RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.92■□□□□ 0.46
CALD1-204ENST00000417172 PTPRDP23468 1912 aa17.92■□□□□ 0.46
CALD1-204ENST00000417172 GRAP2O75791 330 aa17.91■□□□□ 0.46
CALD1-204ENST00000417172 EN2P19622 333 aaPredicted RBP17.91■□□□□ 0.46
CALD1-204ENST00000417172 LHX1P48742 406 aa17.91■□□□□ 0.46
CALD1-204ENST00000417172 PEX5P50542 639 aa17.91■□□□□ 0.46
CALD1-204ENST00000417172 BCAT1P54687 386 aa17.91■□□□□ 0.46
CALD1-204ENST00000417172 TAS2R40P59535 323 aa17.91■□□□□ 0.46
CALD1-204ENST00000417172 CKAP4Q07065 602 aaKnown RBP17.91■□□□□ 0.46
CALD1-204ENST00000417172 BST2Q10589 180 aaKnown RBP17.91■□□□□ 0.46
CALD1-204ENST00000417172 TAF5Q15542 800 aa17.91■□□□□ 0.46
CALD1-204ENST00000417172 FAM102AQ5T9C2 384 aaPredicted RBP17.91■□□□□ 0.46
CALD1-204ENST00000417172 NPAS4Q8IUM7 802 aa17.91■□□□□ 0.46
CALD1-204ENST00000417172 SCUBE3Q8IX30 993 aa17.91■□□□□ 0.46
CALD1-204ENST00000417172 GOLGA1Q92805 767 aa17.91■□□□□ 0.46
CALD1-204ENST00000417172 PCED1BQ96HM7 432 aa17.91■□□□□ 0.46
CALD1-204ENST00000417172 KANSL3Q9P2N6 904 aa17.91■□□□□ 0.46
CALD1-204ENST00000417172 PTPRSQ13332 1948 aa17.91■□□□□ 0.46
CALD1-204ENST00000417172 NT5C1B-RDH14C9J2C7 533 aa17.9■□□□□ 0.46
CALD1-204ENST00000417172 F8VP50 259 aa17.9■□□□□ 0.46
CALD1-204ENST00000417172 CYP11A1P05108 521 aa17.9■□□□□ 0.46
CALD1-204ENST00000417172 KRT3P12035 628 aa17.9■□□□□ 0.46
CALD1-204ENST00000417172 CTNNA1P35221 906 aaKnown RBP17.9■□□□□ 0.46
CALD1-204ENST00000417172 CACNA2D1P54289 1103 aa17.9■□□□□ 0.46
CALD1-204ENST00000417172 MRPS25P82663 173 aaKnown RBP17.9■□□□□ 0.46
CALD1-204ENST00000417172 LLGL1Q15334 1064 aa17.9■□□□□ 0.46
CALD1-204ENST00000417172 OR6B2Q6IFH4 312 aa17.9■□□□□ 0.46
CALD1-204ENST00000417172 TRNP1Q6NT89 227 aa17.9■□□□□ 0.46
CALD1-204ENST00000417172 IPO4Q8TEX9 1081 aaKnown RBP17.9■□□□□ 0.46
CALD1-204ENST00000417172 UBXN4Q92575 508 aa17.9■□□□□ 0.46
CALD1-204ENST00000417172 MCRS1Q96EZ8 462 aa17.9■□□□□ 0.46
CALD1-204ENST00000417172 B3GALT6Q96L58 329 aa17.9■□□□□ 0.46
CALD1-204ENST00000417172 HNRNPABQ99729 332 aaKnown RBP17.9■□□□□ 0.46
CALD1-204ENST00000417172 MED10Q9BTT4 135 aa17.9■□□□□ 0.46
CALD1-204ENST00000417172 SLC4A5Q9BY07 1137 aa17.9■□□□□ 0.46
CALD1-204ENST00000417172 MCOLN1Q9GZU1 580 aa17.9■□□□□ 0.46
CALD1-204ENST00000417172 MIS12Q9H081 205 aa17.9■□□□□ 0.46
CALD1-204ENST00000417172 TMLHEQ9NVH6 421 aa17.9■□□□□ 0.46
CALD1-204ENST00000417172 SIGLEC16A6NMB1 481 aa17.9■□□□□ 0.46
CALD1-204ENST00000417172 NRP1O14786 923 aa17.9■□□□□ 0.46
CALD1-204ENST00000417172 PARNO95453 639 aaKnown RBP17.9■□□□□ 0.46
CALD1-204ENST00000417172 GJC1P36383 396 aa17.9■□□□□ 0.46
CALD1-204ENST00000417172 SLC11A1P49279 550 aa17.9■□□□□ 0.46
CALD1-204ENST00000417172 ZNF268Q14587 947 aaPredicted RBP17.9■□□□□ 0.46
CALD1-204ENST00000417172 KCTD19Q17RG1 926 aaPredicted RBP17.9■□□□□ 0.46
CALD1-204ENST00000417172 CFAP221Q4G0U5 840 aa17.9■□□□□ 0.46
CALD1-204ENST00000417172 OVOS1Q6IE37 1185 aa17.9■□□□□ 0.46
CALD1-204ENST00000417172 CNKSR3Q6P9H4 555 aa17.9■□□□□ 0.46
CALD1-204ENST00000417172 TMEM173Q86WV6 379 aaPredicted RBP17.9■□□□□ 0.46
CALD1-204ENST00000417172 MSANTD4Q8NCY6 345 aa17.9■□□□□ 0.46
CALD1-204ENST00000417172 SPATA4Q8NEY3 305 aa17.9■□□□□ 0.46
CALD1-204ENST00000417172 PBKQ96KB5 322 aa17.9■□□□□ 0.46
CALD1-204ENST00000417172 KRT82Q9NSB4 513 aa17.9■□□□□ 0.46
CALD1-204ENST00000417172 RBM12Q9NTZ6 932 aaKnown RBP17.9■□□□□ 0.46
CALD1-204ENST00000417172 MIF4GDA9UHW6 222 aaKnown RBP17.89■□□□□ 0.45
CALD1-204ENST00000417172 PAPSS1O43252 624 aaPredicted RBP17.89■□□□□ 0.45
CALD1-204ENST00000417172 TIMP1P01033 207 aa17.89■□□□□ 0.45
CALD1-204ENST00000417172 FAM163BP0C2L3 166 aa17.89■□□□□ 0.45
CALD1-204ENST00000417172 RHOXF2BP0C7M4 288 aa17.89■□□□□ 0.45
CALD1-204ENST00000417172 ACRP10323 421 aa17.89■□□□□ 0.45
CALD1-204ENST00000417172 LCP1P13796 627 aa17.89■□□□□ 0.45
CALD1-204ENST00000417172 SSR1P43307 286 aaKnown RBP17.89■□□□□ 0.45
CALD1-204ENST00000417172 GSCP56915 257 aaPredicted RBP17.89■□□□□ 0.45
CALD1-204ENST00000417172 IKBKEQ14164 716 aa17.89■□□□□ 0.45
CALD1-204ENST00000417172 FAM117BQ6P1L5 589 aa17.89■□□□□ 0.45
CALD1-204ENST00000417172 ADAT2Q7Z6V5 191 aaKnown RBP17.89■□□□□ 0.45
CALD1-204ENST00000417172 LRRTM3Q86VH5 581 aa17.89■□□□□ 0.45
CALD1-204ENST00000417172 RNPC3Q96LT9 517 aaKnown RBP17.89■□□□□ 0.45
CALD1-204ENST00000417172 RHOXF2Q9BQY4 288 aa17.89■□□□□ 0.45
CALD1-204ENST00000417172 MARCH5Q9NX47 278 aa17.89■□□□□ 0.45
CALD1-204ENST00000417172 CDH9Q9ULB4 789 aa17.89■□□□□ 0.45
CALD1-204ENST00000417172 PCDHA3Q9Y5H8 950 aa17.89■□□□□ 0.45
CALD1-204ENST00000417172 DYNC1I1O14576 645 aa17.88■□□□□ 0.45
CALD1-204ENST00000417172 OR4Q2P0C623 313 aa17.88■□□□□ 0.45
CALD1-204ENST00000417172 SETSIPP0DME0 302 aa17.88■□□□□ 0.45
CALD1-204ENST00000417172 PYGMP11217 842 aa17.88■□□□□ 0.45
CALD1-204ENST00000417172 PAFAH1B1P43034 410 aa17.88■□□□□ 0.45
CALD1-204ENST00000417172 MAP3K7CLP57077 242 aa17.88■□□□□ 0.45
CALD1-204ENST00000417172 DEFB103AP81534 67 aa17.88■□□□□ 0.45
CALD1-204ENST00000417172 RAB6CQ53S08 254 aa17.88■□□□□ 0.45
CALD1-204ENST00000417172 OLFML1Q6UWY5 402 aa17.88■□□□□ 0.45
CALD1-204ENST00000417172 CLEC20AQ6ZU45 233 aa17.88■□□□□ 0.45
CALD1-204ENST00000417172 ZNF572Q7Z3I7 529 aaPredicted RBP17.88■□□□□ 0.45
CALD1-204ENST00000417172 TMEM110Q86TL2 294 aa17.88■□□□□ 0.45
CALD1-204ENST00000417172 FAM35AQ86V20 835 aa17.88■□□□□ 0.45
CALD1-204ENST00000417172 METTL23Q86XA0 190 aa17.88■□□□□ 0.45
CALD1-204ENST00000417172 UBL4BQ8N7F7 174 aa17.88■□□□□ 0.45
CALD1-204ENST00000417172 NDRG1Q92597 394 aaKnown RBP17.88■□□□□ 0.45
CALD1-204ENST00000417172 MYLPFQ96A32 169 aa17.88■□□□□ 0.45
CALD1-204ENST00000417172 AP1M1Q9BXS5 423 aa17.88■□□□□ 0.45
CALD1-204ENST00000417172 DUSP16Q9BY84 665 aa17.88■□□□□ 0.45
CALD1-204ENST00000417172 RAB6CQ9H0N0 254 aa17.88■□□□□ 0.45
CALD1-204ENST00000417172 KLHL11Q9NVR0 708 aa17.88■□□□□ 0.45
CALD1-204ENST00000417172 IP6K2Q9UHH9 426 aa17.88■□□□□ 0.45
CALD1-204ENST00000417172 PCDHB8Q9UN66 801 aa17.88■□□□□ 0.45
CALD1-204ENST00000417172 TMEM189-UBE2V1I3L0A0 370 aa17.88■□□□□ 0.45
CALD1-204ENST00000417172 CES2O00748 559 aa17.88■□□□□ 0.45
CALD1-204ENST00000417172 TADA2AO75478 443 aa17.88■□□□□ 0.45
CALD1-204ENST00000417172 RAG1P15918 1043 aa17.88■□□□□ 0.45
CALD1-204ENST00000417172 NPR3P17342 541 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms