RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 TWF1Q12792 350 aa10.2□□□□□ -0.78
CMSS1-201ENST00000421999 PIGHQ14442 188 aaPredicted RBP10.2□□□□□ -0.78
CMSS1-201ENST00000421999 ANO4Q32M45 955 aa10.2□□□□□ -0.78
CMSS1-201ENST00000421999 ITPRIPL1Q6GPH6 555 aa10.2□□□□□ -0.78
CMSS1-201ENST00000421999 ZNF677Q86XU0 584 aa10.2□□□□□ -0.78
CMSS1-201ENST00000421999 ARHGAP18Q8N392 663 aa10.2□□□□□ -0.78
CMSS1-201ENST00000421999 TMEM176AQ96HP8 235 aa10.2□□□□□ -0.78
CMSS1-201ENST00000421999 NTPCRQ9BSD7 190 aaKnown RBP10.2□□□□□ -0.78
CMSS1-201ENST00000421999 EMILIN2Q9BXX0 1053 aa10.2□□□□□ -0.78
CMSS1-201ENST00000421999 ST6GALNAC4Q9H4F1 302 aa10.2□□□□□ -0.78
CMSS1-201ENST00000421999 WDCPQ9H6R7 721 aa10.2□□□□□ -0.78
CMSS1-201ENST00000421999 CYP3A43Q9HB55 503 aa10.2□□□□□ -0.78
CMSS1-201ENST00000421999 F8W8V4 182 aa10.2□□□□□ -0.78
CMSS1-201ENST00000421999 H0Y626 953 aa10.2□□□□□ -0.78
CMSS1-201ENST00000421999 RNF225M0QZC1 329 aaPredicted RBP10.2□□□□□ -0.78
CMSS1-201ENST00000421999 NDUFAB1O14561 156 aa10.2□□□□□ -0.78
CMSS1-201ENST00000421999 MX2P20592 715 aa10.2□□□□□ -0.78
CMSS1-201ENST00000421999 ATICP31939 592 aa10.2□□□□□ -0.78
CMSS1-201ENST00000421999 EIF3EP60228 445 aaKnown RBP10.2□□□□□ -0.78
CMSS1-201ENST00000421999 GCNT1Q02742 428 aa10.2□□□□□ -0.78
CMSS1-201ENST00000421999 GPS1Q13098 491 aa10.2□□□□□ -0.78
CMSS1-201ENST00000421999 ZACNQ401N2 412 aa10.2□□□□□ -0.78
CMSS1-201ENST00000421999 NOMO2Q5JPE7 1267 aa10.2□□□□□ -0.78
CMSS1-201ENST00000421999 SDE2Q6IQ49 451 aa10.2□□□□□ -0.78
CMSS1-201ENST00000421999 PCYT2Q99447 389 aa10.2□□□□□ -0.78
CMSS1-201ENST00000421999 ATXN3LQ9H3M9 355 aa10.2□□□□□ -0.78
CMSS1-201ENST00000421999 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.2□□□□□ -0.78
CMSS1-201ENST00000421999 COL4A5P29400 1685 aa10.2□□□□□ -0.78
CMSS1-201ENST00000421999 ADGRA3Q8IWK6 1321 aa10.2□□□□□ -0.78
CMSS1-201ENST00000421999 CNTNAP2Q9UHC6 1331 aa10.2□□□□□ -0.78
CMSS1-201ENST00000421999 PRR23AA6NEV1 266 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 EDIL3O43854 480 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 ATP9BO43861 1147 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 NAA30Q147X3 362 aaPredicted RBP10.19□□□□□ -0.78
CMSS1-201ENST00000421999 SLMAPQ14BN4 828 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 NXNQ6DKJ4 435 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 ACAD10Q6JQN1 1059 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 CDKL3Q8IVW4 592 aaPredicted RBP10.19□□□□□ -0.78
CMSS1-201ENST00000421999 ATPAF2Q8N5M1 289 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 SPDYE1Q8NFV5 336 aaPredicted RBP10.19□□□□□ -0.78
CMSS1-201ENST00000421999 ZNF606Q8WXB4 792 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 TRIB2Q92519 343 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 HSD3B7Q9H2F3 369 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 TRMT13Q9NUP7 481 aaKnown RBP10.19□□□□□ -0.78
CMSS1-201ENST00000421999 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.19□□□□□ -0.78
CMSS1-201ENST00000421999 GOLGA4Q13439 2230 aaKnown RBP10.19□□□□□ -0.78
CMSS1-201ENST00000421999 MYH8P13535 1937 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 EXOC1LA0A1B0GW35 172 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 EBAG9O00559 213 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 LGR5O75473 907 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 ATP4AP20648 1035 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 HP1BP3Q5SSJ5 553 aaPredicted RBP10.19□□□□□ -0.78
CMSS1-201ENST00000421999 SYCP2LQ5T4T6 812 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 ANKRD20A3Q5VUR7 823 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 C12orf56Q8IXR9 622 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 DDI1Q8WTU0 396 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 BTBD6Q96KE9 485 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 RNPC3Q96LT9 517 aaKnown RBP10.19□□□□□ -0.78
CMSS1-201ENST00000421999 SAYSD1Q9NPB0 183 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 FAM105AQ9NUU6 356 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 GTF3C4Q9UKN8 822 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 ALG6Q9Y672 507 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 UMODL1Q5DID0 1318 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 DNAJC25-GNG10A0A024R161 153 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 ASMTLO95671 621 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 PAMP19021 973 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 SLC1A1P43005 524 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 TKTL1P51854 596 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 FAM131BQ86XD5 332 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 EFHBQ8N7U6 833 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 FEZF2Q8TBJ5 459 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 EXT2Q93063 718 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 MS4A14Q96JA4 679 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 MAGEB5Q9BZ81 275 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 CIPCQ9C0C6 399 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 MRPL17Q9NRX2 175 aaKnown RBP10.19□□□□□ -0.78
CMSS1-201ENST00000421999 BARX2Q9UMQ3 279 aaPredicted RBP10.19□□□□□ -0.78
CMSS1-201ENST00000421999 MAPK13O15264 365 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 SELPP16109 830 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 SP100P23497 879 aaPredicted RBP10.19□□□□□ -0.78
CMSS1-201ENST00000421999 RRM1P23921 792 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 ADSSP30520 456 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 ACLYP53396 1101 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 ARL4CP56559 192 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 TLE2Q04725 743 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 NR1H3Q13133 447 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 SLC39A12Q504Y0 691 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 KCTD16Q68DU8 428 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 FOXR2Q6PJQ5 311 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 SDCCAG8Q86SQ7 713 aaPredicted RBP10.19□□□□□ -0.78
CMSS1-201ENST00000421999 ZNF296Q8WUU4 475 aaPredicted RBP10.19□□□□□ -0.78
CMSS1-201ENST00000421999 EDEM1Q92611 657 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 MFSD14AQ96MC6 490 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 APOL5Q9BWW9 433 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 OSGEPQ9NPF4 335 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 PADI3Q9ULW8 664 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 SNX12Q9UMY4 172 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 CAPN6Q9Y6Q1 641 aa10.19□□□□□ -0.78
CMSS1-201ENST00000421999 MAP1BP46821 2468 aaKnown RBP10.18□□□□□ -0.78
CMSS1-201ENST00000421999 CCDC78A2IDD5 438 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms