RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 B3GNT5Q9BYG0 378 aa11.51□□□□□ -0.57
DDX56-203ENST00000421223 TUBGCP4Q9UGJ1 667 aa11.51□□□□□ -0.57
DDX56-203ENST00000421223 HEY1Q9Y5J3 304 aa11.51□□□□□ -0.57
DDX56-203ENST00000421223 IQCA1LA6NCM1 817 aa11.5□□□□□ -0.57
DDX56-203ENST00000421223 MMP3P08254 477 aa11.5□□□□□ -0.57
DDX56-203ENST00000421223 CYP2C9P11712 490 aa11.5□□□□□ -0.57
DDX56-203ENST00000421223 CDKN2BP42772 138 aa11.5□□□□□ -0.57
DDX56-203ENST00000421223 BASP1P80723 227 aaKnown RBP11.5□□□□□ -0.57
DDX56-203ENST00000421223 MYO1EQ12965 1108 aa11.5□□□□□ -0.57
DDX56-203ENST00000421223 GOLGA7BQ2TAP0 167 aa11.5□□□□□ -0.57
DDX56-203ENST00000421223 PPP6R3Q5H9R7 873 aaPredicted RBP11.5□□□□□ -0.57
DDX56-203ENST00000421223 CCDC13Q8IYE1 715 aa11.5□□□□□ -0.57
DDX56-203ENST00000421223 CYP4X1Q8N118 509 aa11.5□□□□□ -0.57
DDX56-203ENST00000421223 FAM71DQ8N9W8 422 aa11.5□□□□□ -0.57
DDX56-203ENST00000421223 RXFP2Q8WXD0 754 aa11.5□□□□□ -0.57
DDX56-203ENST00000421223 PGM2Q96G03 612 aa11.5□□□□□ -0.57
DDX56-203ENST00000421223 ZMAT2Q96NC0 199 aaKnown RBP11.5□□□□□ -0.57
DDX56-203ENST00000421223 ELAC2Q9BQ52 826 aaKnown RBP11.5□□□□□ -0.57
DDX56-203ENST00000421223 NXF3Q9H4D5 531 aaKnown RBP11.5□□□□□ -0.57
DDX56-203ENST00000421223 GOLGA2P5Q9HBQ8 144 aa11.5□□□□□ -0.57
DDX56-203ENST00000421223 GBA2Q9HCG7 927 aaPredicted RBP11.5□□□□□ -0.57
DDX56-203ENST00000421223 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.5□□□□□ -0.57
DDX56-203ENST00000421223 DDX20Q9UHI6 824 aaKnown RBP11.5□□□□□ -0.57
DDX56-203ENST00000421223 PCDHGC3Q9UN70 934 aa11.5□□□□□ -0.57
DDX56-203ENST00000421223 PIN4Q9Y237 131 aaKnown RBP11.5□□□□□ -0.57
DDX56-203ENST00000421223 WDR90Q96KV7 1748 aa11.5□□□□□ -0.57
DDX56-203ENST00000421223 SYNJ2BP-COX16A0A087WUM0 186 aa11.5□□□□□ -0.57
DDX56-203ENST00000421223 TMEM120BA0PK00 339 aa11.5□□□□□ -0.57
DDX56-203ENST00000421223 SPAG7O75391 227 aa11.5□□□□□ -0.57
DDX56-203ENST00000421223 AGTP01019 485 aa11.5□□□□□ -0.57
DDX56-203ENST00000421223 MYL3P08590 195 aa11.5□□□□□ -0.57
DDX56-203ENST00000421223 GDF10P55107 478 aa11.5□□□□□ -0.57
DDX56-203ENST00000421223 PDIA2Q13087 525 aaKnown RBP11.5□□□□□ -0.57
DDX56-203ENST00000421223 MARCH8Q5T0T0 291 aa11.5□□□□□ -0.57
DDX56-203ENST00000421223 PPP1R26Q5T8A7 1209 aaPredicted RBP11.5□□□□□ -0.57
DDX56-203ENST00000421223 PPP1R2P3Q6NXS1 205 aa11.5□□□□□ -0.57
DDX56-203ENST00000421223 TAOK1Q7L7X3 1001 aa11.5□□□□□ -0.57
DDX56-203ENST00000421223 PLEKHH3Q7Z736 793 aa11.5□□□□□ -0.57
DDX56-203ENST00000421223 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.5□□□□□ -0.57
DDX56-203ENST00000421223 THOC1Q96FV9 657 aaKnown RBP11.5□□□□□ -0.57
DDX56-203ENST00000421223 CFAP57Q96MR6 1250 aa11.5□□□□□ -0.57
DDX56-203ENST00000421223 CCDC77Q9BR77 488 aa11.5□□□□□ -0.57
DDX56-203ENST00000421223 NT5C1AQ9BXI3 368 aa11.5□□□□□ -0.57
DDX56-203ENST00000421223 ASB7Q9H672 318 aa11.5□□□□□ -0.57
DDX56-203ENST00000421223 COX16Q9P0S2 106 aa11.5□□□□□ -0.57
DDX56-203ENST00000421223 USP18Q9UMW8 372 aa11.5□□□□□ -0.57
DDX56-203ENST00000421223 CAPN7Q9Y6W3 813 aa11.5□□□□□ -0.57
DDX56-203ENST00000421223 EXOC1LA0A1B0GW35 172 aa11.49□□□□□ -0.57
DDX56-203ENST00000421223 STRNO43815 780 aa11.49□□□□□ -0.57
DDX56-203ENST00000421223 CPP00450 1065 aa11.49□□□□□ -0.57
DDX56-203ENST00000421223 BRAFP15056 766 aa11.49□□□□□ -0.57
DDX56-203ENST00000421223 RHBDF2Q6PJF5 856 aa11.49□□□□□ -0.57
DDX56-203ENST00000421223 SYDE1Q6ZW31 735 aaPredicted RBP11.49□□□□□ -0.57
DDX56-203ENST00000421223 MICALCLQ6ZW33 695 aa11.49□□□□□ -0.57
DDX56-203ENST00000421223 LRRC34Q8IZ02 419 aa11.49□□□□□ -0.57
DDX56-203ENST00000421223 CACNA2D3Q8IZS8 1091 aa11.49□□□□□ -0.57
DDX56-203ENST00000421223 PPM1EQ8WY54 764 aa11.49□□□□□ -0.57
DDX56-203ENST00000421223 CHMP6Q96FZ7 201 aa11.49□□□□□ -0.57
DDX56-203ENST00000421223 SEC16BQ96JE7 1060 aa11.49□□□□□ -0.57
DDX56-203ENST00000421223 PTPN18Q99952 460 aa11.49□□□□□ -0.57
DDX56-203ENST00000421223 BCO2Q9BYV7 579 aa11.49□□□□□ -0.57
DDX56-203ENST00000421223 STMN4Q9H169 189 aaPredicted RBP11.49□□□□□ -0.57
DDX56-203ENST00000421223 CNOT10Q9H9A5 744 aaKnown RBP11.49□□□□□ -0.57
DDX56-203ENST00000421223 BARX2Q9UMQ3 279 aaPredicted RBP11.49□□□□□ -0.57
DDX56-203ENST00000421223 SH3BP1Q9Y3L3 701 aa11.49□□□□□ -0.57
DDX56-203ENST00000421223 TCRBV5S1A1TA0A578 114 aa11.49□□□□□ -0.57
DDX56-203ENST00000421223 A8MXQ7 604 aa11.49□□□□□ -0.57
DDX56-203ENST00000421223 F5H423 210 aaPredicted RBP11.49□□□□□ -0.57
DDX56-203ENST00000421223 KRT7P08729 469 aa11.49□□□□□ -0.57
DDX56-203ENST00000421223 KRT15P19012 456 aa11.49□□□□□ -0.57
DDX56-203ENST00000421223 KDELR1P24390 212 aa11.49□□□□□ -0.57
DDX56-203ENST00000421223 GPD2P43304 727 aa11.49□□□□□ -0.57
DDX56-203ENST00000421223 VCPP55072 806 aaKnown RBP11.49□□□□□ -0.57
DDX56-203ENST00000421223 LMNB2Q03252 620 aa11.49□□□□□ -0.57
DDX56-203ENST00000421223 KRT81Q14533 505 aa11.49□□□□□ -0.57
DDX56-203ENST00000421223 DUSP28Q4G0W2 176 aa11.49□□□□□ -0.57
DDX56-203ENST00000421223 GKAP1Q5VSY0 366 aaPredicted RBP11.49□□□□□ -0.57
DDX56-203ENST00000421223 CCDC121Q6ZUS5 278 aa11.49□□□□□ -0.57
DDX56-203ENST00000421223 C2orf69Q8N8R5 385 aa11.49□□□□□ -0.57
DDX56-203ENST00000421223 GCOM2Q9BZD3 368 aaPredicted RBP11.49□□□□□ -0.57
DDX56-203ENST00000421223 ABHD16BQ9H3Z7 469 aa11.49□□□□□ -0.57
DDX56-203ENST00000421223 DDX56Q9NY93 547 aaKnown RBP11.49□□□□□ -0.57
DDX56-203ENST00000421223 TPX2Q9ULW0 747 aaKnown RBP11.49□□□□□ -0.57
DDX56-203ENST00000421223 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.49□□□□□ -0.57
DDX56-203ENST00000421223 NAALADL1Q9UQQ1 740 aa11.49□□□□□ -0.57
DDX56-203ENST00000421223 KAT6AQ92794 2004 aa11.49□□□□□ -0.57
DDX56-203ENST00000421223 A0A087WUV0 522 aaPredicted RBP11.49□□□□□ -0.57
DDX56-203ENST00000421223 A0A1B0GUA9 196 aa11.49□□□□□ -0.57
DDX56-203ENST00000421223 H7C0C1 242 aa11.49□□□□□ -0.57
DDX56-203ENST00000421223 PAEPP09466 180 aa11.49□□□□□ -0.57
DDX56-203ENST00000421223 VDRP11473 427 aa11.49□□□□□ -0.57
DDX56-203ENST00000421223 LCP1P13796 627 aa11.49□□□□□ -0.57
DDX56-203ENST00000421223 CYP3A5P20815 502 aa11.49□□□□□ -0.57
DDX56-203ENST00000421223 ATP5OP48047 213 aa11.49□□□□□ -0.57
DDX56-203ENST00000421223 GCLCP48506 637 aaPredicted RBP11.49□□□□□ -0.57
DDX56-203ENST00000421223 EIF3EP60228 445 aaKnown RBP11.49□□□□□ -0.57
DDX56-203ENST00000421223 TAP1Q03518 808 aa11.49□□□□□ -0.57
DDX56-203ENST00000421223 CCL14Q16627 93 aa11.49□□□□□ -0.57
DDX56-203ENST00000421223 BBS9Q3SYG4 887 aa11.49□□□□□ -0.57
DDX56-203ENST00000421223 PPP1R15BQ5SWA1 713 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms