RNA–Protein interactions for RNA: ENST00000416380.6

YIPF3-203, Transcript of Yip1 domain family member 3, humanhuman

TSL 5

Gene YIPF3, Length 1,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-203ENST00000416380 ZP2Q05996 745 aa13.51□□□□□ -0.25
YIPF3-203ENST00000416380 ZNF394Q53GI3 561 aa13.51□□□□□ -0.25
YIPF3-203ENST00000416380 PPP1R26Q5T8A7 1209 aaPredicted RBP13.51□□□□□ -0.25
YIPF3-203ENST00000416380 VSTM1Q6UX27 236 aa13.51□□□□□ -0.25
YIPF3-203ENST00000416380 EP400NLQ6ZTU2 488 aa13.51□□□□□ -0.25
YIPF3-203ENST00000416380 GAREM2Q75VX8 874 aa13.51□□□□□ -0.25
YIPF3-203ENST00000416380 DNAJB7Q7Z6W7 309 aaPredicted RBP13.51□□□□□ -0.25
YIPF3-203ENST00000416380 TTC30AQ86WT1 665 aa13.51□□□□□ -0.25
YIPF3-203ENST00000416380 CREBRFQ8IUR6 639 aa13.51□□□□□ -0.25
YIPF3-203ENST00000416380 TTC39CQ8N584 583 aa13.51□□□□□ -0.25
YIPF3-203ENST00000416380 OLIG1Q8TAK6 271 aa13.51□□□□□ -0.25
YIPF3-203ENST00000416380 GPR152Q8TDT2 470 aa13.51□□□□□ -0.25
YIPF3-203ENST00000416380 TNIP3Q96KP6 325 aa13.51□□□□□ -0.25
YIPF3-203ENST00000416380 KCNK16Q96T55 309 aa13.51□□□□□ -0.25
YIPF3-203ENST00000416380 TTYH3Q9C0H2 523 aa13.51□□□□□ -0.25
YIPF3-203ENST00000416380 FHOD1Q9Y613 1164 aa13.51□□□□□ -0.25
YIPF3-203ENST00000416380 CLUHO75153 1309 aa13.5□□□□□ -0.25
YIPF3-203ENST00000416380 FOXN3O00409 490 aaPredicted RBP13.5□□□□□ -0.25
YIPF3-203ENST00000416380 PRRG1O14668 218 aa13.5□□□□□ -0.25
YIPF3-203ENST00000416380 F11P03951 625 aa13.5□□□□□ -0.25
YIPF3-203ENST00000416380 RHOP08100 348 aa13.5□□□□□ -0.25
YIPF3-203ENST00000416380 CFHP08603 1231 aa13.5□□□□□ -0.25
YIPF3-203ENST00000416380 UCHL3P15374 230 aa13.5□□□□□ -0.25
YIPF3-203ENST00000416380 CLCN1P35523 988 aa13.5□□□□□ -0.25
YIPF3-203ENST00000416380 MTHFRP42898 656 aa13.5□□□□□ -0.25
YIPF3-203ENST00000416380 PGFP49763 221 aa13.5□□□□□ -0.25
YIPF3-203ENST00000416380 CETN1Q12798 172 aa13.5□□□□□ -0.25
YIPF3-203ENST00000416380 SYCP1Q15431 976 aa13.5□□□□□ -0.25
YIPF3-203ENST00000416380 MAPRE1Q15691 268 aaKnown RBP13.5□□□□□ -0.25
YIPF3-203ENST00000416380 ATAT1Q5SQI0 421 aa13.5□□□□□ -0.25
YIPF3-203ENST00000416380 C4orf50Q6ZRC1 276 aa13.5□□□□□ -0.25
YIPF3-203ENST00000416380 CLEC20AQ6ZU45 233 aa13.5□□□□□ -0.25
YIPF3-203ENST00000416380 SPATA2LQ8IUW3 424 aaPredicted RBP13.5□□□□□ -0.25
YIPF3-203ENST00000416380 FAM71AQ8IYT1 594 aa13.5□□□□□ -0.25
YIPF3-203ENST00000416380 CCDC150Q8NCX0 1101 aa13.5□□□□□ -0.25
YIPF3-203ENST00000416380 SHKBP1Q8TBC3 707 aa13.5□□□□□ -0.25
YIPF3-203ENST00000416380 TRMT2BQ96GJ1 504 aaKnown RBP13.5□□□□□ -0.25
YIPF3-203ENST00000416380 NECTIN4Q96NY8 510 aa13.5□□□□□ -0.25
YIPF3-203ENST00000416380 MYADMQ96S97 322 aa13.5□□□□□ -0.25
YIPF3-203ENST00000416380 SEPT5Q99719 369 aaPredicted RBP13.5□□□□□ -0.25
YIPF3-203ENST00000416380 TTLL2Q9BWV7 592 aa13.5□□□□□ -0.25
YIPF3-203ENST00000416380 PHF7Q9BWX1 381 aaPredicted RBP13.5□□□□□ -0.25
YIPF3-203ENST00000416380 TSPY26PQ9H489 355 aa13.5□□□□□ -0.25
YIPF3-203ENST00000416380 FAM49BQ9NUQ9 324 aa13.5□□□□□ -0.25
YIPF3-203ENST00000416380 DNAJC12Q9UKB3 198 aa13.5□□□□□ -0.25
YIPF3-203ENST00000416380 DOCK6Q96HP0 2047 aa13.49□□□□□ -0.25
YIPF3-203ENST00000416380 F8VP50 259 aa13.49□□□□□ -0.25
YIPF3-203ENST00000416380 TULP2O00295 520 aa13.49□□□□□ -0.25
YIPF3-203ENST00000416380 MICAL2O94851 1124 aa13.49□□□□□ -0.25
YIPF3-203ENST00000416380 PAEPP09466 180 aa13.49□□□□□ -0.25
YIPF3-203ENST00000416380 ELF1P32519 619 aa13.49□□□□□ -0.25
YIPF3-203ENST00000416380 RPL34P49207 117 aaKnown RBP13.49□□□□□ -0.25
YIPF3-203ENST00000416380 FANCCQ00597 558 aa13.49□□□□□ -0.25
YIPF3-203ENST00000416380 CYP27A1Q02318 531 aa13.49□□□□□ -0.25
YIPF3-203ENST00000416380 MGAT5BQ3V5L5 792 aa13.49□□□□□ -0.25
YIPF3-203ENST00000416380 TJAP1Q5JTD0 557 aa13.49□□□□□ -0.25
YIPF3-203ENST00000416380 TMEM270Q6UE05 265 aa13.49□□□□□ -0.25
YIPF3-203ENST00000416380 ENOSF1Q7L5Y1 443 aa13.49□□□□□ -0.25
YIPF3-203ENST00000416380 GPRIN1Q7Z2K8 1008 aa13.49□□□□□ -0.25
YIPF3-203ENST00000416380 RBBP8NLQ8NC74 664 aaPredicted RBP13.49□□□□□ -0.25
YIPF3-203ENST00000416380 GIPC2Q8TF65 315 aa13.49□□□□□ -0.25
YIPF3-203ENST00000416380 DDX1Q92499 740 aaKnown RBP13.49□□□□□ -0.25
YIPF3-203ENST00000416380 CYFIP2Q96F07 1278 aa13.49□□□□□ -0.25
YIPF3-203ENST00000416380 CEP295NLQ96MC4 621 aa13.49□□□□□ -0.25
YIPF3-203ENST00000416380 RIPOR3Q96MK2 946 aa13.49□□□□□ -0.25
YIPF3-203ENST00000416380 NECAB3Q96P71 396 aaPredicted RBP13.49□□□□□ -0.25
YIPF3-203ENST00000416380 LSM14BQ9BX40 385 aaKnown RBP13.49□□□□□ -0.25
YIPF3-203ENST00000416380 PRKAG3Q9UGI9 489 aa13.49□□□□□ -0.25
YIPF3-203ENST00000416380 ASB3Q9Y575 518 aa13.49□□□□□ -0.25
YIPF3-203ENST00000416380 NCANO14594 1321 aa13.48□□□□□ -0.25
YIPF3-203ENST00000416380 SLC38A8A6NNN8 435 aa13.48□□□□□ -0.25
YIPF3-203ENST00000416380 C2CD4DB7Z1M9 353 aa13.48□□□□□ -0.25
YIPF3-203ENST00000416380 XYLBO75191 536 aa13.48□□□□□ -0.25
YIPF3-203ENST00000416380 CEBPBP17676 345 aa13.48□□□□□ -0.25
YIPF3-203ENST00000416380 PTPN2P17706 415 aa13.48□□□□□ -0.25
YIPF3-203ENST00000416380 AAK1Q2M2I8 961 aa13.48□□□□□ -0.25
YIPF3-203ENST00000416380 RAB41Q5JT25 222 aa13.48□□□□□ -0.25
YIPF3-203ENST00000416380 CES5AQ6NT32 575 aa13.48□□□□□ -0.25
YIPF3-203ENST00000416380 LCLAT1Q6UWP7 414 aa13.48□□□□□ -0.25
YIPF3-203ENST00000416380 BHLHA9Q7RTU4 235 aa13.48□□□□□ -0.25
YIPF3-203ENST00000416380 ADHFE1Q8IWW8 467 aa13.48□□□□□ -0.25
YIPF3-203ENST00000416380 NPAS3Q8IXF0 933 aa13.48□□□□□ -0.25
YIPF3-203ENST00000416380 WDTC1Q8N5D0 677 aa13.48□□□□□ -0.25
YIPF3-203ENST00000416380 BAP1Q92560 729 aa13.48□□□□□ -0.25
YIPF3-203ENST00000416380 ZSWIM3Q96MP5 696 aa13.48□□□□□ -0.25
YIPF3-203ENST00000416380 CORO1BQ9BR76 489 aa13.48□□□□□ -0.25
YIPF3-203ENST00000416380 DUSP16Q9BY84 665 aa13.48□□□□□ -0.25
YIPF3-203ENST00000416380 STK33Q9BYT3 514 aa13.48□□□□□ -0.25
YIPF3-203ENST00000416380 RBSNQ9H1K0 784 aa13.48□□□□□ -0.25
YIPF3-203ENST00000416380 EPS15L1Q9UBC2 864 aa13.48□□□□□ -0.25
YIPF3-203ENST00000416380 CYTH4Q9UIA0 394 aa13.48□□□□□ -0.25
YIPF3-203ENST00000416380 KIAA1257Q9ULG3 409 aa13.48□□□□□ -0.25
YIPF3-203ENST00000416380 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.48□□□□□ -0.25
YIPF3-203ENST00000416380 USTQ9Y2C2 406 aa13.48□□□□□ -0.25
YIPF3-203ENST00000416380 PCDHB4Q9Y5E5 795 aa13.48□□□□□ -0.25
YIPF3-203ENST00000416380 A0A1W2PQC6 194 aa13.47□□□□□ -0.25
YIPF3-203ENST00000416380 ANHXE9PGG2 379 aa13.47□□□□□ -0.25
YIPF3-203ENST00000416380 F8VZ95 297 aa13.47□□□□□ -0.25
YIPF3-203ENST00000416380 LRG1P02750 347 aa13.47□□□□□ -0.25
YIPF3-203ENST00000416380 ZDHHC11BP0C7U3 371 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms