RNA–Protein interactions for RNA: ENST00000418378.5

SPARCL1-202, Transcript of SPARC like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SPARCL1, Length 2,994 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-202ENST00000418378 TRAPPC11Q7Z392 1133 aa6.03□□□□□ -1.44
SPARCL1-202ENST00000418378 CCDC50Q8IVM0 306 aa6.03□□□□□ -1.44
SPARCL1-202ENST00000418378 SLC44A2Q8IWA5 706 aaPredicted RBP6.03□□□□□ -1.44
SPARCL1-202ENST00000418378 GOLGA5Q8TBA6 731 aa6.03□□□□□ -1.44
SPARCL1-202ENST00000418378 LRRN4Q8WUT4 740 aa6.03□□□□□ -1.44
SPARCL1-202ENST00000418378 SGCDQ92629 289 aa6.03□□□□□ -1.44
SPARCL1-202ENST00000418378 CYFIP2Q96F07 1278 aa6.03□□□□□ -1.44
SPARCL1-202ENST00000418378 PCDHB18PQ96TA0 734 aa6.03□□□□□ -1.44
SPARCL1-202ENST00000418378 KATNBL1Q9H079 304 aa6.03□□□□□ -1.44
SPARCL1-202ENST00000418378 PSD3Q9NYI0 1048 aa6.03□□□□□ -1.44
SPARCL1-202ENST00000418378 MORF4L1Q9UBU8 362 aa6.03□□□□□ -1.44
SPARCL1-202ENST00000418378 TUBGCP4Q9UGJ1 667 aa6.03□□□□□ -1.44
SPARCL1-202ENST00000418378 GJD2Q9UKL4 321 aa6.03□□□□□ -1.44
SPARCL1-202ENST00000418378 LOXHD1Q8IVV2 1947 aa6.03□□□□□ -1.44
SPARCL1-202ENST00000418378 COL6A3P12111 3177 aa6.03□□□□□ -1.44
SPARCL1-202ENST00000418378 KNL1Q8NG31 2342 aa6.03□□□□□ -1.44
SPARCL1-202ENST00000418378 IGKV6D-21A0A0A0MT36 114 aa6.03□□□□□ -1.44
SPARCL1-202ENST00000418378 A0A0B4J269 797 aa6.03□□□□□ -1.44
SPARCL1-202ENST00000418378 CASTOR2A6NHX0 329 aa6.03□□□□□ -1.44
SPARCL1-202ENST00000418378 EXTL3O43909 919 aa6.03□□□□□ -1.44
SPARCL1-202ENST00000418378 CEP104O60308 925 aa6.03□□□□□ -1.44
SPARCL1-202ENST00000418378 MAP3K6O95382 1288 aa6.03□□□□□ -1.44
SPARCL1-202ENST00000418378 VNN1O95497 513 aa6.03□□□□□ -1.44
SPARCL1-202ENST00000418378 GNRH1P01148 92 aa6.03□□□□□ -1.44
SPARCL1-202ENST00000418378 RFC5P40937 340 aa6.03□□□□□ -1.44
SPARCL1-202ENST00000418378 MARCKSL1P49006 195 aa6.03□□□□□ -1.44
SPARCL1-202ENST00000418378 PSEN2P49810 448 aa6.03□□□□□ -1.44
SPARCL1-202ENST00000418378 GPC3P51654 580 aa6.03□□□□□ -1.44
SPARCL1-202ENST00000418378 VAC14Q08AM6 782 aa6.03□□□□□ -1.44
SPARCL1-202ENST00000418378 NCBP1Q09161 790 aaKnown RBP6.03□□□□□ -1.44
SPARCL1-202ENST00000418378 TFDP1Q14186 410 aa6.03□□□□□ -1.44
SPARCL1-202ENST00000418378 SLC18A3Q16572 532 aa6.03□□□□□ -1.44
SPARCL1-202ENST00000418378 CCNG2Q16589 344 aa6.03□□□□□ -1.44
SPARCL1-202ENST00000418378 ZNF618Q5T7W0 954 aa6.03□□□□□ -1.44
SPARCL1-202ENST00000418378 GDF6Q6KF10 455 aaPredicted RBP6.03□□□□□ -1.44
SPARCL1-202ENST00000418378 CTU1Q7Z7A3 348 aaKnown RBP6.03□□□□□ -1.44
SPARCL1-202ENST00000418378 VPS36Q86VN1 386 aa6.03□□□□□ -1.44
SPARCL1-202ENST00000418378 NETO2Q8NC67 525 aa6.03□□□□□ -1.44
SPARCL1-202ENST00000418378 SHCBP1Q8NEM2 672 aa6.03□□□□□ -1.44
SPARCL1-202ENST00000418378 RDM1Q8NG50 284 aa6.03□□□□□ -1.44
SPARCL1-202ENST00000418378 ZNF296Q8WUU4 475 aaPredicted RBP6.03□□□□□ -1.44
SPARCL1-202ENST00000418378 ZNF653Q96CK0 615 aa6.03□□□□□ -1.44
SPARCL1-202ENST00000418378 CCDC51Q96ER9 411 aa6.03□□□□□ -1.44
SPARCL1-202ENST00000418378 ADPGKQ9BRR6 497 aa6.03□□□□□ -1.44
SPARCL1-202ENST00000418378 STRA6Q9BX79 667 aa6.03□□□□□ -1.44
SPARCL1-202ENST00000418378 NAA15Q9BXJ9 866 aaKnown RBP6.03□□□□□ -1.44
SPARCL1-202ENST00000418378 MAK16Q9BXY0 300 aaKnown RBP6.03□□□□□ -1.44
SPARCL1-202ENST00000418378 NIFKQ9BYG3 293 aaKnown RBP6.03□□□□□ -1.44
SPARCL1-202ENST00000418378 SMYD3Q9H7B4 428 aa6.03□□□□□ -1.44
SPARCL1-202ENST00000418378 PDE2AO00408 941 aaPredicted RBP6.02□□□□□ -1.45
SPARCL1-202ENST00000418378 SLC16A3O15427 465 aaKnown RBP6.02□□□□□ -1.45
SPARCL1-202ENST00000418378 PQBP1O60828 265 aaKnown RBP6.02□□□□□ -1.45
SPARCL1-202ENST00000418378 TACC1O75410 805 aa6.02□□□□□ -1.45
SPARCL1-202ENST00000418378 VIMP08670 466 aaKnown RBP6.02□□□□□ -1.45
SPARCL1-202ENST00000418378 H2AFZP0C0S5 128 aa6.02□□□□□ -1.45
SPARCL1-202ENST00000418378 AKR1A1P14550 325 aa6.02□□□□□ -1.45
SPARCL1-202ENST00000418378 GTF2H1P32780 548 aa6.02□□□□□ -1.45
SPARCL1-202ENST00000418378 KRT20P35900 424 aa6.02□□□□□ -1.45
SPARCL1-202ENST00000418378 VPS41P49754 854 aa6.02□□□□□ -1.45
SPARCL1-202ENST00000418378 PDE6CP51160 858 aa6.02□□□□□ -1.45
SPARCL1-202ENST00000418378 PTENP60484 403 aa6.02□□□□□ -1.45
SPARCL1-202ENST00000418378 NOGQ13253 232 aa6.02□□□□□ -1.45
SPARCL1-202ENST00000418378 SEPT7Q16181 437 aaKnown RBP6.02□□□□□ -1.45
SPARCL1-202ENST00000418378 CDO1Q16878 200 aa6.02□□□□□ -1.45
SPARCL1-202ENST00000418378 MFSD14CQ5VZR4 134 aa6.02□□□□□ -1.45
SPARCL1-202ENST00000418378 KAZNQ674X7 775 aa6.02□□□□□ -1.45
SPARCL1-202ENST00000418378 HIBCHQ6NVY1 386 aaPredicted RBP6.02□□□□□ -1.45
SPARCL1-202ENST00000418378 TMCO3Q6UWJ1 677 aa6.02□□□□□ -1.45
SPARCL1-202ENST00000418378 H2AFVQ71UI9 128 aa6.02□□□□□ -1.45
SPARCL1-202ENST00000418378 FAM9CQ8IZT9 166 aa6.02□□□□□ -1.45
SPARCL1-202ENST00000418378 KRT222Q8N1A0 295 aa6.02□□□□□ -1.45
SPARCL1-202ENST00000418378 ZNF710Q8N1W2 664 aa6.02□□□□□ -1.45
SPARCL1-202ENST00000418378 PPM1NQ8N819 430 aa6.02□□□□□ -1.45
SPARCL1-202ENST00000418378 LMO3Q8TAP4 145 aa6.02□□□□□ -1.45
SPARCL1-202ENST00000418378 TCP11Q8WWU5 503 aa6.02□□□□□ -1.45
SPARCL1-202ENST00000418378 CTNNBL1Q8WYA6 563 aaPredicted RBP6.02□□□□□ -1.45
SPARCL1-202ENST00000418378 ARHGEF2Q92974 986 aaKnown RBP6.02□□□□□ -1.45
SPARCL1-202ENST00000418378 TRMT2BQ96GJ1 504 aaKnown RBP6.02□□□□□ -1.45
SPARCL1-202ENST00000418378 GPR88Q9GZN0 384 aa6.02□□□□□ -1.45
SPARCL1-202ENST00000418378 SYNCQ9H7C4 482 aa6.02□□□□□ -1.45
SPARCL1-202ENST00000418378 MYO6Q9UM54 1294 aa6.02□□□□□ -1.45
SPARCL1-202ENST00000418378 EIF3CLB5ME19 914 aaKnown RBP6.02□□□□□ -1.45
SPARCL1-202ENST00000418378 O00370 1275 aa6.02□□□□□ -1.45
SPARCL1-202ENST00000418378 OGTO15294 1046 aa6.02□□□□□ -1.45
SPARCL1-202ENST00000418378 ZEB2O60315 1214 aa6.02□□□□□ -1.45
SPARCL1-202ENST00000418378 RECQL4O94761 1208 aa6.02□□□□□ -1.45
SPARCL1-202ENST00000418378 GNA15P30679 374 aa6.02□□□□□ -1.45
SPARCL1-202ENST00000418378 CD52P31358 61 aa6.02□□□□□ -1.45
SPARCL1-202ENST00000418378 NOS2P35228 1153 aa6.02□□□□□ -1.45
SPARCL1-202ENST00000418378 YARSP54577 528 aaKnown RBP6.02□□□□□ -1.45
SPARCL1-202ENST00000418378 CCL23P55773 120 aa6.02□□□□□ -1.45
SPARCL1-202ENST00000418378 MEA1Q16626 185 aa6.02□□□□□ -1.45
SPARCL1-202ENST00000418378 MORN1Q5T089 497 aa6.02□□□□□ -1.45
SPARCL1-202ENST00000418378 TRIM68Q6AZZ1 485 aa6.02□□□□□ -1.45
SPARCL1-202ENST00000418378 IQSEC1Q6DN90 963 aa6.02□□□□□ -1.45
SPARCL1-202ENST00000418378 CAPRIN2Q6IMN6 1127 aaKnown RBP6.02□□□□□ -1.45
SPARCL1-202ENST00000418378 MPZL3Q6UWV2 235 aa6.02□□□□□ -1.45
SPARCL1-202ENST00000418378 DSTYKQ6XUX3 929 aa6.02□□□□□ -1.45
SPARCL1-202ENST00000418378 MMS22LQ6ZRQ5 1243 aa6.02□□□□□ -1.45
SPARCL1-202ENST00000418378 PLPPR4Q7Z2D5 763 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms