RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 USP17L7P0C7H9 530 aa22.79■■□□□ 1.24
PTPN4-202ENST00000420482 LMO2P25791 158 aa22.79■■□□□ 1.24
PTPN4-202ENST00000420482 SOX9P48436 509 aa22.79■■□□□ 1.24
PTPN4-202ENST00000420482 PSMC1P62191 440 aaKnown RBP22.79■■□□□ 1.24
PTPN4-202ENST00000420482 SCARA3Q6AZY7 606 aa22.79■■□□□ 1.24
PTPN4-202ENST00000420482 TSSK4Q6SA08 328 aa22.79■■□□□ 1.24
PTPN4-202ENST00000420482 OR6B3Q8NGW1 331 aa22.79■■□□□ 1.24
PTPN4-202ENST00000420482 TTC8Q8TAM2 541 aa22.79■■□□□ 1.24
PTPN4-202ENST00000420482 MYCBPAPQ8TBZ2 947 aa22.79■■□□□ 1.24
PTPN4-202ENST00000420482 NELL1Q92832 810 aa22.79■■□□□ 1.24
PTPN4-202ENST00000420482 USP13Q92995 863 aaPredicted RBP22.79■■□□□ 1.24
PTPN4-202ENST00000420482 MYLPFQ96A32 169 aa22.79■■□□□ 1.24
PTPN4-202ENST00000420482 SPATA17Q96L03 361 aa22.79■■□□□ 1.24
PTPN4-202ENST00000420482 TRPC7Q9HCX4 862 aa22.79■■□□□ 1.24
PTPN4-202ENST00000420482 ACTN4O43707 911 aaKnown RBP22.78■■□□□ 1.24
PTPN4-202ENST00000420482 CST3P01034 146 aaPredicted RBP22.78■■□□□ 1.24
PTPN4-202ENST00000420482 CKMP06732 381 aa22.78■■□□□ 1.24
PTPN4-202ENST00000420482 PFKFB1P16118 471 aa22.78■■□□□ 1.24
PTPN4-202ENST00000420482 FAM160A1Q05DH4 1040 aa22.78■■□□□ 1.24
PTPN4-202ENST00000420482 BIRC3Q13489 604 aa22.78■■□□□ 1.24
PTPN4-202ENST00000420482 RUNX3Q13761 415 aa22.78■■□□□ 1.24
PTPN4-202ENST00000420482 PDGFRLQ15198 375 aa22.78■■□□□ 1.24
PTPN4-202ENST00000420482 GRAMD1CQ8IYS0 662 aa22.78■■□□□ 1.24
PTPN4-202ENST00000420482 KIAA2013Q8IYS2 634 aa22.78■■□□□ 1.24
PTPN4-202ENST00000420482 GPR161Q8N6U8 529 aaKnown RBP22.78■■□□□ 1.24
PTPN4-202ENST00000420482 SUMF1Q8NBK3 374 aa22.78■■□□□ 1.24
PTPN4-202ENST00000420482 RAB23Q9ULC3 237 aa22.78■■□□□ 1.24
PTPN4-202ENST00000420482 F5P12259 2224 aa22.78■■□□□ 1.24
PTPN4-202ENST00000420482 A0A1B0GVL5 298 aa22.77■■□□□ 1.24
PTPN4-202ENST00000420482 LILRB5O75023 590 aa22.77■■□□□ 1.24
PTPN4-202ENST00000420482 ATP2C2O75185 946 aa22.77■■□□□ 1.24
PTPN4-202ENST00000420482 BDNFP23560 247 aa22.77■■□□□ 1.24
PTPN4-202ENST00000420482 TNK2Q07912 1038 aa22.77■■□□□ 1.24
PTPN4-202ENST00000420482 KCNB1Q14721 858 aa22.77■■□□□ 1.24
PTPN4-202ENST00000420482 PON2Q15165 354 aa22.77■■□□□ 1.24
PTPN4-202ENST00000420482 DENND5BQ6ZUT9 1274 aa22.77■■□□□ 1.24
PTPN4-202ENST00000420482 STKLD1Q8NE28 680 aa22.77■■□□□ 1.24
PTPN4-202ENST00000420482 RMDN1Q96DB5 314 aa22.77■■□□□ 1.24
PTPN4-202ENST00000420482 CCDC34Q96HJ3 373 aa22.77■■□□□ 1.24
PTPN4-202ENST00000420482 FAM83CQ9BQN1 747 aa22.77■■□□□ 1.24
PTPN4-202ENST00000420482 SCAND2PQ9GZW5 306 aaPredicted RBP22.77■■□□□ 1.24
PTPN4-202ENST00000420482 EPC1Q9H2F5 836 aa22.77■■□□□ 1.24
PTPN4-202ENST00000420482 CRTAC1Q9NQ79 661 aa22.77■■□□□ 1.24
PTPN4-202ENST00000420482 PDXKO00764 312 aa22.76■■□□□ 1.23
PTPN4-202ENST00000420482 HCRTO43612 131 aa22.76■■□□□ 1.23
PTPN4-202ENST00000420482 PFKLP17858 780 aa22.76■■□□□ 1.23
PTPN4-202ENST00000420482 SYKP43405 635 aa22.76■■□□□ 1.23
PTPN4-202ENST00000420482 PPP3CCP48454 512 aa22.76■■□□□ 1.23
PTPN4-202ENST00000420482 GRSF1Q12849 480 aaKnown RBP eCLIP22.76■■□□□ 1.23
PTPN4-202ENST00000420482 STK4Q13043 487 aa22.76■■□□□ 1.23
PTPN4-202ENST00000420482 KMT5BQ4FZB7 885 aa22.76■■□□□ 1.23
PTPN4-202ENST00000420482 SLC9A9Q8IVB4 645 aa22.76■■□□□ 1.23
PTPN4-202ENST00000420482 PCED1BQ96HM7 432 aa22.76■■□□□ 1.23
PTPN4-202ENST00000420482 MRPL45Q9BRJ2 306 aaKnown RBP22.76■■□□□ 1.23
PTPN4-202ENST00000420482 ELOVL4Q9GZR5 314 aa22.76■■□□□ 1.23
PTPN4-202ENST00000420482 TRPM5Q9NZQ8 1165 aa22.76■■□□□ 1.23
PTPN4-202ENST00000420482 NXF1Q9UBU9 619 aaKnown RBP22.76■■□□□ 1.23
PTPN4-202ENST00000420482 CCL26Q9Y258 94 aa22.76■■□□□ 1.23
PTPN4-202ENST00000420482 DENND4CQ5VZ89 1909 aa22.76■■□□□ 1.23
PTPN4-202ENST00000420482 A8MXQ7 604 aa22.75■■□□□ 1.23
PTPN4-202ENST00000420482 KLRC4O43908 158 aa22.75■■□□□ 1.23
PTPN4-202ENST00000420482 P4HA1P13674 534 aa22.75■■□□□ 1.23
PTPN4-202ENST00000420482 MYL6P60660 151 aa22.75■■□□□ 1.23
PTPN4-202ENST00000420482 MTF1Q14872 753 aa22.75■■□□□ 1.23
PTPN4-202ENST00000420482 MDH1BQ5I0G3 518 aa22.75■■□□□ 1.23
PTPN4-202ENST00000420482 TXNDC11Q6PKC3 985 aa22.75■■□□□ 1.23
PTPN4-202ENST00000420482 CPA6Q8N4T0 437 aa22.75■■□□□ 1.23
PTPN4-202ENST00000420482 TMEM174Q8WUU8 243 aa22.75■■□□□ 1.23
PTPN4-202ENST00000420482 EBF3Q9H4W6 596 aa22.75■■□□□ 1.23
PTPN4-202ENST00000420482 SMG5Q9UPR3 1016 aaKnown RBP22.75■■□□□ 1.23
PTPN4-202ENST00000420482 FRMD4BQ9Y2L6 1034 aa22.75■■□□□ 1.23
PTPN4-202ENST00000420482 ATP8B3O60423 1300 aa22.75■■□□□ 1.23
PTPN4-202ENST00000420482 ZNF638Q14966 1978 aaKnown RBP22.74■■□□□ 1.23
PTPN4-202ENST00000420482 CALUO43852 315 aaPredicted RBP22.74■■□□□ 1.23
PTPN4-202ENST00000420482 ATG13O75143 517 aa22.74■■□□□ 1.23
PTPN4-202ENST00000420482 TADA3O75528 432 aa22.74■■□□□ 1.23
PTPN4-202ENST00000420482 PAPSS2O95340 614 aaPredicted RBP22.74■■□□□ 1.23
PTPN4-202ENST00000420482 PTPN1P18031 435 aaKnown RBP22.74■■□□□ 1.23
PTPN4-202ENST00000420482 HDCP19113 662 aa22.74■■□□□ 1.23
PTPN4-202ENST00000420482 TRIM21P19474 475 aaKnown RBP22.74■■□□□ 1.23
PTPN4-202ENST00000420482 IFNAR2P48551 515 aa22.74■■□□□ 1.23
PTPN4-202ENST00000420482 CCDC142Q17RM4 750 aa22.74■■□□□ 1.23
PTPN4-202ENST00000420482 ZNF699Q32M78 642 aa22.74■■□□□ 1.23
PTPN4-202ENST00000420482 ZNF667Q5HYK9 610 aa22.74■■□□□ 1.23
PTPN4-202ENST00000420482 KIAA0895Q8NCT3 520 aa22.74■■□□□ 1.23
PTPN4-202ENST00000420482 PARD3BQ8TEW8 1205 aa22.74■■□□□ 1.23
PTPN4-202ENST00000420482 ZNF516Q92618 1163 aa22.74■■□□□ 1.23
PTPN4-202ENST00000420482 TNIP3Q96KP6 325 aa22.74■■□□□ 1.23
PTPN4-202ENST00000420482 C8orf48Q96LL4 319 aa22.74■■□□□ 1.23
PTPN4-202ENST00000420482 VRTNQ9H8Y1 702 aa22.74■■□□□ 1.23
PTPN4-202ENST00000420482 RBM12Q9NTZ6 932 aaKnown RBP22.74■■□□□ 1.23
PTPN4-202ENST00000420482 GMEB2Q9UKD1 530 aa22.74■■□□□ 1.23
PTPN4-202ENST00000420482 HPSEQ9Y251 543 aa22.74■■□□□ 1.23
PTPN4-202ENST00000420482 OBSL1O75147 1896 aa22.74■■□□□ 1.23
PTPN4-202ENST00000420482 DNAH14Q0VDD8 3507 aa22.73■■□□□ 1.23
PTPN4-202ENST00000420482 RPN1P04843 607 aaKnown RBP22.73■■□□□ 1.23
PTPN4-202ENST00000420482 CNR2P34972 360 aa22.73■■□□□ 1.23
PTPN4-202ENST00000420482 NOP14P78316 857 aaKnown RBP22.73■■□□□ 1.23
PTPN4-202ENST00000420482 SATB1Q01826 763 aa22.73■■□□□ 1.23
PTPN4-202ENST00000420482 NR1H3Q13133 447 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms