COL18A1-205ENST00000423214 HHIPQ96QV1 700 aa17.26■□□□□ 0.35
COL18A1-205ENST00000423214 SLC22A12Q96S37 553 aa17.26■□□□□ 0.35
COL18A1-205ENST00000423214 CYP2S1Q96SQ9 504 aa17.26■□□□□ 0.35
COL18A1-205ENST00000423214 SNX25Q9H3E2 840 aa17.26■□□□□ 0.35
COL18A1-205ENST00000423214 KBTBD4Q9NVX7 518 aa17.26■□□□□ 0.35
COL18A1-205ENST00000423214 EHD2Q9NZN4 543 aa17.26■□□□□ 0.35
COL18A1-205ENST00000423214 AXIN1O15169 862 aa17.25■□□□□ 0.35
COL18A1-205ENST00000423214 PPP6R2O75170 966 aa17.25■□□□□ 0.35
COL18A1-205ENST00000423214 EPN2O95208 641 aa17.25■□□□□ 0.35
COL18A1-205ENST00000423214 NFATC1O95644 943 aa17.25■□□□□ 0.35
COL18A1-205ENST00000423214 PDGFRBP09619 1106 aa17.25■□□□□ 0.35
COL18A1-205ENST00000423214 TNNI1P19237 187 aa17.25■□□□□ 0.35
COL18A1-205ENST00000423214 BDNFP23560 247 aa17.25■□□□□ 0.35
COL18A1-205ENST00000423214 GALK1P51570 392 aa17.25■□□□□ 0.35
COL18A1-205ENST00000423214 CYP2J2P51589 502 aa17.25■□□□□ 0.35
COL18A1-205ENST00000423214 TNNC1P63316 161 aa17.25■□□□□ 0.35
COL18A1-205ENST00000423214 E2F4Q16254 413 aa17.25■□□□□ 0.35
COL18A1-205ENST00000423214 PPM1JQ5JR12 505 aa17.25■□□□□ 0.35
COL18A1-205ENST00000423214 NAIF1Q69YI7 327 aaPredicted RBP17.25■□□□□ 0.35
COL18A1-205ENST00000423214 IQUBQ8NA54 791 aa17.25■□□□□ 0.35
COL18A1-205ENST00000423214 RDH13Q8NBN7 331 aa17.25■□□□□ 0.35
COL18A1-205ENST00000423214 LOXL4Q96JB6 756 aa17.25■□□□□ 0.35
COL18A1-205ENST00000423214 CEP295NLQ96MC4 621 aa17.25■□□□□ 0.35
COL18A1-205ENST00000423214 CGRRF1Q99675 332 aa17.25■□□□□ 0.35
COL18A1-205ENST00000423214 ARRDC1-AS1Q9H2J1 176 aa17.25■□□□□ 0.35
COL18A1-205ENST00000423214 CRTAC1Q9NQ79 661 aa17.25■□□□□ 0.35
COL18A1-205ENST00000423214 AGPAT3Q9NRZ7 376 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms