RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 BICD1Q96G01 975 aa22.27■■□□□ 1.16
USP48-205ENST00000421625 MASTLQ96GX5 879 aa22.27■■□□□ 1.16
USP48-205ENST00000421625 PANX3Q96QZ0 392 aa22.27■■□□□ 1.16
USP48-205ENST00000421625 ANGPTL2Q9UKU9 493 aa22.27■■□□□ 1.16
USP48-205ENST00000421625 VNN1O95497 513 aa22.27■■□□□ 1.16
USP48-205ENST00000421625 FAAP100Q0VG06 881 aa22.27■■□□□ 1.16
USP48-205ENST00000421625 PTK7Q13308 1070 aa22.27■■□□□ 1.16
USP48-205ENST00000421625 HSF5Q4G112 596 aaPredicted RBP22.27■■□□□ 1.16
USP48-205ENST00000421625 C4orf19Q8IY42 314 aa22.27■■□□□ 1.16
USP48-205ENST00000421625 APOPT1Q96IL0 206 aa22.27■■□□□ 1.16
USP48-205ENST00000421625 NFIBO00712 420 aa22.26■■□□□ 1.15
USP48-205ENST00000421625 ALDH1B1P30837 517 aa22.26■■□□□ 1.15
USP48-205ENST00000421625 CUL2Q13617 745 aa22.26■■□□□ 1.15
USP48-205ENST00000421625 FAM182AQ5T1J6 154 aa22.26■■□□□ 1.15
USP48-205ENST00000421625 ARHGAP24Q8N264 748 aa22.26■■□□□ 1.15
USP48-205ENST00000421625 NR1H4Q96RI1 486 aaPredicted RBP22.26■■□□□ 1.15
USP48-205ENST00000421625 TTC1Q99614 292 aa22.26■■□□□ 1.15
USP48-205ENST00000421625 FAM192AQ9GZU8 254 aa22.26■■□□□ 1.15
USP48-205ENST00000421625 ASCC2Q9H1I8 757 aaPredicted RBP22.26■■□□□ 1.15
USP48-205ENST00000421625 TMX2Q9Y320 296 aa22.26■■□□□ 1.15
USP48-205ENST00000421625 RPL22P35268 128 aaKnown RBP22.26■■□□□ 1.15
USP48-205ENST00000421625 OTUD4Q01804 1114 aaKnown RBP22.26■■□□□ 1.15
USP48-205ENST00000421625 MTMR1Q13613 665 aa22.26■■□□□ 1.15
USP48-205ENST00000421625 PDCD2Q16342 344 aaPredicted RBP22.26■■□□□ 1.15
USP48-205ENST00000421625 ZACNQ401N2 412 aa22.26■■□□□ 1.15
USP48-205ENST00000421625 ACTL9Q8TC94 416 aa22.26■■□□□ 1.15
USP48-205ENST00000421625 CHURC1Q8WUH1 139 aa22.26■■□□□ 1.15
USP48-205ENST00000421625 AZIN2Q96A70 460 aa22.26■■□□□ 1.15
USP48-205ENST00000421625 CYTH2Q99418 400 aa22.26■■□□□ 1.15
USP48-205ENST00000421625 MECRQ9BV79 373 aa22.26■■□□□ 1.15
USP48-205ENST00000421625 RGS17Q9UGC6 210 aaPredicted RBP22.26■■□□□ 1.15
USP48-205ENST00000421625 STRIP2Q9ULQ0 834 aa22.26■■□□□ 1.15
USP48-205ENST00000421625 MAGEC1O60732 1142 aa22.26■■□□□ 1.15
USP48-205ENST00000421625 KDSRQ06136 332 aa22.26■■□□□ 1.15
USP48-205ENST00000421625 CNPY1Q3B7I2 92 aa22.26■■□□□ 1.15
USP48-205ENST00000421625 CIAPIN1Q6FI81 312 aa22.26■■□□□ 1.15
USP48-205ENST00000421625 ANO5Q75V66 913 aa22.26■■□□□ 1.15
USP48-205ENST00000421625 PCGF5Q86SE9 256 aa22.26■■□□□ 1.15
USP48-205ENST00000421625 SCUBE1Q8IWY4 988 aa22.26■■□□□ 1.15
USP48-205ENST00000421625 TMX4Q9H1E5 349 aaPredicted RBP22.26■■□□□ 1.15
USP48-205ENST00000421625 CNTN3Q9P232 1028 aa22.26■■□□□ 1.15
USP48-205ENST00000421625 CAPN14A8MX76 684 aa22.25■■□□□ 1.15
USP48-205ENST00000421625 BAG2O95816 211 aa22.25■■□□□ 1.15
USP48-205ENST00000421625 HSD17B4P51659 736 aa22.25■■□□□ 1.15
USP48-205ENST00000421625 NRLP54845 237 aa22.25■■□□□ 1.15
USP48-205ENST00000421625 RTP1P59025 263 aa22.25■■□□□ 1.15
USP48-205ENST00000421625 DSG1Q02413 1049 aa22.25■■□□□ 1.15
USP48-205ENST00000421625 SCARA3Q6AZY7 606 aa22.25■■□□□ 1.15
USP48-205ENST00000421625 CDHR3Q6ZTQ4 885 aa22.25■■□□□ 1.15
USP48-205ENST00000421625 TMPRSS6Q8IU80 811 aa22.25■■□□□ 1.15
USP48-205ENST00000421625 SLC25A41Q8N5S1 370 aa22.25■■□□□ 1.15
USP48-205ENST00000421625 FNBP1Q96RU3 617 aa22.25■■□□□ 1.15
USP48-205ENST00000421625 ECSITQ9BQ95 431 aa22.25■■□□□ 1.15
USP48-205ENST00000421625 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.25■■□□□ 1.15
USP48-205ENST00000421625 E7ESA3 106 aa22.25■■□□□ 1.15
USP48-205ENST00000421625 CCNE2O96020 404 aa22.25■■□□□ 1.15
USP48-205ENST00000421625 C4BPAP04003 597 aaKnown RBP22.25■■□□□ 1.15
USP48-205ENST00000421625 MMP8P22894 467 aa22.25■■□□□ 1.15
USP48-205ENST00000421625 SMTNL2Q2TAL5 461 aa22.25■■□□□ 1.15
USP48-205ENST00000421625 SYCP2LQ5T4T6 812 aa22.25■■□□□ 1.15
USP48-205ENST00000421625 RASIP1Q5U651 963 aa22.25■■□□□ 1.15
USP48-205ENST00000421625 SH2D5Q6ZV89 423 aa22.25■■□□□ 1.15
USP48-205ENST00000421625 SHKBP1Q8TBC3 707 aa22.25■■□□□ 1.15
USP48-205ENST00000421625 THTPAQ9BU02 230 aa22.25■■□□□ 1.15
USP48-205ENST00000421625 ZNF395Q9H8N7 513 aaPredicted RBP22.25■■□□□ 1.15
USP48-205ENST00000421625 PPARGC1AQ9UBK2 798 aaKnown RBP22.25■■□□□ 1.15
USP48-205ENST00000421625 PPM1HQ9ULR3 514 aa22.25■■□□□ 1.15
USP48-205ENST00000421625 PLA2G4CQ9UP65 541 aa22.25■■□□□ 1.15
USP48-205ENST00000421625 ACOT2P49753 483 aa22.24■■□□□ 1.15
USP48-205ENST00000421625 TAS1R3Q7RTX0 852 aa22.24■■□□□ 1.15
USP48-205ENST00000421625 ULK2Q8IYT8 1036 aa22.24■■□□□ 1.15
USP48-205ENST00000421625 FLAD1Q8NFF5 587 aa22.24■■□□□ 1.15
USP48-205ENST00000421625 EZH1Q92800 747 aaPredicted RBP22.24■■□□□ 1.15
USP48-205ENST00000421625 XPO7Q9UIA9 1087 aaKnown RBP22.24■■□□□ 1.15
USP48-205ENST00000421625 UBIAD1Q9Y5Z9 338 aa22.24■■□□□ 1.15
USP48-205ENST00000421625 F8W8V4 182 aa22.24■■□□□ 1.15
USP48-205ENST00000421625 KBTBD12Q3ZCT8 623 aa22.24■■□□□ 1.15
USP48-205ENST00000421625 DCUN1D2Q6PH85 259 aa22.24■■□□□ 1.15
USP48-205ENST00000421625 NET1Q7Z628 596 aaPredicted RBP22.24■■□□□ 1.15
USP48-205ENST00000421625 MYLK4Q86YV6 388 aaPredicted RBP22.24■■□□□ 1.15
USP48-205ENST00000421625 IQANK1A0A1B0GTG1 560 aa22.23■■□□□ 1.15
USP48-205ENST00000421625 FAM155BO75949 473 aa22.23■■□□□ 1.15
USP48-205ENST00000421625 NLRP11P59045 1033 aaKnown RBP22.23■■□□□ 1.15
USP48-205ENST00000421625 SLC18A2Q05940 514 aa22.23■■□□□ 1.15
USP48-205ENST00000421625 LRRC38Q5VT99 294 aa22.23■■□□□ 1.15
USP48-205ENST00000421625 CES4AQ5XG92 561 aa22.23■■□□□ 1.15
USP48-205ENST00000421625 FAM91A1Q658Y4 838 aa22.23■■□□□ 1.15
USP48-205ENST00000421625 B4GALNT2Q8NHY0 566 aa22.23■■□□□ 1.15
USP48-205ENST00000421625 NDE1Q9NXR1 346 aa22.23■■□□□ 1.15
USP48-205ENST00000421625 SLC7A8Q9UHI5 535 aa22.23■■□□□ 1.15
USP48-205ENST00000421625 CCPG1Q9ULG6 757 aa22.23■■□□□ 1.15
USP48-205ENST00000421625 DCAF8L1A6NGE4 600 aa22.23■■□□□ 1.15
USP48-205ENST00000421625 PTPN7P35236 360 aa22.23■■□□□ 1.15
USP48-205ENST00000421625 ELK3P41970 407 aa22.23■■□□□ 1.15
USP48-205ENST00000421625 CDC16Q13042 620 aa22.23■■□□□ 1.15
USP48-205ENST00000421625 DNAJC24Q6P3W2 148 aa22.23■■□□□ 1.15
USP48-205ENST00000421625 ARHGAP22Q7Z5H3 698 aa22.23■■□□□ 1.15
USP48-205ENST00000421625 UNC45BQ8IWX7 931 aa22.23■■□□□ 1.15
USP48-205ENST00000421625 AGTPBP1Q9UPW5 1226 aa22.23■■□□□ 1.15
USP48-205ENST00000421625 NUB1Q9Y5A7 615 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms