RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 ADSSL1Q8N142 457 aa11.81□□□□□ -0.52
SSBP3-206ENST00000420121 CELF5Q8N6W0 485 aaKnown RBP11.81□□□□□ -0.52
SSBP3-206ENST00000420121 SUMF1Q8NBK3 374 aa11.81□□□□□ -0.52
SSBP3-206ENST00000420121 ZBTB44Q8NCP5 570 aa11.81□□□□□ -0.52
SSBP3-206ENST00000420121 PCED1BQ96HM7 432 aa11.81□□□□□ -0.52
SSBP3-206ENST00000420121 GCNAQ96QF7 691 aa11.81□□□□□ -0.52
SSBP3-206ENST00000420121 FNBP1Q96RU3 617 aa11.81□□□□□ -0.52
SSBP3-206ENST00000420121 SLC22A12Q96S37 553 aa11.81□□□□□ -0.52
SSBP3-206ENST00000420121 FAM83CQ9BQN1 747 aa11.81□□□□□ -0.52
SSBP3-206ENST00000420121 SEMA4AQ9H3S1 761 aa11.81□□□□□ -0.52
SSBP3-206ENST00000420121 VRTNQ9H8Y1 702 aa11.81□□□□□ -0.52
SSBP3-206ENST00000420121 LMAN1LQ9HAT1 526 aa11.81□□□□□ -0.52
SSBP3-206ENST00000420121 HPS4Q9NQG7 708 aa11.81□□□□□ -0.52
SSBP3-206ENST00000420121 EXOC1Q9NV70 894 aa11.81□□□□□ -0.52
SSBP3-206ENST00000420121 USP25Q9UHP3 1055 aa11.81□□□□□ -0.52
SSBP3-206ENST00000420121 ZMYM5Q9UJ78 669 aa11.81□□□□□ -0.52
SSBP3-206ENST00000420121 MAGED2Q9UNF1 606 aaPredicted RBP11.81□□□□□ -0.52
SSBP3-206ENST00000420121 OTOL1A6NHN0 477 aaPredicted RBP11.8□□□□□ -0.52
SSBP3-206ENST00000420121 PDXKO00764 312 aa11.8□□□□□ -0.52
SSBP3-206ENST00000420121 EXOC3O60645 756 aa11.8□□□□□ -0.52
SSBP3-206ENST00000420121 LILRB5O75023 590 aa11.8□□□□□ -0.52
SSBP3-206ENST00000420121 LMNAP02545 664 aaKnown RBP11.8□□□□□ -0.52
SSBP3-206ENST00000420121 C4BPAP04003 597 aaKnown RBP11.8□□□□□ -0.52
SSBP3-206ENST00000420121 MYL1P05976 194 aa11.8□□□□□ -0.52
SSBP3-206ENST00000420121 FAM163BP0C2L3 166 aa11.8□□□□□ -0.52
SSBP3-206ENST00000420121 BDNFP23560 247 aa11.8□□□□□ -0.52
SSBP3-206ENST00000420121 DDX6P26196 483 aaKnown RBP eCLIP11.8□□□□□ -0.52
SSBP3-206ENST00000420121 CACNA2D1P54289 1103 aa11.8□□□□□ -0.52
SSBP3-206ENST00000420121 USP46P62068 366 aa11.8□□□□□ -0.52
SSBP3-206ENST00000420121 DLG4P78352 724 aa11.8□□□□□ -0.52
SSBP3-206ENST00000420121 CSTF1Q05048 431 aaKnown RBP11.8□□□□□ -0.52
SSBP3-206ENST00000420121 DPYDQ12882 1025 aa11.8□□□□□ -0.52
SSBP3-206ENST00000420121 GSE1Q14687 1217 aa11.8□□□□□ -0.52
SSBP3-206ENST00000420121 TAF12Q16514 161 aa11.8□□□□□ -0.52
SSBP3-206ENST00000420121 WDR72Q3MJ13 1102 aa11.8□□□□□ -0.52
SSBP3-206ENST00000420121 C4orf50Q6ZRC1 276 aa11.8□□□□□ -0.52
SSBP3-206ENST00000420121 SCN4BQ8IWT1 228 aa11.8□□□□□ -0.52
SSBP3-206ENST00000420121 TTC8Q8TAM2 541 aa11.8□□□□□ -0.52
SSBP3-206ENST00000420121 MYCBPAPQ8TBZ2 947 aa11.8□□□□□ -0.52
SSBP3-206ENST00000420121 CSGALNACT1Q8TDX6 532 aa11.8□□□□□ -0.52
SSBP3-206ENST00000420121 ELMO3Q96BJ8 720 aa11.8□□□□□ -0.52
SSBP3-206ENST00000420121 MSANTD3Q96H12 275 aa11.8□□□□□ -0.52
SSBP3-206ENST00000420121 SPATA17Q96L03 361 aa11.8□□□□□ -0.52
SSBP3-206ENST00000420121 MMS19Q96T76 1030 aa11.8□□□□□ -0.52
SSBP3-206ENST00000420121 DPEP3Q9H4B8 488 aa11.8□□□□□ -0.52
SSBP3-206ENST00000420121 C8orf33Q9H7E9 229 aaPredicted RBP11.8□□□□□ -0.52
SSBP3-206ENST00000420121 RBM12Q9NTZ6 932 aaKnown RBP11.8□□□□□ -0.52
SSBP3-206ENST00000420121 GCNT4Q9P109 453 aa11.8□□□□□ -0.52
SSBP3-206ENST00000420121 CEP250Q9BV73 2442 aa11.79□□□□□ -0.52
SSBP3-206ENST00000420121 MYOFQ9NZM1 2061 aa11.79□□□□□ -0.52
SSBP3-206ENST00000420121 A0A1W2PQ27 194 aa11.79□□□□□ -0.52
SSBP3-206ENST00000420121 A0A1W2PQ64 194 aa11.79□□□□□ -0.52
SSBP3-206ENST00000420121 A0A1W2PQD8 194 aa11.79□□□□□ -0.52
SSBP3-206ENST00000420121 DPYSL4O14531 572 aa11.79□□□□□ -0.52
SSBP3-206ENST00000420121 RHOBTB3O94955 611 aa11.79□□□□□ -0.52
SSBP3-206ENST00000420121 RPN1P04843 607 aaKnown RBP11.79□□□□□ -0.52
SSBP3-206ENST00000420121 ATICP31939 592 aa11.79□□□□□ -0.52
SSBP3-206ENST00000420121 GNL1P36915 607 aaPredicted RBP11.79□□□□□ -0.52
SSBP3-206ENST00000420121 SYKP43405 635 aa11.79□□□□□ -0.52
SSBP3-206ENST00000420121 USP4Q13107 963 aa11.79□□□□□ -0.52
SSBP3-206ENST00000420121 CCINQ13939 588 aa11.79□□□□□ -0.52
SSBP3-206ENST00000420121 ZNF268Q14587 947 aaPredicted RBP11.79□□□□□ -0.52
SSBP3-206ENST00000420121 MDH1BQ5I0G3 518 aa11.79□□□□□ -0.52
SSBP3-206ENST00000420121 TRIM68Q6AZZ1 485 aa11.79□□□□□ -0.52
SSBP3-206ENST00000420121 ZC3H14Q6PJT7 736 aaKnown RBP11.79□□□□□ -0.52
SSBP3-206ENST00000420121 VSTM1Q6UX27 236 aa11.79□□□□□ -0.52
SSBP3-206ENST00000420121 KRBA2Q6ZNG9 492 aa11.79□□□□□ -0.52
SSBP3-206ENST00000420121 Q6ZS52 159 aa11.79□□□□□ -0.52
SSBP3-206ENST00000420121 RALGPS2Q86X27 583 aaPredicted RBP11.79□□□□□ -0.52
SSBP3-206ENST00000420121 GOLGA5Q8TBA6 731 aa11.79□□□□□ -0.52
SSBP3-206ENST00000420121 MRPS31Q92665 395 aaKnown RBP11.79□□□□□ -0.52
SSBP3-206ENST00000420121 TTLL2Q9BWV7 592 aa11.79□□□□□ -0.52
SSBP3-206ENST00000420121 SDCBP2Q9H190 292 aa11.79□□□□□ -0.52
SSBP3-206ENST00000420121 SMYD3Q9H7B4 428 aa11.79□□□□□ -0.52
SSBP3-206ENST00000420121 GDPD2Q9HCC8 539 aa11.79□□□□□ -0.52
SSBP3-206ENST00000420121 GKN1Q9NS71 199 aa11.79□□□□□ -0.52
SSBP3-206ENST00000420121 TDP1Q9NUW8 608 aa11.79□□□□□ -0.52
SSBP3-206ENST00000420121 C2orf42Q9NWW7 574 aa11.79□□□□□ -0.52
SSBP3-206ENST00000420121 MAGEC2Q9UBF1 373 aaPredicted RBP11.79□□□□□ -0.52
SSBP3-206ENST00000420121 UXTQ9UBK9 157 aaPredicted RBP11.79□□□□□ -0.52
SSBP3-206ENST00000420121 TRAF3IP3Q9Y228 551 aa11.79□□□□□ -0.52
SSBP3-206ENST00000420121 CACNA1AO00555 2505 aa11.79□□□□□ -0.52
SSBP3-206ENST00000420121 C2orf78A6NCI8 922 aa11.78□□□□□ -0.52
SSBP3-206ENST00000420121 NR3C1P04150 777 aa11.78□□□□□ -0.52
SSBP3-206ENST00000420121 PTPN1P18031 435 aaKnown RBP11.78□□□□□ -0.52
SSBP3-206ENST00000420121 HOXC13P31276 330 aa11.78□□□□□ -0.52
SSBP3-206ENST00000420121 AVPR1AP37288 418 aa11.78□□□□□ -0.52
SSBP3-206ENST00000420121 KPNA1P52294 538 aaPredicted RBP11.78□□□□□ -0.52
SSBP3-206ENST00000420121 CDH8P55286 799 aa11.78□□□□□ -0.52
SSBP3-206ENST00000420121 ZXDBP98169 803 aa11.78□□□□□ -0.52
SSBP3-206ENST00000420121 PON2Q15165 354 aa11.78□□□□□ -0.52
SSBP3-206ENST00000420121 MAPRE1Q15691 268 aaKnown RBP11.78□□□□□ -0.52
SSBP3-206ENST00000420121 ZNF77Q15935 545 aa11.78□□□□□ -0.52
SSBP3-206ENST00000420121 ZACNQ401N2 412 aa11.78□□□□□ -0.52
SSBP3-206ENST00000420121 PAQR9Q6ZVX9 377 aa11.78□□□□□ -0.52
SSBP3-206ENST00000420121 FSIP1Q8NA03 581 aa11.78□□□□□ -0.52
SSBP3-206ENST00000420121 OR6B3Q8NGW1 331 aa11.78□□□□□ -0.52
SSBP3-206ENST00000420121 CEP295NLQ96MC4 621 aa11.78□□□□□ -0.52
SSBP3-206ENST00000420121 CYP2S1Q96SQ9 504 aa11.78□□□□□ -0.52
SSBP3-206ENST00000420121 IER2Q9BTL4 223 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms