RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 CLIC6Q96NY7 704 aa13.83□□□□□ -0.2
LINC00339-203ENST00000420503 MTMR12Q9C0I1 747 aa13.83□□□□□ -0.2
LINC00339-203ENST00000420503 ST6GALNAC4Q9H4F1 302 aa13.83□□□□□ -0.2
LINC00339-203ENST00000420503 PCIF1Q9H4Z3 704 aa13.83□□□□□ -0.2
LINC00339-203ENST00000420503 KIF9Q9HAQ2 790 aa13.83□□□□□ -0.2
LINC00339-203ENST00000420503 PDE11AQ9HCR9 933 aa13.83□□□□□ -0.2
LINC00339-203ENST00000420503 VPS45Q9NRW7 570 aa13.83□□□□□ -0.2
LINC00339-203ENST00000420503 SNX9Q9Y5X1 595 aa13.83□□□□□ -0.2
LINC00339-203ENST00000420503 CLIC4Q9Y696 253 aa13.83□□□□□ -0.2
LINC00339-203ENST00000420503 ZZEF1O43149 2961 aa13.83□□□□□ -0.2
LINC00339-203ENST00000420503 PI4KAP42356 2102 aa13.82□□□□□ -0.2
LINC00339-203ENST00000420503 A0A087X0B3 334 aa13.82□□□□□ -0.2
LINC00339-203ENST00000420503 K7EQS6 105 aa13.82□□□□□ -0.2
LINC00339-203ENST00000420503 CAVIN2O95810 425 aa13.82□□□□□ -0.2
LINC00339-203ENST00000420503 KRT19P08727 400 aa13.82□□□□□ -0.2
LINC00339-203ENST00000420503 DDX6P26196 483 aaKnown RBP eCLIP13.82□□□□□ -0.2
LINC00339-203ENST00000420503 IFNAR2P48551 515 aa13.82□□□□□ -0.2
LINC00339-203ENST00000420503 FOXC1Q12948 553 aa13.82□□□□□ -0.2
LINC00339-203ENST00000420503 PTPAQ15257 358 aa13.82□□□□□ -0.2
LINC00339-203ENST00000420503 SOWAHAQ2M3V2 549 aa13.82□□□□□ -0.2
LINC00339-203ENST00000420503 SLFN12LQ6IEE8 588 aa13.82□□□□□ -0.2
LINC00339-203ENST00000420503 ANO7Q6IWH7 933 aa13.82□□□□□ -0.2
LINC00339-203ENST00000420503 C12orf40Q86WS4 652 aa13.82□□□□□ -0.2
LINC00339-203ENST00000420503 ADGRF2Q8IZF7 708 aa13.82□□□□□ -0.2
LINC00339-203ENST00000420503 CAMKK1Q8N5S9 505 aa13.82□□□□□ -0.2
LINC00339-203ENST00000420503 CSGALNACT2Q8N6G5 542 aa13.82□□□□□ -0.2
LINC00339-203ENST00000420503 MDGA1Q8NFP4 955 aa13.82□□□□□ -0.2
LINC00339-203ENST00000420503 OR5B17Q8NGF7 314 aa13.82□□□□□ -0.2
LINC00339-203ENST00000420503 USP33Q8TEY7 942 aa13.82□□□□□ -0.2
LINC00339-203ENST00000420503 LEO1Q8WVC0 666 aaPredicted RBP13.82□□□□□ -0.2
LINC00339-203ENST00000420503 KBTBD7Q8WVZ9 684 aa13.82□□□□□ -0.2
LINC00339-203ENST00000420503 RLN3Q8WXF3 142 aa13.82□□□□□ -0.2
LINC00339-203ENST00000420503 DDX1Q92499 740 aaKnown RBP13.82□□□□□ -0.2
LINC00339-203ENST00000420503 HPS3Q969F9 1004 aa13.82□□□□□ -0.2
LINC00339-203ENST00000420503 MYLPFQ96A32 169 aa13.82□□□□□ -0.2
LINC00339-203ENST00000420503 MYRFLQ96LU7 910 aa13.82□□□□□ -0.2
LINC00339-203ENST00000420503 ZNF560Q96MR9 790 aa13.82□□□□□ -0.2
LINC00339-203ENST00000420503 CRTAC1Q9NQ79 661 aa13.82□□□□□ -0.2
LINC00339-203ENST00000420503 FSCN3Q9NQT6 498 aa13.82□□□□□ -0.2
LINC00339-203ENST00000420503 TMEM30AQ9NV96 361 aa13.82□□□□□ -0.2
LINC00339-203ENST00000420503 RBAKQ9NYW8 714 aaPredicted RBP13.82□□□□□ -0.2
LINC00339-203ENST00000420503 PCDHGA5Q9Y5G8 931 aa13.82□□□□□ -0.2
LINC00339-203ENST00000420503 SPEGQ15772 3267 aa13.82□□□□□ -0.2
LINC00339-203ENST00000420503 ASPMQ8IZT6 3477 aa13.81□□□□□ -0.2
LINC00339-203ENST00000420503 TRAV19A0A0A6YYK7 116 aa13.81□□□□□ -0.2
LINC00339-203ENST00000420503 FOXD2O60548 495 aaPredicted RBP13.81□□□□□ -0.2
LINC00339-203ENST00000420503 AKAP3O75969 853 aa13.81□□□□□ -0.2
LINC00339-203ENST00000420503 IL18RAPO95256 599 aa13.81□□□□□ -0.2
LINC00339-203ENST00000420503 PAX3P23760 479 aa13.81□□□□□ -0.2
LINC00339-203ENST00000420503 LONP1P36776 959 aaKnown RBP13.81□□□□□ -0.2
LINC00339-203ENST00000420503 SLC6A11P48066 632 aa13.81□□□□□ -0.2
LINC00339-203ENST00000420503 CACNA2D1P54289 1103 aa13.81□□□□□ -0.2
LINC00339-203ENST00000420503 ZNF252P-AS1Q0IIN9 211 aa13.81□□□□□ -0.2
LINC00339-203ENST00000420503 SMARCB1Q12824 385 aa13.81□□□□□ -0.2
LINC00339-203ENST00000420503 NFE2Q16621 373 aaPredicted RBP13.81□□□□□ -0.2
LINC00339-203ENST00000420503 SH3PXD2AQ5TCZ1 1133 aa13.81□□□□□ -0.2
LINC00339-203ENST00000420503 EMC10Q5UCC4 262 aa13.81□□□□□ -0.2
LINC00339-203ENST00000420503 PMS2CLQ68D20 193 aa13.81□□□□□ -0.2
LINC00339-203ENST00000420503 TMEM92Q6UXU6 159 aa13.81□□□□□ -0.2
LINC00339-203ENST00000420503 ARMCX6Q7L4S7 300 aa13.81□□□□□ -0.2
LINC00339-203ENST00000420503 TTC30AQ86WT1 665 aa13.81□□□□□ -0.2
LINC00339-203ENST00000420503 KRI1Q8N9T8 703 aaKnown RBP13.81□□□□□ -0.2
LINC00339-203ENST00000420503 TSTD1Q8NFU3 115 aa13.81□□□□□ -0.2
LINC00339-203ENST00000420503 TRMT2BQ96GJ1 504 aaKnown RBP13.81□□□□□ -0.2
LINC00339-203ENST00000420503 ACBD6Q9BR61 282 aa13.81□□□□□ -0.2
LINC00339-203ENST00000420503 TMEM121BQ9BXQ6 578 aaPredicted RBP13.81□□□□□ -0.2
LINC00339-203ENST00000420503 MRPL44Q9H9J2 332 aaKnown RBP13.81□□□□□ -0.2
LINC00339-203ENST00000420503 SMPD4Q9NXE4 827 aa13.81□□□□□ -0.2
LINC00339-203ENST00000420503 WASF3Q9UPY6 502 aa13.81□□□□□ -0.2
LINC00339-203ENST00000420503 ATRXP46100 2492 aa13.81□□□□□ -0.2
LINC00339-203ENST00000420503 TNRC6BQ9UPQ9 1833 aaKnown RBP13.8□□□□□ -0.2
LINC00339-203ENST00000420503 ADAMTS9Q9P2N4 1935 aa13.8□□□□□ -0.2
LINC00339-203ENST00000420503 PCNX2A6NKB5 2137 aa13.8□□□□□ -0.2
LINC00339-203ENST00000420503 CDX4O14627 284 aaPredicted RBP13.8□□□□□ -0.2
LINC00339-203ENST00000420503 GABRDO14764 452 aa13.8□□□□□ -0.2
LINC00339-203ENST00000420503 SLC26A4O43511 780 aa13.8□□□□□ -0.2
LINC00339-203ENST00000420503 HUS1O60921 280 aa13.8□□□□□ -0.2
LINC00339-203ENST00000420503 PRPF6O94906 941 aaKnown RBP13.8□□□□□ -0.2
LINC00339-203ENST00000420503 GCNT3O95395 438 aa13.8□□□□□ -0.2
LINC00339-203ENST00000420503 CYP17A1P05093 508 aa13.8□□□□□ -0.2
LINC00339-203ENST00000420503 USP17L7P0C7H9 530 aa13.8□□□□□ -0.2
LINC00339-203ENST00000420503 BDNFP23560 247 aa13.8□□□□□ -0.2
LINC00339-203ENST00000420503 RPL10AP62906 217 aaKnown RBP13.8□□□□□ -0.2
LINC00339-203ENST00000420503 IRX4P78413 519 aa13.8□□□□□ -0.2
LINC00339-203ENST00000420503 RABEP1Q15276 862 aa13.8□□□□□ -0.2
LINC00339-203ENST00000420503 ELF2Q15723 593 aa13.8□□□□□ -0.2
LINC00339-203ENST00000420503 L1TD1Q5T7N2 865 aaKnown RBP13.8□□□□□ -0.2
LINC00339-203ENST00000420503 KIAA1211LQ6NV74 962 aa13.8□□□□□ -0.2
LINC00339-203ENST00000420503 SPATA2LQ8IUW3 424 aaPredicted RBP13.8□□□□□ -0.2
LINC00339-203ENST00000420503 ERLEC1Q96DZ1 483 aa13.8□□□□□ -0.2
LINC00339-203ENST00000420503 SYT15Q9BQS2 421 aa13.8□□□□□ -0.2
LINC00339-203ENST00000420503 PANK2Q9BZ23 570 aa13.8□□□□□ -0.2
LINC00339-203ENST00000420503 RNF38Q9H0F5 515 aa13.8□□□□□ -0.2
LINC00339-203ENST00000420503 TMEM206Q9H813 350 aa13.8□□□□□ -0.2
LINC00339-203ENST00000420503 ABCB6Q9NP58 842 aa13.8□□□□□ -0.2
LINC00339-203ENST00000420503 EBF1Q9UH73 591 aa13.8□□□□□ -0.2
LINC00339-203ENST00000420503 FBXO2Q9UK22 296 aaPredicted RBP13.8□□□□□ -0.2
LINC00339-203ENST00000420503 BAHCC1Q9P281 2608 aa13.8□□□□□ -0.2
LINC00339-203ENST00000420503 ATXN2Q99700 1313 aaKnown RBP13.8□□□□□ -0.2
LINC00339-203ENST00000420503 PKD1L2Q7Z442 2459 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms