RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 EXOC3O60645 756 aa16.15■□□□□ 0.18
UBXN4-203ENST00000416538 VNN1O95497 513 aa16.15■□□□□ 0.18
UBXN4-203ENST00000416538 BDNFP23560 247 aa16.15■□□□□ 0.18
UBXN4-203ENST00000416538 MAGEA11P43364 429 aa16.15■□□□□ 0.18
UBXN4-203ENST00000416538 DLG4P78352 724 aa16.15■□□□□ 0.18
UBXN4-203ENST00000416538 TAF12Q16514 161 aa16.15■□□□□ 0.18
UBXN4-203ENST00000416538 ZNF528Q3MIS6 628 aa16.15■□□□□ 0.18
UBXN4-203ENST00000416538 MDH1BQ5I0G3 518 aa16.15■□□□□ 0.18
UBXN4-203ENST00000416538 C1orf220Q5T0J3 134 aa16.15■□□□□ 0.18
UBXN4-203ENST00000416538 NAIF1Q69YI7 327 aaPredicted RBP16.15■□□□□ 0.18
UBXN4-203ENST00000416538 MON1AQ86VX9 555 aa16.15■□□□□ 0.18
UBXN4-203ENST00000416538 SCN4BQ8IWT1 228 aa16.15■□□□□ 0.18
UBXN4-203ENST00000416538 CSGALNACT1Q8TDX6 532 aa16.15■□□□□ 0.18
UBXN4-203ENST00000416538 MMS19Q96T76 1030 aa16.15■□□□□ 0.18
UBXN4-203ENST00000416538 FAM83CQ9BQN1 747 aa16.15■□□□□ 0.18
UBXN4-203ENST00000416538 SDCBP2Q9H190 292 aa16.15■□□□□ 0.18
UBXN4-203ENST00000416538 LMAN1LQ9HAT1 526 aa16.15■□□□□ 0.18
UBXN4-203ENST00000416538 DMXL1Q9Y485 3027 aa16.14■□□□□ 0.17
UBXN4-203ENST00000416538 C2orf78A6NCI8 922 aa16.14■□□□□ 0.17
UBXN4-203ENST00000416538 DPYSL4O14531 572 aa16.14■□□□□ 0.17
UBXN4-203ENST00000416538 TACC1O75410 805 aa16.14■□□□□ 0.17
UBXN4-203ENST00000416538 STAU1O95793 577 aaKnown RBP16.14■□□□□ 0.17
UBXN4-203ENST00000416538 LMNAP02545 664 aaKnown RBP16.14■□□□□ 0.17
UBXN4-203ENST00000416538 ARSAP15289 507 aa16.14■□□□□ 0.17
UBXN4-203ENST00000416538 SYKP43405 635 aa16.14■□□□□ 0.17
UBXN4-203ENST00000416538 RAP1GAPP47736 663 aa16.14■□□□□ 0.17
UBXN4-203ENST00000416538 MLLT6P55198 1093 aaPredicted RBP16.14■□□□□ 0.17
UBXN4-203ENST00000416538 RPL10AP62906 217 aaKnown RBP16.14■□□□□ 0.17
UBXN4-203ENST00000416538 CLDN10P78369 228 aa16.14■□□□□ 0.17
UBXN4-203ENST00000416538 SATB1Q01826 763 aa16.14■□□□□ 0.17
UBXN4-203ENST00000416538 USP4Q13107 963 aa16.14■□□□□ 0.17
UBXN4-203ENST00000416538 WDR72Q3MJ13 1102 aa16.14■□□□□ 0.17
UBXN4-203ENST00000416538 CELF5Q8N6W0 485 aaKnown RBP16.14■□□□□ 0.17
UBXN4-203ENST00000416538 ZBTB44Q8NCP5 570 aa16.14■□□□□ 0.17
UBXN4-203ENST00000416538 PARD3BQ8TEW8 1205 aa16.14■□□□□ 0.17
UBXN4-203ENST00000416538 ZNF518BQ9C0D4 1074 aa16.14■□□□□ 0.17
UBXN4-203ENST00000416538 GCNT4Q9P109 453 aa16.14■□□□□ 0.17
UBXN4-203ENST00000416538 CGNQ9P2M7 1197 aaKnown RBP16.14■□□□□ 0.17
UBXN4-203ENST00000416538 RALGAPA1Q6GYQ0 2036 aa16.14■□□□□ 0.17
UBXN4-203ENST00000416538 CLDN5O00501 218 aa16.13■□□□□ 0.17
UBXN4-203ENST00000416538 NCAM2O15394 837 aa16.13■□□□□ 0.17
UBXN4-203ENST00000416538 LILRB5O75023 590 aa16.13■□□□□ 0.17
UBXN4-203ENST00000416538 C4BPAP04003 597 aaKnown RBP16.13■□□□□ 0.17
UBXN4-203ENST00000416538 NR3C1P04150 777 aa16.13■□□□□ 0.17
UBXN4-203ENST00000416538 RPN1P04843 607 aaKnown RBP16.13■□□□□ 0.17
UBXN4-203ENST00000416538 KPNA1P52294 538 aaPredicted RBP16.13■□□□□ 0.17
UBXN4-203ENST00000416538 DMWDQ09019 674 aa16.13■□□□□ 0.17
UBXN4-203ENST00000416538 DPYDQ12882 1025 aa16.13■□□□□ 0.17
UBXN4-203ENST00000416538 PON2Q15165 354 aa16.13■□□□□ 0.17
UBXN4-203ENST00000416538 ZNF77Q15935 545 aa16.13■□□□□ 0.17
UBXN4-203ENST00000416538 PKN3Q6P5Z2 889 aa16.13■□□□□ 0.17
UBXN4-203ENST00000416538 SCARA5Q6ZMJ2 495 aa16.13■□□□□ 0.17
UBXN4-203ENST00000416538 C4orf50Q6ZRC1 276 aa16.13■□□□□ 0.17
UBXN4-203ENST00000416538 SLC9A9Q8IVB4 645 aa16.13■□□□□ 0.17
UBXN4-203ENST00000416538 DCLK2Q8N568 766 aa16.13■□□□□ 0.17
UBXN4-203ENST00000416538 FSIP1Q8NA03 581 aa16.13■□□□□ 0.17
UBXN4-203ENST00000416538 MYCBPAPQ8TBZ2 947 aa16.13■□□□□ 0.17
UBXN4-203ENST00000416538 MRPS31Q92665 395 aaKnown RBP16.13■□□□□ 0.17
UBXN4-203ENST00000416538 CYP2S1Q96SQ9 504 aa16.13■□□□□ 0.17
UBXN4-203ENST00000416538 EBF3Q9H4W6 596 aa16.13■□□□□ 0.17
UBXN4-203ENST00000416538 C8orf33Q9H7E9 229 aaPredicted RBP16.13■□□□□ 0.17
UBXN4-203ENST00000416538 GKN1Q9NS71 199 aa16.13■□□□□ 0.17
UBXN4-203ENST00000416538 TDP1Q9NUW8 608 aa16.13■□□□□ 0.17
UBXN4-203ENST00000416538 NXF1Q9UBU9 619 aaKnown RBP16.13■□□□□ 0.17
UBXN4-203ENST00000416538 FRYLO94915 3013 aa16.13■□□□□ 0.17
UBXN4-203ENST00000416538 F8VP50 259 aa16.12■□□□□ 0.17
UBXN4-203ENST00000416538 DDX6P26196 483 aaKnown RBP eCLIP16.12■□□□□ 0.17
UBXN4-203ENST00000416538 AVPR1AP37288 418 aa16.12■□□□□ 0.17
UBXN4-203ENST00000416538 CDH8P55286 799 aa16.12■□□□□ 0.17
UBXN4-203ENST00000416538 TNNC1P63316 161 aa16.12■□□□□ 0.17
UBXN4-203ENST00000416538 ZXDBP98169 803 aa16.12■□□□□ 0.17
UBXN4-203ENST00000416538 CYP27A1Q02318 531 aa16.12■□□□□ 0.17
UBXN4-203ENST00000416538 CCINQ13939 588 aa16.12■□□□□ 0.17
UBXN4-203ENST00000416538 ZC3H14Q6PJT7 736 aaKnown RBP16.12■□□□□ 0.17
UBXN4-203ENST00000416538 RALGPS2Q86X27 583 aaPredicted RBP16.12■□□□□ 0.17
UBXN4-203ENST00000416538 OR6B3Q8NGW1 331 aa16.12■□□□□ 0.17
UBXN4-203ENST00000416538 TMEM174Q8WUU8 243 aa16.12■□□□□ 0.17
UBXN4-203ENST00000416538 MSANTD3Q96H12 275 aa16.12■□□□□ 0.17
UBXN4-203ENST00000416538 SEMA4AQ9H3S1 761 aa16.12■□□□□ 0.17
UBXN4-203ENST00000416538 VRTNQ9H8Y1 702 aa16.12■□□□□ 0.17
UBXN4-203ENST00000416538 TRPC7Q9HCX4 862 aa16.12■□□□□ 0.17
UBXN4-203ENST00000416538 MAGEC2Q9UBF1 373 aaPredicted RBP16.12■□□□□ 0.17
UBXN4-203ENST00000416538 UXTQ9UBK9 157 aaPredicted RBP16.12■□□□□ 0.17
UBXN4-203ENST00000416538 HMGXB4Q9UGU5 601 aa16.12■□□□□ 0.17
UBXN4-203ENST00000416538 USP25Q9UHP3 1055 aa16.12■□□□□ 0.17
UBXN4-203ENST00000416538 R3HCC1Q9Y3T6 440 aaKnown RBP16.12■□□□□ 0.17
UBXN4-203ENST00000416538 A0A1W2PQ27 194 aa16.11■□□□□ 0.17
UBXN4-203ENST00000416538 A0A1W2PQ64 194 aa16.11■□□□□ 0.17
UBXN4-203ENST00000416538 A0A1W2PQD8 194 aa16.11■□□□□ 0.17
UBXN4-203ENST00000416538 PDXKO00764 312 aa16.11■□□□□ 0.17
UBXN4-203ENST00000416538 RHOBTB3O94955 611 aa16.11■□□□□ 0.17
UBXN4-203ENST00000416538 GNL1P36915 607 aaPredicted RBP16.11■□□□□ 0.17
UBXN4-203ENST00000416538 PLCB2Q00722 1185 aa16.11■□□□□ 0.17
UBXN4-203ENST00000416538 PSMD2Q13200 908 aa16.11■□□□□ 0.17
UBXN4-203ENST00000416538 BIRC3Q13489 604 aa16.11■□□□□ 0.17
UBXN4-203ENST00000416538 NCOA4Q13772 614 aa16.11■□□□□ 0.17
UBXN4-203ENST00000416538 ZNF268Q14587 947 aaPredicted RBP16.11■□□□□ 0.17
UBXN4-203ENST00000416538 MTF1Q14872 753 aa16.11■□□□□ 0.17
UBXN4-203ENST00000416538 ZNF699Q32M78 642 aa16.11■□□□□ 0.17
UBXN4-203ENST00000416538 ITPRIPL2Q3MIP1 535 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms