RNA–Protein interactions for RNA: ENST00000422029.6

NDUFA3-208, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 3

Gene NDUFA3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-208ENST00000422029 NXF1Q9UBU9 619 aaKnown RBP12.14□□□□□ -0.47
NDUFA3-208ENST00000422029 CDV3Q9UKY7 258 aaKnown RBP12.14□□□□□ -0.47
NDUFA3-208ENST00000422029 TRAV19A0A0A6YYK7 116 aa12.13□□□□□ -0.47
NDUFA3-208ENST00000422029 GABRDO14764 452 aa12.13□□□□□ -0.47
NDUFA3-208ENST00000422029 DCLK1O15075 740 aa12.13□□□□□ -0.47
NDUFA3-208ENST00000422029 HDCP19113 662 aa12.13□□□□□ -0.47
NDUFA3-208ENST00000422029 GJA4P35212 333 aa12.13□□□□□ -0.47
NDUFA3-208ENST00000422029 RAP1GAPP47736 663 aa12.13□□□□□ -0.47
NDUFA3-208ENST00000422029 LHX1P48742 406 aa12.13□□□□□ -0.47
NDUFA3-208ENST00000422029 SEC13P55735 322 aa12.13□□□□□ -0.47
NDUFA3-208ENST00000422029 MYL6P60660 151 aa12.13□□□□□ -0.47
NDUFA3-208ENST00000422029 POU5F1Q01860 360 aaKnown RBP12.13□□□□□ -0.47
NDUFA3-208ENST00000422029 SMARCB1Q12824 385 aa12.13□□□□□ -0.47
NDUFA3-208ENST00000422029 GRSF1Q12849 480 aaKnown RBP eCLIP12.13□□□□□ -0.47
NDUFA3-208ENST00000422029 CUL4BQ13620 913 aa12.13□□□□□ -0.47
NDUFA3-208ENST00000422029 ALCAMQ13740 583 aa12.13□□□□□ -0.47
NDUFA3-208ENST00000422029 MTF1Q14872 753 aa12.13□□□□□ -0.47
NDUFA3-208ENST00000422029 SF3A2Q15428 464 aaKnown RBP12.13□□□□□ -0.47
NDUFA3-208ENST00000422029 TMEM196Q5HYL7 178 aa12.13□□□□□ -0.47
NDUFA3-208ENST00000422029 FAM26FQ5R3K3 315 aa12.13□□□□□ -0.47
NDUFA3-208ENST00000422029 LAIR1Q6GTX8 287 aa12.13□□□□□ -0.47
NDUFA3-208ENST00000422029 LONP2Q86WA8 852 aa12.13□□□□□ -0.47
NDUFA3-208ENST00000422029 TMEM86AQ8N2M4 240 aa12.13□□□□□ -0.47
NDUFA3-208ENST00000422029 OR6B3Q8NGW1 331 aa12.13□□□□□ -0.47
NDUFA3-208ENST00000422029 SH3RF2Q8TEC5 729 aa12.13□□□□□ -0.47
NDUFA3-208ENST00000422029 SCFD1Q8WVM8 642 aa12.13□□□□□ -0.47
NDUFA3-208ENST00000422029 EZH1Q92800 747 aaPredicted RBP12.13□□□□□ -0.47
NDUFA3-208ENST00000422029 SNX25Q9H3E2 840 aa12.13□□□□□ -0.47
NDUFA3-208ENST00000422029 SEMA4GQ9NTN9 838 aa12.13□□□□□ -0.47
NDUFA3-208ENST00000422029 TMEM30AQ9NV96 361 aa12.13□□□□□ -0.47
NDUFA3-208ENST00000422029 KBTBD4Q9NVX7 518 aa12.13□□□□□ -0.47
NDUFA3-208ENST00000422029 OBSL1O75147 1896 aa12.12□□□□□ -0.47
NDUFA3-208ENST00000422029 CUTAO60888 179 aa12.12□□□□□ -0.47
NDUFA3-208ENST00000422029 USP17L7P0C7H9 530 aa12.12□□□□□ -0.47
NDUFA3-208ENST00000422029 PCSK1P29120 753 aa12.12□□□□□ -0.47
NDUFA3-208ENST00000422029 GNL1P36915 607 aaPredicted RBP12.12□□□□□ -0.47
NDUFA3-208ENST00000422029 IFNAR2P48551 515 aa12.12□□□□□ -0.47
NDUFA3-208ENST00000422029 MLLT6P55198 1093 aaPredicted RBP12.12□□□□□ -0.47
NDUFA3-208ENST00000422029 CDH8P55286 799 aa12.12□□□□□ -0.47
NDUFA3-208ENST00000422029 ZXDBP98169 803 aa12.12□□□□□ -0.47
NDUFA3-208ENST00000422029 ORC1Q13415 861 aa12.12□□□□□ -0.47
NDUFA3-208ENST00000422029 SNRNP35Q16560 246 aaKnown RBP12.12□□□□□ -0.47
NDUFA3-208ENST00000422029 WDR72Q3MJ13 1102 aa12.12□□□□□ -0.47
NDUFA3-208ENST00000422029 FAM171BQ6P995 826 aa12.12□□□□□ -0.47
NDUFA3-208ENST00000422029 SCARA5Q6ZMJ2 495 aa12.12□□□□□ -0.47
NDUFA3-208ENST00000422029 MAMSTRQ6ZN01 415 aa12.12□□□□□ -0.47
NDUFA3-208ENST00000422029 EPM2AIP1Q7L775 607 aaPredicted RBP12.12□□□□□ -0.47
NDUFA3-208ENST00000422029 KBTBD6Q86V97 674 aa12.12□□□□□ -0.47
NDUFA3-208ENST00000422029 TTC30AQ86WT1 665 aa12.12□□□□□ -0.47
NDUFA3-208ENST00000422029 SFTPA1Q8IWL2 248 aa12.12□□□□□ -0.47
NDUFA3-208ENST00000422029 RPLP0P6Q8NHW5 317 aa12.12□□□□□ -0.47
NDUFA3-208ENST00000422029 ZNF507Q8TCN5 953 aa12.12□□□□□ -0.47
NDUFA3-208ENST00000422029 PLEKHO2Q8TD55 490 aa12.12□□□□□ -0.47
NDUFA3-208ENST00000422029 LEO1Q8WVC0 666 aaPredicted RBP12.12□□□□□ -0.47
NDUFA3-208ENST00000422029 PCED1BQ96HM7 432 aa12.12□□□□□ -0.47
NDUFA3-208ENST00000422029 P2RY13Q9BPV8 354 aa12.12□□□□□ -0.47
NDUFA3-208ENST00000422029 ZNF518BQ9C0D4 1074 aa12.12□□□□□ -0.47
NDUFA3-208ENST00000422029 RNF38Q9H0F5 515 aa12.12□□□□□ -0.47
NDUFA3-208ENST00000422029 ARRDC1-AS1Q9H2J1 176 aa12.12□□□□□ -0.47
NDUFA3-208ENST00000422029 TNMDQ9H2S6 317 aa12.12□□□□□ -0.47
NDUFA3-208ENST00000422029 ECT2Q9H8V3 914 aa12.12□□□□□ -0.47
NDUFA3-208ENST00000422029 ZDHHC4Q9NPG8 344 aa12.12□□□□□ -0.47
NDUFA3-208ENST00000422029 RXFP3Q9NSD7 469 aa12.12□□□□□ -0.47
NDUFA3-208ENST00000422029 GCNT4Q9P109 453 aa12.12□□□□□ -0.47
NDUFA3-208ENST00000422029 SERTAD1Q9UHV2 236 aa12.12□□□□□ -0.47
NDUFA3-208ENST00000422029 CDH9Q9ULB4 789 aa12.12□□□□□ -0.47
NDUFA3-208ENST00000422029 PCDHA7Q9UN72 937 aa12.12□□□□□ -0.47
NDUFA3-208ENST00000422029 SLC8A2Q9UPR5 921 aa12.12□□□□□ -0.47
NDUFA3-208ENST00000422029 DENND4CQ5VZ89 1909 aa12.11□□□□□ -0.47
NDUFA3-208ENST00000422029 F8VP50 259 aa12.11□□□□□ -0.47
NDUFA3-208ENST00000422029 TRDMT1O14717 391 aaKnown RBP12.11□□□□□ -0.47
NDUFA3-208ENST00000422029 PHACTR2O75167 634 aa12.11□□□□□ -0.47
NDUFA3-208ENST00000422029 PPP6R2O75170 966 aa12.11□□□□□ -0.47
NDUFA3-208ENST00000422029 HSP90AA1P07900 732 aaKnown RBP12.11□□□□□ -0.47
NDUFA3-208ENST00000422029 RETP07949 1114 aa12.11□□□□□ -0.47
NDUFA3-208ENST00000422029 CCDC192P0DO97 292 aa12.11□□□□□ -0.47
NDUFA3-208ENST00000422029 WEE1P30291 646 aa12.11□□□□□ -0.47
NDUFA3-208ENST00000422029 ME1P48163 572 aa12.11□□□□□ -0.47
NDUFA3-208ENST00000422029 LMNB2Q03252 620 aa12.11□□□□□ -0.47
NDUFA3-208ENST00000422029 FAM160A1Q05DH4 1040 aa12.11□□□□□ -0.47
NDUFA3-208ENST00000422029 CYP24A1Q07973 514 aa12.11□□□□□ -0.47
NDUFA3-208ENST00000422029 KCNB1Q14721 858 aa12.11□□□□□ -0.47
NDUFA3-208ENST00000422029 ZNF77Q15935 545 aa12.11□□□□□ -0.47
NDUFA3-208ENST00000422029 STXBP4Q6ZWJ1 553 aa12.11□□□□□ -0.47
NDUFA3-208ENST00000422029 WDR49Q8IV35 697 aa12.11□□□□□ -0.47
NDUFA3-208ENST00000422029 CCDC33Q8N5R6 958 aa12.11□□□□□ -0.47
NDUFA3-208ENST00000422029 IQUBQ8NA54 791 aa12.11□□□□□ -0.47
NDUFA3-208ENST00000422029 ERLEC1Q96DZ1 483 aa12.11□□□□□ -0.47
NDUFA3-208ENST00000422029 MSANTD3Q96H12 275 aa12.11□□□□□ -0.47
NDUFA3-208ENST00000422029 FNBP1Q96RU3 617 aa12.11□□□□□ -0.47
NDUFA3-208ENST00000422029 CGRRF1Q99675 332 aa12.11□□□□□ -0.47
NDUFA3-208ENST00000422029 C7orf25Q9BPX7 421 aa12.11□□□□□ -0.47
NDUFA3-208ENST00000422029 IER2Q9BTL4 223 aa12.11□□□□□ -0.47
NDUFA3-208ENST00000422029 GZF1Q9H116 711 aaPredicted RBP12.11□□□□□ -0.47
NDUFA3-208ENST00000422029 ABCB6Q9NP58 842 aa12.11□□□□□ -0.47
NDUFA3-208ENST00000422029 SPTBN2O15020 2390 aa12.1□□□□□ -0.47
NDUFA3-208ENST00000422029 A8MXQ7 604 aa12.1□□□□□ -0.47
NDUFA3-208ENST00000422029 LEFTY2O00292 366 aa12.1□□□□□ -0.47
NDUFA3-208ENST00000422029 EXOC3O60645 756 aa12.1□□□□□ -0.47
NDUFA3-208ENST00000422029 RPP40O75818 363 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms