RNA–Protein interactions for RNA: ENST00000422704.6

SEMA4D-208, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-208ENST00000422704 SREBF1P36956 1147 aa11.05□□□□□ -0.64
SEMA4D-208ENST00000422704 ABCG1P45844 678 aa11.05□□□□□ -0.64
SEMA4D-208ENST00000422704 SCTRP47872 440 aa11.05□□□□□ -0.64
SEMA4D-208ENST00000422704 ITPRIPL1Q6GPH6 555 aa11.05□□□□□ -0.64
SEMA4D-208ENST00000422704 FBXO16Q8IX29 292 aaPredicted RBP11.05□□□□□ -0.64
SEMA4D-208ENST00000422704 KCTD10Q9H3F6 313 aa11.05□□□□□ -0.64
SEMA4D-208ENST00000422704 PSD3Q9NYI0 1048 aa11.05□□□□□ -0.64
SEMA4D-208ENST00000422704 GOLGA8TH3BQL2 631 aa11.05□□□□□ -0.64
SEMA4D-208ENST00000422704 SYF2O95926 243 aaKnown RBP11.05□□□□□ -0.64
SEMA4D-208ENST00000422704 GNAT1P11488 350 aa11.05□□□□□ -0.64
SEMA4D-208ENST00000422704 SHMT1P34896 483 aa11.05□□□□□ -0.64
SEMA4D-208ENST00000422704 RANBP1P43487 201 aa11.05□□□□□ -0.64
SEMA4D-208ENST00000422704 AARSP49588 968 aaKnown RBP eCLIP11.05□□□□□ -0.64
SEMA4D-208ENST00000422704 ARHGDIAP52565 204 aa11.05□□□□□ -0.64
SEMA4D-208ENST00000422704 RCN1Q15293 331 aa11.05□□□□□ -0.64
SEMA4D-208ENST00000422704 APOBEC3FQ8IUX4 373 aaKnown RBP11.05□□□□□ -0.64
SEMA4D-208ENST00000422704 CPB2Q96IY4 423 aa11.05□□□□□ -0.64
SEMA4D-208ENST00000422704 CTNNAL1Q9UBT7 734 aa11.05□□□□□ -0.64
SEMA4D-208ENST00000422704 ATP8B3O60423 1300 aa11.04□□□□□ -0.64
SEMA4D-208ENST00000422704 EEF2KO00418 725 aaKnown RBP11.04□□□□□ -0.64
SEMA4D-208ENST00000422704 SLITRK3O94933 977 aa11.04□□□□□ -0.64
SEMA4D-208ENST00000422704 PTGER2P43116 358 aa11.04□□□□□ -0.64
SEMA4D-208ENST00000422704 COL23A1Q86Y22 540 aaPredicted RBP11.04□□□□□ -0.64
SEMA4D-208ENST00000422704 GIPC2Q8TF65 315 aa11.04□□□□□ -0.64
SEMA4D-208ENST00000422704 TMEM237Q96Q45 408 aa11.04□□□□□ -0.64
SEMA4D-208ENST00000422704 CISHQ9NSE2 258 aa11.04□□□□□ -0.64
SEMA4D-208ENST00000422704 NAALADL1Q9UQQ1 740 aa11.04□□□□□ -0.64
SEMA4D-208ENST00000422704 LRP5O75197 1615 aa11.04□□□□□ -0.64
SEMA4D-208ENST00000422704 RARGP13631 454 aa11.04□□□□□ -0.64
SEMA4D-208ENST00000422704 GPD1P21695 349 aa11.04□□□□□ -0.64
SEMA4D-208ENST00000422704 RARRES1P49788 294 aa11.04□□□□□ -0.64
SEMA4D-208ENST00000422704 TBX2Q13207 712 aaPredicted RBP11.04□□□□□ -0.64
SEMA4D-208ENST00000422704 ATP13A4Q4VNC1 1196 aa11.04□□□□□ -0.64
SEMA4D-208ENST00000422704 RNF219Q5W0B1 726 aaPredicted RBP11.04□□□□□ -0.64
SEMA4D-208ENST00000422704 C16orf87Q6PH81 154 aa11.04□□□□□ -0.64
SEMA4D-208ENST00000422704 DAGLBQ8NCG7 672 aa11.04□□□□□ -0.64
SEMA4D-208ENST00000422704 SYN2Q92777 582 aaPredicted RBP11.04□□□□□ -0.64
SEMA4D-208ENST00000422704 OTULINQ96BN8 352 aa11.04□□□□□ -0.64
SEMA4D-208ENST00000422704 ZNF512Q96ME7 567 aaPredicted RBP11.04□□□□□ -0.64
SEMA4D-208ENST00000422704 RSAD1Q9HA92 442 aa11.04□□□□□ -0.64
SEMA4D-208ENST00000422704 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.04□□□□□ -0.64
SEMA4D-208ENST00000422704 WDR35Q9P2L0 1181 aa11.04□□□□□ -0.64
SEMA4D-208ENST00000422704 NUP98P52948 1817 aa11.04□□□□□ -0.64
SEMA4D-208ENST00000422704 CXCL8P10145 99 aa11.04□□□□□ -0.64
SEMA4D-208ENST00000422704 RARAP10276 462 aa11.04□□□□□ -0.64
SEMA4D-208ENST00000422704 MYL2P10916 166 aa11.04□□□□□ -0.64
SEMA4D-208ENST00000422704 DLG4P78352 724 aa11.04□□□□□ -0.64
SEMA4D-208ENST00000422704 TAF1CQ15572 869 aaPredicted RBP11.04□□□□□ -0.64
SEMA4D-208ENST00000422704 SHROOM1Q2M3G4 852 aaPredicted RBP11.04□□□□□ -0.64
SEMA4D-208ENST00000422704 KDM7AQ6ZMT4 941 aa11.04□□□□□ -0.64
SEMA4D-208ENST00000422704 ADAM32Q8TC27 787 aa11.04□□□□□ -0.64
SEMA4D-208ENST00000422704 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.04□□□□□ -0.642e-6■■■■■ 66.9
SEMA4D-208ENST00000422704 ZNF560Q96MR9 790 aa11.04□□□□□ -0.64
SEMA4D-208ENST00000422704 SEPT5Q99719 369 aaPredicted RBP11.04□□□□□ -0.64
SEMA4D-208ENST00000422704 MAGEB5Q9BZ81 275 aa11.04□□□□□ -0.64
SEMA4D-208ENST00000422704 ATXN3LQ9H3M9 355 aa11.04□□□□□ -0.64
SEMA4D-208ENST00000422704 TMBIM4Q9HC24 238 aa11.04□□□□□ -0.64
SEMA4D-208ENST00000422704 TRPC7Q9HCX4 862 aa11.04□□□□□ -0.64
SEMA4D-208ENST00000422704 CHST7Q9NS84 486 aa11.04□□□□□ -0.64
SEMA4D-208ENST00000422704 ARMCX1Q9P291 453 aa11.04□□□□□ -0.64
SEMA4D-208ENST00000422704 COL5A3P25940 1745 aaPredicted RBP11.04□□□□□ -0.64
SEMA4D-208ENST00000422704 KCNK1O00180 336 aa11.03□□□□□ -0.64
SEMA4D-208ENST00000422704 STMN1P16949 149 aa11.03□□□□□ -0.64
SEMA4D-208ENST00000422704 PTPN7P35236 360 aa11.03□□□□□ -0.64
SEMA4D-208ENST00000422704 SERPINB5P36952 375 aa11.03□□□□□ -0.64
SEMA4D-208ENST00000422704 RPL21P46778 160 aaKnown RBP11.03□□□□□ -0.64
SEMA4D-208ENST00000422704 TAP1Q03518 808 aa11.03□□□□□ -0.64
SEMA4D-208ENST00000422704 LRRC74AQ0VAA2 488 aa11.03□□□□□ -0.64
SEMA4D-208ENST00000422704 NFIL3Q16649 462 aa11.03□□□□□ -0.64
SEMA4D-208ENST00000422704 FIGNQ5HY92 759 aa11.03□□□□□ -0.64
SEMA4D-208ENST00000422704 NRBF2Q96F24 287 aa11.03□□□□□ -0.64
SEMA4D-208ENST00000422704 PDCD2LQ9BRP1 358 aa11.03□□□□□ -0.64
SEMA4D-208ENST00000422704 ABI2Q9NYB9 513 aaPredicted RBP11.03□□□□□ -0.64
SEMA4D-208ENST00000422704 PAK5Q9P286 719 aa11.03□□□□□ -0.64
SEMA4D-208ENST00000422704 SALL1Q9NSC2 1324 aa11.03□□□□□ -0.64
SEMA4D-208ENST00000422704 BCL9LQ86UU0 1499 aa11.03□□□□□ -0.64
SEMA4D-208ENST00000422704 RASSF10A6NK89 507 aa11.03□□□□□ -0.64
SEMA4D-208ENST00000422704 USP12O75317 370 aa11.03□□□□□ -0.64
SEMA4D-208ENST00000422704 IRF1P10914 325 aa11.03□□□□□ -0.64
SEMA4D-208ENST00000422704 MGAT5BQ3V5L5 792 aa11.03□□□□□ -0.64
SEMA4D-208ENST00000422704 WDR59Q6PJI9 974 aa11.03□□□□□ -0.64
SEMA4D-208ENST00000422704 POU5F2Q8N7G0 328 aa11.03□□□□□ -0.64
SEMA4D-208ENST00000422704 NETO2Q8NC67 525 aa11.03□□□□□ -0.64
SEMA4D-208ENST00000422704 PIF1Q9H611 641 aa11.03□□□□□ -0.64
SEMA4D-208ENST00000422704 ARHGEF38Q9NXL2 777 aa11.03□□□□□ -0.64
SEMA4D-208ENST00000422704 LAMB2P55268 1798 aa11.03□□□□□ -0.64
SEMA4D-208ENST00000422704 MYH3P11055 1940 aa11.03□□□□□ -0.64
SEMA4D-208ENST00000422704 ANGPT2O15123 496 aa11.03□□□□□ -0.64
SEMA4D-208ENST00000422704 ICAM1P05362 532 aa11.03□□□□□ -0.64
SEMA4D-208ENST00000422704 PYGBP11216 843 aa11.03□□□□□ -0.64
SEMA4D-208ENST00000422704 ZFXP17010 805 aaPredicted RBP11.03□□□□□ -0.64
SEMA4D-208ENST00000422704 TPH1P17752 444 aa11.03□□□□□ -0.64
SEMA4D-208ENST00000422704 TFE3P19532 575 aaPredicted RBP11.03□□□□□ -0.64
SEMA4D-208ENST00000422704 GEMIN4P57678 1058 aaKnown RBP11.03□□□□□ -0.64
SEMA4D-208ENST00000422704 CNTN2Q02246 1040 aa11.03□□□□□ -0.64
SEMA4D-208ENST00000422704 RBBP7Q16576 425 aa11.03□□□□□ -0.64
SEMA4D-208ENST00000422704 RARS2Q5T160 578 aaKnown RBP11.03□□□□□ -0.64
SEMA4D-208ENST00000422704 PCNX4Q63HM2 1172 aa11.03□□□□□ -0.64
SEMA4D-208ENST00000422704 SPATA2LQ8IUW3 424 aaPredicted RBP11.03□□□□□ -0.64
SEMA4D-208ENST00000422704 ATPAF2Q8N5M1 289 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms