RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 HINFPQ9BQA5 517 aa19.69■□□□□ 0.74
VPS16-204ENST00000417508 SMG9Q9H0W8 520 aaKnown RBP19.69■□□□□ 0.74
VPS16-204ENST00000417508 EPC1Q9H2F5 836 aa19.69■□□□□ 0.74
VPS16-204ENST00000417508 CRTAC1Q9NQ79 661 aa19.69■□□□□ 0.74
VPS16-204ENST00000417508 EXOC1Q9NV70 894 aa19.69■□□□□ 0.74
VPS16-204ENST00000417508 DMDP11532 3685 aa19.69■□□□□ 0.74
VPS16-204ENST00000417508 GREB1Q4ZG55 1949 aa19.68■□□□□ 0.74
VPS16-204ENST00000417508 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.68■□□□□ 0.74
VPS16-204ENST00000417508 TRAV19A0A0A6YYK7 116 aa19.68■□□□□ 0.74
VPS16-204ENST00000417508 TRIM66O15016 1216 aa19.68■□□□□ 0.74
VPS16-204ENST00000417508 USP17L7P0C7H9 530 aa19.68■□□□□ 0.74
VPS16-204ENST00000417508 PPP3CCP48454 512 aa19.68■□□□□ 0.74
VPS16-204ENST00000417508 FAM160A1Q05DH4 1040 aa19.68■□□□□ 0.74
VPS16-204ENST00000417508 TNK2Q07912 1038 aa19.68■□□□□ 0.74
VPS16-204ENST00000417508 RUNX3Q13761 415 aa19.68■□□□□ 0.74
VPS16-204ENST00000417508 PDGFRLQ15198 375 aa19.68■□□□□ 0.74
VPS16-204ENST00000417508 TXNDC11Q6PKC3 985 aa19.68■□□□□ 0.74
VPS16-204ENST00000417508 TSSK4Q6SA08 328 aa19.68■□□□□ 0.74
VPS16-204ENST00000417508 ZNF516Q92618 1163 aa19.68■□□□□ 0.74
VPS16-204ENST00000417508 EXOC4Q96A65 974 aa19.68■□□□□ 0.74
VPS16-204ENST00000417508 VRTNQ9H8Y1 702 aa19.68■□□□□ 0.74
VPS16-204ENST00000417508 DMAC2Q9NW81 257 aa19.68■□□□□ 0.74
VPS16-204ENST00000417508 CCL26Q9Y258 94 aa19.68■□□□□ 0.74
VPS16-204ENST00000417508 ATP6V1DQ9Y5K8 247 aa19.68■□□□□ 0.74
VPS16-204ENST00000417508 KIF26AQ9ULI4 1882 aaPredicted RBP19.67■□□□□ 0.74
VPS16-204ENST00000417508 ANAPC1Q9H1A4 1944 aa19.67■□□□□ 0.74
VPS16-204ENST00000417508 PDXKO00764 312 aa19.67■□□□□ 0.74
VPS16-204ENST00000417508 HCRTO43612 131 aa19.67■□□□□ 0.74
VPS16-204ENST00000417508 PHACTR2O75167 634 aa19.67■□□□□ 0.74
VPS16-204ENST00000417508 PFKFB1P16118 471 aa19.67■□□□□ 0.74
VPS16-204ENST00000417508 BDNFP23560 247 aa19.67■□□□□ 0.74
VPS16-204ENST00000417508 ANXA13P27216 316 aa19.67■□□□□ 0.74
VPS16-204ENST00000417508 GRIK1P39086 918 aa19.67■□□□□ 0.74
VPS16-204ENST00000417508 ID4P47928 161 aa19.67■□□□□ 0.74
VPS16-204ENST00000417508 CLDN10P78369 228 aa19.67■□□□□ 0.74
VPS16-204ENST00000417508 STK4Q13043 487 aa19.67■□□□□ 0.74
VPS16-204ENST00000417508 CCINQ13939 588 aa19.67■□□□□ 0.74
VPS16-204ENST00000417508 GAS6Q14393 721 aa19.67■□□□□ 0.74
VPS16-204ENST00000417508 PON2Q15165 354 aa19.67■□□□□ 0.74
VPS16-204ENST00000417508 KMT5BQ4FZB7 885 aa19.67■□□□□ 0.74
VPS16-204ENST00000417508 GRAMD1CQ8IYS0 662 aa19.67■□□□□ 0.74
VPS16-204ENST00000417508 OR6B3Q8NGW1 331 aa19.67■□□□□ 0.74
VPS16-204ENST00000417508 TTC8Q8TAM2 541 aa19.67■□□□□ 0.74
VPS16-204ENST00000417508 PARD3BQ8TEW8 1205 aa19.67■□□□□ 0.74
VPS16-204ENST00000417508 MYLPFQ96A32 169 aa19.67■□□□□ 0.74
VPS16-204ENST00000417508 C8orf48Q96LL4 319 aa19.67■□□□□ 0.74
VPS16-204ENST00000417508 HPSEQ9Y251 543 aa19.67■□□□□ 0.74
VPS16-204ENST00000417508 A0A1B0GVL5 298 aa19.66■□□□□ 0.74
VPS16-204ENST00000417508 TRDMT1O14717 391 aaKnown RBP19.66■□□□□ 0.74
VPS16-204ENST00000417508 KIF20AO95235 890 aa19.66■□□□□ 0.74
VPS16-204ENST00000417508 TCF3P15923 654 aa19.66■□□□□ 0.74
VPS16-204ENST00000417508 PTPN1P18031 435 aaKnown RBP19.66■□□□□ 0.74
VPS16-204ENST00000417508 HOXA6P31267 233 aa19.66■□□□□ 0.74
VPS16-204ENST00000417508 CNR2P34972 360 aa19.66■□□□□ 0.74
VPS16-204ENST00000417508 MYL6P60660 151 aa19.66■□□□□ 0.74
VPS16-204ENST00000417508 PSMC1P62191 440 aaKnown RBP19.66■□□□□ 0.74
VPS16-204ENST00000417508 CYP27A1Q02318 531 aa19.66■□□□□ 0.74
VPS16-204ENST00000417508 DENND5BQ6ZUT9 1274 aa19.66■□□□□ 0.74
VPS16-204ENST00000417508 CCDC47Q96A33 483 aaKnown RBP19.66■□□□□ 0.74
VPS16-204ENST00000417508 PCED1BQ96HM7 432 aa19.66■□□□□ 0.74
VPS16-204ENST00000417508 MRPL45Q9BRJ2 306 aaKnown RBP19.66■□□□□ 0.74
VPS16-204ENST00000417508 SCAND2PQ9GZW5 306 aaPredicted RBP19.66■□□□□ 0.74
VPS16-204ENST00000417508 GZF1Q9H116 711 aaPredicted RBP19.66■□□□□ 0.74
VPS16-204ENST00000417508 XYLT2Q9H1B5 865 aa19.66■□□□□ 0.74
VPS16-204ENST00000417508 HPS4Q9NQG7 708 aa19.66■□□□□ 0.74
VPS16-204ENST00000417508 NCDNQ9UBB6 729 aa19.66■□□□□ 0.74
VPS16-204ENST00000417508 PTPRDP23468 1912 aa19.66■□□□□ 0.74
VPS16-204ENST00000417508 FAM237AA0A1B0GTK4 181 aa19.65■□□□□ 0.74
VPS16-204ENST00000417508 TADA3O75528 432 aa19.65■□□□□ 0.74
VPS16-204ENST00000417508 HDCP19113 662 aa19.65■□□□□ 0.74
VPS16-204ENST00000417508 SYKP43405 635 aa19.65■□□□□ 0.74
VPS16-204ENST00000417508 NOP14P78316 857 aaKnown RBP19.65■□□□□ 0.74
VPS16-204ENST00000417508 SATB1Q01826 763 aa19.65■□□□□ 0.74
VPS16-204ENST00000417508 GRSF1Q12849 480 aaKnown RBP eCLIP19.65■□□□□ 0.74
VPS16-204ENST00000417508 CCDC142Q17RM4 750 aa19.65■□□□□ 0.74
VPS16-204ENST00000417508 ERMP1Q7Z2K6 904 aa19.65■□□□□ 0.74
VPS16-204ENST00000417508 KIAA2013Q8IYS2 634 aa19.65■□□□□ 0.74
VPS16-204ENST00000417508 KIAA1958Q8N8K9 716 aa19.65■□□□□ 0.74
VPS16-204ENST00000417508 KIAA0895Q8NCT3 520 aa19.65■□□□□ 0.74
VPS16-204ENST00000417508 STKLD1Q8NE28 680 aa19.65■□□□□ 0.74
VPS16-204ENST00000417508 CYP2S1Q96SQ9 504 aa19.65■□□□□ 0.74
VPS16-204ENST00000417508 TTLL2Q9BWV7 592 aa19.65■□□□□ 0.74
VPS16-204ENST00000417508 KCTD10Q9H3F6 313 aa19.65■□□□□ 0.74
VPS16-204ENST00000417508 EBF3Q9H4W6 596 aa19.65■□□□□ 0.74
VPS16-204ENST00000417508 RBM12Q9NTZ6 932 aaKnown RBP19.65■□□□□ 0.74
VPS16-204ENST00000417508 TRPM5Q9NZQ8 1165 aa19.65■□□□□ 0.74
VPS16-204ENST00000417508 GCNT4Q9P109 453 aa19.65■□□□□ 0.74
VPS16-204ENST00000417508 RAB23Q9ULC3 237 aa19.65■□□□□ 0.74
VPS16-204ENST00000417508 SMG5Q9UPR3 1016 aaKnown RBP19.65■□□□□ 0.74
VPS16-204ENST00000417508 A8MXQ7 604 aa19.64■□□□□ 0.73
VPS16-204ENST00000417508 IKBKBO14920 756 aa19.64■□□□□ 0.73
VPS16-204ENST00000417508 ATG13O75143 517 aa19.64■□□□□ 0.73
VPS16-204ENST00000417508 RPN1P04843 607 aaKnown RBP19.64■□□□□ 0.73
VPS16-204ENST00000417508 CKMP06732 381 aa19.64■□□□□ 0.73
VPS16-204ENST00000417508 BIRC3Q13489 604 aa19.64■□□□□ 0.73
VPS16-204ENST00000417508 KCNB1Q14721 858 aa19.64■□□□□ 0.73
VPS16-204ENST00000417508 MTF1Q14872 753 aa19.64■□□□□ 0.73
VPS16-204ENST00000417508 TMEM196Q5HYL7 178 aa19.64■□□□□ 0.73
VPS16-204ENST00000417508 MDH1BQ5I0G3 518 aa19.64■□□□□ 0.73
VPS16-204ENST00000417508 TMC2Q8TDI7 906 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms