RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 SP100P23497 879 aaPredicted RBP15.53■□□□□ 0.08
LIMS1-206ENST00000414829 NTHL1P78549 312 aa15.53■□□□□ 0.08
LIMS1-206ENST00000414829 DDR2Q16832 855 aa15.53■□□□□ 0.08
LIMS1-206ENST00000414829 ZSCAN23Q3MJ62 389 aa15.53■□□□□ 0.08
LIMS1-206ENST00000414829 MIIPQ5JXC2 388 aa15.53■□□□□ 0.08
LIMS1-206ENST00000414829 FUKQ8N0W3 1084 aa15.53■□□□□ 0.08
LIMS1-206ENST00000414829 PDZD8Q8NEN9 1154 aa15.53■□□□□ 0.08
LIMS1-206ENST00000414829 SLC2A14Q8TDB8 520 aa15.53■□□□□ 0.08
LIMS1-206ENST00000414829 GIPC2Q8TF65 315 aa15.53■□□□□ 0.08
LIMS1-206ENST00000414829 MRPS31Q92665 395 aaKnown RBP15.53■□□□□ 0.08
LIMS1-206ENST00000414829 E2F7Q96AV8 911 aa15.53■□□□□ 0.08
LIMS1-206ENST00000414829 ELMO3Q96BJ8 720 aa15.53■□□□□ 0.08
LIMS1-206ENST00000414829 CYFIP2Q96F07 1278 aa15.53■□□□□ 0.08
LIMS1-206ENST00000414829 NECAB3Q96P71 396 aaPredicted RBP15.53■□□□□ 0.08
LIMS1-206ENST00000414829 SLITRK6Q9H5Y7 841 aa15.53■□□□□ 0.08
LIMS1-206ENST00000414829 FAM49BQ9NUQ9 324 aa15.53■□□□□ 0.08
LIMS1-206ENST00000414829 HESX1Q9UBX0 185 aa15.53■□□□□ 0.08
LIMS1-206ENST00000414829 NME7Q9Y5B8 376 aa15.53■□□□□ 0.08
LIMS1-206ENST00000414829 VCANP13611 3396 aa15.52■□□□□ 0.08
LIMS1-206ENST00000414829 SLC38A8A6NNN8 435 aa15.52■□□□□ 0.08
LIMS1-206ENST00000414829 F8VP50 259 aa15.52■□□□□ 0.08
LIMS1-206ENST00000414829 CCDC130P13994 396 aa15.52■□□□□ 0.08
LIMS1-206ENST00000414829 ZNF18P17022 549 aa15.52■□□□□ 0.08
LIMS1-206ENST00000414829 GABRR2P28476 465 aa15.52■□□□□ 0.08
LIMS1-206ENST00000414829 RAD23BP54727 409 aa15.52■□□□□ 0.08
LIMS1-206ENST00000414829 MTMR3Q13615 1198 aa15.52■□□□□ 0.08
LIMS1-206ENST00000414829 KRT31Q15323 416 aa15.52■□□□□ 0.08
LIMS1-206ENST00000414829 SLC5A9Q2M3M2 681 aa15.52■□□□□ 0.08
LIMS1-206ENST00000414829 ZNF394Q53GI3 561 aa15.52■□□□□ 0.08
LIMS1-206ENST00000414829 SGO2Q562F6 1265 aa15.52■□□□□ 0.08
LIMS1-206ENST00000414829 HSP90AA4PQ58FG1 418 aa15.52■□□□□ 0.08
LIMS1-206ENST00000414829 ARHGAP17Q68EM7 881 aa15.52■□□□□ 0.08
LIMS1-206ENST00000414829 TMEM270Q6UE05 265 aa15.52■□□□□ 0.08
LIMS1-206ENST00000414829 RNF135Q8IUD6 432 aa15.52■□□□□ 0.08
LIMS1-206ENST00000414829 UBALD2Q8IYN6 164 aa15.52■□□□□ 0.08
LIMS1-206ENST00000414829 ITFG1Q8TB96 612 aa15.52■□□□□ 0.08
LIMS1-206ENST00000414829 WHAMMQ8TF30 809 aa15.52■□□□□ 0.08
LIMS1-206ENST00000414829 OVCA2Q8WZ82 227 aa15.52■□□□□ 0.08
LIMS1-206ENST00000414829 SLITRK1Q96PX8 696 aa15.52■□□□□ 0.08
LIMS1-206ENST00000414829 MYADMQ96S97 322 aa15.52■□□□□ 0.08
LIMS1-206ENST00000414829 CRACR2AQ9BSW2 395 aa15.52■□□□□ 0.08
LIMS1-206ENST00000414829 FUCA2Q9BTY2 467 aa15.52■□□□□ 0.08
LIMS1-206ENST00000414829 TTLL2Q9BWV7 592 aa15.52■□□□□ 0.08
LIMS1-206ENST00000414829 ATXN3LQ9H3M9 355 aa15.52■□□□□ 0.08
LIMS1-206ENST00000414829 FBXO44Q9H4M3 255 aa15.52■□□□□ 0.08
LIMS1-206ENST00000414829 CSNK1G1Q9HCP0 422 aa15.52■□□□□ 0.08
LIMS1-206ENST00000414829 LIMA1Q9UHB6 759 aaKnown RBP15.52■□□□□ 0.08
LIMS1-206ENST00000414829 SORCS3Q9UPU3 1222 aa15.52■□□□□ 0.08
LIMS1-206ENST00000414829 PCDHB4Q9Y5E5 795 aa15.52■□□□□ 0.08
LIMS1-206ENST00000414829 A0A1W2PRU2 124 aa15.51■□□□□ 0.07
LIMS1-206ENST00000414829 LGALS16A8MUM7 142 aa15.51■□□□□ 0.07
LIMS1-206ENST00000414829 DCXO43602 365 aa15.51■□□□□ 0.07
LIMS1-206ENST00000414829 LRRN2O75325 713 aa15.51■□□□□ 0.07
LIMS1-206ENST00000414829 VDRP11473 427 aa15.51■□□□□ 0.07
LIMS1-206ENST00000414829 CD19P15391 556 aa15.51■□□□□ 0.07
LIMS1-206ENST00000414829 HMGA1P17096 107 aaKnown RBP15.51■□□□□ 0.07
LIMS1-206ENST00000414829 NPR3P17342 541 aa15.51■□□□□ 0.07
LIMS1-206ENST00000414829 CEBPBP17676 345 aa15.51■□□□□ 0.07
LIMS1-206ENST00000414829 PON1P27169 355 aa15.51■□□□□ 0.07
LIMS1-206ENST00000414829 BCAT1P54687 386 aa15.51■□□□□ 0.07
LIMS1-206ENST00000414829 NFKBIBQ15653 356 aa15.51■□□□□ 0.07
LIMS1-206ENST00000414829 PTPN21Q16825 1174 aa15.51■□□□□ 0.07
LIMS1-206ENST00000414829 CCDC142Q17RM4 750 aa15.51■□□□□ 0.07
LIMS1-206ENST00000414829 FILIP1LQ4L180 1135 aa15.51■□□□□ 0.07
LIMS1-206ENST00000414829 NUP93Q8N1F7 819 aa15.51■□□□□ 0.07
LIMS1-206ENST00000414829 UBR7Q8N806 425 aa15.51■□□□□ 0.07
LIMS1-206ENST00000414829 SLC4A11Q8NBS3 891 aa15.51■□□□□ 0.07
LIMS1-206ENST00000414829 SHKBP1Q8TBC3 707 aa15.51■□□□□ 0.07
LIMS1-206ENST00000414829 TWNKQ96RR1 684 aa15.51■□□□□ 0.07
LIMS1-206ENST00000414829 LRRC3Q9BY71 257 aa15.51■□□□□ 0.07
LIMS1-206ENST00000414829 UBE2TQ9NPD8 197 aaPredicted RBP15.51■□□□□ 0.07
LIMS1-206ENST00000414829 TAB2Q9NYJ8 693 aa15.51■□□□□ 0.07
LIMS1-206ENST00000414829 MAGED2Q9UNF1 606 aaPredicted RBP15.51■□□□□ 0.07
LIMS1-206ENST00000414829 MTCL1Q9Y4B5 1905 aaKnown RBP15.51■□□□□ 0.07
LIMS1-206ENST00000414829 NCANO14594 1321 aa15.5■□□□□ 0.07
LIMS1-206ENST00000414829 LRRC10BA6NIK2 292 aa15.5■□□□□ 0.07
LIMS1-206ENST00000414829 ANHXE9PGG2 379 aa15.5■□□□□ 0.07
LIMS1-206ENST00000414829 GOLGA6L19H0YKK7 550 aa15.5■□□□□ 0.07
LIMS1-206ENST00000414829 CLDN5O00501 218 aa15.5■□□□□ 0.07
LIMS1-206ENST00000414829 MED7O43513 233 aa15.5■□□□□ 0.07
LIMS1-206ENST00000414829 ECI2O75521 394 aa15.5■□□□□ 0.07
LIMS1-206ENST00000414829 SETSIPP0DME0 302 aa15.5■□□□□ 0.07
LIMS1-206ENST00000414829 KRT5P13647 590 aa15.5■□□□□ 0.07
LIMS1-206ENST00000414829 ADORA2BP29275 332 aa15.5■□□□□ 0.07
LIMS1-206ENST00000414829 WEE1P30291 646 aa15.5■□□□□ 0.07
LIMS1-206ENST00000414829 GPR15P49685 360 aa15.5■□□□□ 0.07
LIMS1-206ENST00000414829 ORC1Q13415 861 aa15.5■□□□□ 0.07
LIMS1-206ENST00000414829 NCAPHQ15003 741 aa15.5■□□□□ 0.07
LIMS1-206ENST00000414829 MEA1Q16626 185 aa15.5■□□□□ 0.07
LIMS1-206ENST00000414829 PHLDB3Q6NSJ2 640 aa15.5■□□□□ 0.07
LIMS1-206ENST00000414829 RRAGAQ7L523 313 aa15.5■□□□□ 0.07
LIMS1-206ENST00000414829 FMNL3Q8IVF7 1028 aa15.5■□□□□ 0.07
LIMS1-206ENST00000414829 ARHGEF19Q8IW93 802 aa15.5■□□□□ 0.07
LIMS1-206ENST00000414829 HS6ST3Q8IZP7 471 aa15.5■□□□□ 0.07
LIMS1-206ENST00000414829 C12orf29Q8N999 325 aa15.5■□□□□ 0.07
LIMS1-206ENST00000414829 RBBP8NLQ8NC74 664 aaPredicted RBP15.5■□□□□ 0.07
LIMS1-206ENST00000414829 STKLD1Q8NE28 680 aa15.5■□□□□ 0.07
LIMS1-206ENST00000414829 ING5Q8WYH8 240 aa15.5■□□□□ 0.07
LIMS1-206ENST00000414829 SMARCD2Q92925 531 aa15.5■□□□□ 0.07
LIMS1-206ENST00000414829 TASP1Q9H6P5 420 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms