RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 NOL4O94818 638 aa22.77■■□□□ 1.24
CPNE1-211ENST00000420363 HMGA1P17096 107 aaKnown RBP22.77■■□□□ 1.24
CPNE1-211ENST00000420363 FCARP24071 287 aa22.77■■□□□ 1.24
CPNE1-211ENST00000420363 GABRR2P28476 465 aa22.77■■□□□ 1.24
CPNE1-211ENST00000420363 RAP1GAPP47736 663 aa22.77■■□□□ 1.24
CPNE1-211ENST00000420363 CDH8P55286 799 aa22.77■■□□□ 1.24
CPNE1-211ENST00000420363 ARHGAP15Q53QZ3 475 aa22.77■■□□□ 1.24
CPNE1-211ENST00000420363 TCERG1LQ5VWI1 586 aa22.77■■□□□ 1.24
CPNE1-211ENST00000420363 SPOPLQ6IQ16 392 aa22.77■■□□□ 1.24
CPNE1-211ENST00000420363 GPR152Q8TDT2 470 aa22.77■■□□□ 1.24
CPNE1-211ENST00000420363 GIPC2Q8TF65 315 aa22.77■■□□□ 1.24
CPNE1-211ENST00000420363 SMARCD2Q92925 531 aa22.77■■□□□ 1.24
CPNE1-211ENST00000420363 SPATA17Q96L03 361 aa22.77■■□□□ 1.24
CPNE1-211ENST00000420363 MYRFLQ96LU7 910 aa22.77■■□□□ 1.24
CPNE1-211ENST00000420363 NUP62CLQ9H1M0 184 aa22.77■■□□□ 1.24
CPNE1-211ENST00000420363 DPEP3Q9H4B8 488 aa22.77■■□□□ 1.24
CPNE1-211ENST00000420363 TBC1D17Q9HA65 648 aa22.77■■□□□ 1.24
CPNE1-211ENST00000420363 APOBEC3GQ9HC16 384 aaKnown RBP22.77■■□□□ 1.24
CPNE1-211ENST00000420363 GOLGA6L22H0YM25 854 aa22.76■■□□□ 1.23
CPNE1-211ENST00000420363 TRIM66O15016 1216 aa22.76■■□□□ 1.23
CPNE1-211ENST00000420363 PMM2O15305 246 aa22.76■■□□□ 1.23
CPNE1-211ENST00000420363 GNA14O95837 355 aa22.76■■□□□ 1.23
CPNE1-211ENST00000420363 WEE1P30291 646 aa22.76■■□□□ 1.23
CPNE1-211ENST00000420363 GPR15P49685 360 aa22.76■■□□□ 1.23
CPNE1-211ENST00000420363 CDR1P51861 262 aa22.76■■□□□ 1.23
CPNE1-211ENST00000420363 CYP27A1Q02318 531 aa22.76■■□□□ 1.23
CPNE1-211ENST00000420363 FAM78AQ5JUQ0 283 aa22.76■■□□□ 1.23
CPNE1-211ENST00000420363 ST13P5Q8NFI4 369 aaPredicted RBP22.76■■□□□ 1.23
CPNE1-211ENST00000420363 ATXN3LQ9H3M9 355 aa22.76■■□□□ 1.23
CPNE1-211ENST00000420363 RAB20Q9NX57 234 aa22.76■■□□□ 1.23
CPNE1-211ENST00000420363 ATP8B3O60423 1300 aa22.76■■□□□ 1.23
CPNE1-211ENST00000420363 SOBPA7XYQ1 873 aa22.75■■□□□ 1.23
CPNE1-211ENST00000420363 GJA1P17302 382 aa22.75■■□□□ 1.23
CPNE1-211ENST00000420363 TRIM21P19474 475 aaKnown RBP22.75■■□□□ 1.23
CPNE1-211ENST00000420363 BDNFP23560 247 aa22.75■■□□□ 1.23
CPNE1-211ENST00000420363 DDX6P26196 483 aaKnown RBP eCLIP22.75■■□□□ 1.239e-13■■■■□ 25.3
CPNE1-211ENST00000420363 MARSP56192 900 aaKnown RBP22.75■■□□□ 1.23
CPNE1-211ENST00000420363 CCDC40Q4G0X9 1142 aa22.75■■□□□ 1.23
CPNE1-211ENST00000420363 CBWD6Q4V339 395 aa22.75■■□□□ 1.23
CPNE1-211ENST00000420363 CBWD3Q5JTY5 395 aa22.75■■□□□ 1.23
CPNE1-211ENST00000420363 CBWD5Q5RIA9 395 aa22.75■■□□□ 1.23
CPNE1-211ENST00000420363 TTC39CQ8N584 583 aa22.75■■□□□ 1.23
CPNE1-211ENST00000420363 MLKLQ8NB16 471 aa22.75■■□□□ 1.23
CPNE1-211ENST00000420363 ZSCAN18Q8TBC5 510 aaPredicted RBP22.75■■□□□ 1.23
CPNE1-211ENST00000420363 E2F7Q96AV8 911 aa22.75■■□□□ 1.23
CPNE1-211ENST00000420363 C8orf48Q96LL4 319 aa22.75■■□□□ 1.23
CPNE1-211ENST00000420363 KXD1Q9BQD3 176 aa22.75■■□□□ 1.23
CPNE1-211ENST00000420363 RPP25Q9BUL9 199 aaKnown RBP22.75■■□□□ 1.23
CPNE1-211ENST00000420363 SLITRK6Q9H5Y7 841 aa22.75■■□□□ 1.23
CPNE1-211ENST00000420363 ZFP14Q9HCL3 533 aa22.75■■□□□ 1.23
CPNE1-211ENST00000420363 ARHGEF3Q9NR81 526 aa22.75■■□□□ 1.23
CPNE1-211ENST00000420363 RWDD2AQ9UIY3 292 aa22.75■■□□□ 1.23
CPNE1-211ENST00000420363 VPS13AQ96RL7 3174 aa22.74■■□□□ 1.23
CPNE1-211ENST00000420363 FGFR1OPO95684 399 aaKnown RBP22.74■■□□□ 1.23
CPNE1-211ENST00000420363 ANXA13P27216 316 aa22.74■■□□□ 1.23
CPNE1-211ENST00000420363 NLRP12P59046 1061 aa22.74■■□□□ 1.23
CPNE1-211ENST00000420363 DDR2Q16832 855 aa22.74■■□□□ 1.23
CPNE1-211ENST00000420363 PHLDB3Q6NSJ2 640 aa22.74■■□□□ 1.23
CPNE1-211ENST00000420363 SCN4BQ8IWT1 228 aa22.74■■□□□ 1.23
CPNE1-211ENST00000420363 CRYBG2Q8N1P7 616 aa22.74■■□□□ 1.23
CPNE1-211ENST00000420363 SEMA4DQ92854 862 aa22.74■■□□□ 1.23
CPNE1-211ENST00000420363 ELMO3Q96BJ8 720 aa22.74■■□□□ 1.23
CPNE1-211ENST00000420363 ZSWIM3Q96MP5 696 aa22.74■■□□□ 1.23
CPNE1-211ENST00000420363 EHD2Q9NZN4 543 aa22.74■■□□□ 1.23
CPNE1-211ENST00000420363 SIT1Q9Y3P8 196 aa22.74■■□□□ 1.23
CPNE1-211ENST00000420363 SLC38A8A6NNN8 435 aa22.73■■□□□ 1.23
CPNE1-211ENST00000420363 F11P03951 625 aa22.73■■□□□ 1.23
CPNE1-211ENST00000420363 NDST1P52848 882 aa22.73■■□□□ 1.23
CPNE1-211ENST00000420363 PFKPQ01813 784 aa22.73■■□□□ 1.23
CPNE1-211ENST00000420363 WDR44Q5JSH3 913 aa22.73■■□□□ 1.23
CPNE1-211ENST00000420363 SDHAF4Q5VUM1 108 aa22.73■■□□□ 1.23
CPNE1-211ENST00000420363 TANGO2Q6ICL3 276 aa22.73■■□□□ 1.23
CPNE1-211ENST00000420363 TMEM150AQ86TG1 271 aa22.73■■□□□ 1.23
CPNE1-211ENST00000420363 DEPDC1BQ8WUY9 529 aa22.73■■□□□ 1.23
CPNE1-211ENST00000420363 SHDQ96IW2 340 aa22.73■■□□□ 1.23
CPNE1-211ENST00000420363 DNAI2Q9GZS0 605 aa22.73■■□□□ 1.23
CPNE1-211ENST00000420363 TASP1Q9H6P5 420 aa22.73■■□□□ 1.23
CPNE1-211ENST00000420363 HMGXB4Q9UGU5 601 aa22.73■■□□□ 1.23
CPNE1-211ENST00000420363 FAM186AA6NE01 2351 aa22.73■■□□□ 1.23
CPNE1-211ENST00000420363 DMDP11532 3685 aa22.73■■□□□ 1.23
CPNE1-211ENST00000420363 P4HA2O15460 535 aa22.72■■□□□ 1.23
CPNE1-211ENST00000420363 CILPO75339 1184 aa22.72■■□□□ 1.23
CPNE1-211ENST00000420363 DCNP07585 359 aaKnown RBP22.72■■□□□ 1.23
CPNE1-211ENST00000420363 GRIK1P39086 918 aa22.72■■□□□ 1.23
CPNE1-211ENST00000420363 FMO5P49326 533 aa22.72■■□□□ 1.23
CPNE1-211ENST00000420363 STX17P56962 302 aa22.72■■□□□ 1.23
CPNE1-211ENST00000420363 STXBP5Q5T5C0 1151 aa22.72■■□□□ 1.23
CPNE1-211ENST00000420363 GPR158Q5T848 1215 aa22.72■■□□□ 1.23
CPNE1-211ENST00000420363 DENND5BQ6ZUT9 1274 aa22.72■■□□□ 1.23
CPNE1-211ENST00000420363 FAM35AQ86V20 835 aa22.72■■□□□ 1.23
CPNE1-211ENST00000420363 SMARCD1Q96GM5 515 aa22.72■■□□□ 1.23
CPNE1-211ENST00000420363 TTLL2Q9BWV7 592 aa22.72■■□□□ 1.23
CPNE1-211ENST00000420363 B3GNT5Q9BYG0 378 aa22.72■■□□□ 1.23
CPNE1-211ENST00000420363 ZNF518BQ9C0D4 1074 aa22.72■■□□□ 1.23
CPNE1-211ENST00000420363 OBP2AQ9NY56 170 aa22.72■■□□□ 1.23
CPNE1-211ENST00000420363 PATJQ8NI35 1801 aa22.72■■□□□ 1.23
CPNE1-211ENST00000420363 KIF26AQ9ULI4 1882 aaPredicted RBP22.72■■□□□ 1.23
CPNE1-211ENST00000420363 COL4A2P08572 1712 aa22.71■■□□□ 1.23
CPNE1-211ENST00000420363 ZNF638Q14966 1978 aaKnown RBP22.71■■□□□ 1.23
CPNE1-211ENST00000420363 F8VP50 259 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms