RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 GOLGA6L10A6NI86 522 aa7.79□□□□□ -1.16
BDNF-209ENST00000420794 CCDC85CA6NKD9 419 aa7.79□□□□□ -1.16
BDNF-209ENST00000420794 OR6C75A6NL08 312 aa7.79□□□□□ -1.16
BDNF-209ENST00000420794 C9IYK1 514 aa7.79□□□□□ -1.16
BDNF-209ENST00000420794 PIRO00625 290 aa7.79□□□□□ -1.16
BDNF-209ENST00000420794 SYN3O14994 580 aa7.79□□□□□ -1.16
BDNF-209ENST00000420794 TJP3O95049 919 aa7.79□□□□□ -1.16
BDNF-209ENST00000420794 CCDC130P13994 396 aa7.79□□□□□ -1.16
BDNF-209ENST00000420794 TYMPP19971 482 aa7.79□□□□□ -1.16
BDNF-209ENST00000420794 WARSP23381 471 aaKnown RBP7.79□□□□□ -1.16
BDNF-209ENST00000420794 LMAN1P49257 510 aa7.79□□□□□ -1.16
BDNF-209ENST00000420794 PDCLQ13371 301 aa7.79□□□□□ -1.16
BDNF-209ENST00000420794 TFDP2Q14188 446 aa7.79□□□□□ -1.16
BDNF-209ENST00000420794 PSRC1Q6PGN9 363 aaPredicted RBP7.79□□□□□ -1.16
BDNF-209ENST00000420794 TMC7Q7Z402 723 aa7.79□□□□□ -1.16
BDNF-209ENST00000420794 HOOK3Q86VS8 718 aa7.79□□□□□ -1.16
BDNF-209ENST00000420794 SLC4A11Q8NBS3 891 aa7.79□□□□□ -1.16
BDNF-209ENST00000420794 C3orf20Q8ND61 904 aa7.79□□□□□ -1.16
BDNF-209ENST00000420794 SPATA18Q8TC71 538 aa7.79□□□□□ -1.16
BDNF-209ENST00000420794 RIN2Q8WYP3 895 aaPredicted RBP7.79□□□□□ -1.16
BDNF-209ENST00000420794 HSPH1Q92598 858 aa7.79□□□□□ -1.16
BDNF-209ENST00000420794 SLITRK1Q96PX8 696 aa7.79□□□□□ -1.16
BDNF-209ENST00000420794 TAS2R14Q9NYV8 317 aa7.79□□□□□ -1.16
BDNF-209ENST00000420794 MTRF1LQ9UGC7 380 aaKnown RBP7.79□□□□□ -1.16
BDNF-209ENST00000420794 GRIN2DO15399 1336 aa7.79□□□□□ -1.16
BDNF-209ENST00000420794 GRID2IPA4D2P6 1211 aa7.79□□□□□ -1.16
BDNF-209ENST00000420794 NDC80O14777 642 aa7.79□□□□□ -1.16
BDNF-209ENST00000420794 SRGAP2O75044 1071 aa7.79□□□□□ -1.16
BDNF-209ENST00000420794 GRAP2O75791 330 aa7.79□□□□□ -1.16
BDNF-209ENST00000420794 CALCAP01258 141 aa7.79□□□□□ -1.16
BDNF-209ENST00000420794 NPR3P17342 541 aa7.79□□□□□ -1.16
BDNF-209ENST00000420794 WNT7BP56706 349 aa7.79□□□□□ -1.16
BDNF-209ENST00000420794 MGAT3Q09327 533 aa7.79□□□□□ -1.16
BDNF-209ENST00000420794 HIC1Q14526 733 aa7.79□□□□□ -1.16
BDNF-209ENST00000420794 SOWAHAQ2M3V2 549 aa7.79□□□□□ -1.16
BDNF-209ENST00000420794 C11orf63Q6NUN7 778 aa7.79□□□□□ -1.16
BDNF-209ENST00000420794 GPR161Q8N6U8 529 aaKnown RBP7.79□□□□□ -1.16
BDNF-209ENST00000420794 C12orf29Q8N999 325 aa7.79□□□□□ -1.16
BDNF-209ENST00000420794 IFT81Q8WYA0 676 aa7.79□□□□□ -1.16
BDNF-209ENST00000420794 ARMC5Q96C12 935 aa7.79□□□□□ -1.16
BDNF-209ENST00000420794 OXCT2Q9BYC2 517 aaPredicted RBP7.79□□□□□ -1.16
BDNF-209ENST00000420794 DONSONQ9NYP3 566 aa7.79□□□□□ -1.16
BDNF-209ENST00000420794 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.79□□□□□ -1.16
BDNF-209ENST00000420794 STK39Q9UEW8 545 aa7.79□□□□□ -1.16
BDNF-209ENST00000420794 PCDHB8Q9UN66 801 aa7.79□□□□□ -1.16
BDNF-209ENST00000420794 MAGED2Q9UNF1 606 aaPredicted RBP7.79□□□□□ -1.16
BDNF-209ENST00000420794 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.79□□□□□ -1.16
BDNF-209ENST00000420794 O00370 1275 aa7.78□□□□□ -1.16
BDNF-209ENST00000420794 PROSCO94903 275 aa7.78□□□□□ -1.16
BDNF-209ENST00000420794 HOXC8P31273 242 aa7.78□□□□□ -1.16
BDNF-209ENST00000420794 TKTL1P51854 596 aa7.78□□□□□ -1.16
BDNF-209ENST00000420794 SMARCB1Q12824 385 aa7.78□□□□□ -1.16
BDNF-209ENST00000420794 DCAF6Q58WW2 860 aa7.78□□□□□ -1.16
BDNF-209ENST00000420794 PPP1R26Q5T8A7 1209 aaPredicted RBP7.78□□□□□ -1.16
BDNF-209ENST00000420794 ARMCX6Q7L4S7 300 aa7.78□□□□□ -1.16
BDNF-209ENST00000420794 DNAAF5Q86Y56 855 aa7.78□□□□□ -1.16
BDNF-209ENST00000420794 WNT8BQ93098 351 aa7.78□□□□□ -1.16
BDNF-209ENST00000420794 PPP1R10Q96QC0 940 aaKnown RBP7.78□□□□□ -1.16
BDNF-209ENST00000420794 ACBD6Q9BR61 282 aa7.78□□□□□ -1.16
BDNF-209ENST00000420794 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.78□□□□□ -1.16
BDNF-209ENST00000420794 TTPALQ9BTX7 342 aa7.78□□□□□ -1.16
BDNF-209ENST00000420794 TRAIPQ9BWF2 469 aa7.78□□□□□ -1.16
BDNF-209ENST00000420794 SPG21Q9NZD8 308 aa7.78□□□□□ -1.16
BDNF-209ENST00000420794 ASIC3Q9UHC3 531 aa7.78□□□□□ -1.16
BDNF-209ENST00000420794 MRFAP1Q9Y605 127 aa7.78□□□□□ -1.16
BDNF-209ENST00000420794 PRLRP16471 622 aa7.78□□□□□ -1.16
BDNF-209ENST00000420794 SULT1E1P49888 294 aa7.78□□□□□ -1.16
BDNF-209ENST00000420794 CDR1P51861 262 aa7.78□□□□□ -1.16
BDNF-209ENST00000420794 NME3Q13232 169 aa7.78□□□□□ -1.16
BDNF-209ENST00000420794 SLC39A12Q504Y0 691 aa7.78□□□□□ -1.16
BDNF-209ENST00000420794 PLEKHG4Q58EX7 1191 aa7.78□□□□□ -1.16
BDNF-209ENST00000420794 PPP6R3Q5H9R7 873 aaPredicted RBP7.78□□□□□ -1.16
BDNF-209ENST00000420794 EFHC2Q5JST6 749 aa7.78□□□□□ -1.16
BDNF-209ENST00000420794 BZW1Q7L1Q6 419 aaKnown RBP7.78□□□□□ -1.16
BDNF-209ENST00000420794 ANKRD33Q7Z3H0 272 aa7.78□□□□□ -1.16
BDNF-209ENST00000420794 RCOR2Q8IZ40 523 aa7.78□□□□□ -1.16
BDNF-209ENST00000420794 CCDC89Q8N998 374 aa7.78□□□□□ -1.16
BDNF-209ENST00000420794 TTC13Q8NBP0 860 aa7.78□□□□□ -1.16
BDNF-209ENST00000420794 RSAD2Q8WXG1 361 aa7.78□□□□□ -1.16
BDNF-209ENST00000420794 PCDHB18PQ96TA0 734 aa7.78□□□□□ -1.16
BDNF-209ENST00000420794 TMEM175Q9BSA9 504 aa7.78□□□□□ -1.16
BDNF-209ENST00000420794 CNPY3Q9BT09 278 aa7.78□□□□□ -1.16
BDNF-209ENST00000420794 CARD9Q9H257 536 aa7.78□□□□□ -1.16
BDNF-209ENST00000420794 ZNF148Q9UQR1 794 aa7.78□□□□□ -1.16
BDNF-209ENST00000420794 REXO2Q9Y3B8 237 aaKnown RBP7.78□□□□□ -1.16
BDNF-209ENST00000420794 EVPLQ92817 2033 aa7.78□□□□□ -1.16
BDNF-209ENST00000420794 NT5C1B-RDH14C9J2C7 533 aa7.78□□□□□ -1.16
BDNF-209ENST00000420794 TIMP1P01033 207 aa7.78□□□□□ -1.16
BDNF-209ENST00000420794 CYP1A2P05177 515 aa7.78□□□□□ -1.16
BDNF-209ENST00000420794 ACRP10323 421 aa7.78□□□□□ -1.16
BDNF-209ENST00000420794 MMP8P22894 467 aa7.78□□□□□ -1.16
BDNF-209ENST00000420794 BDNFP23560 247 aa7.78□□□□□ -1.16
BDNF-209ENST00000420794 TUFMP49411 452 aaKnown RBP7.78□□□□□ -1.16
BDNF-209ENST00000420794 ASTE1Q2TB18 679 aaPredicted RBP7.78□□□□□ -1.16
BDNF-209ENST00000420794 TIGD5Q53EQ6 642 aa7.78□□□□□ -1.16
BDNF-209ENST00000420794 BOLA3Q53S33 107 aa7.78□□□□□ -1.16
BDNF-209ENST00000420794 RNF25Q96BH1 459 aaPredicted RBP7.78□□□□□ -1.16
BDNF-209ENST00000420794 RNPC3Q96LT9 517 aaKnown RBP7.78□□□□□ -1.16
BDNF-209ENST00000420794 DUSP16Q9BY84 665 aa7.78□□□□□ -1.16
BDNF-209ENST00000420794 MCOLN1Q9GZU1 580 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms